Semicossyphus pulcher (California sheephead): 138600967
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Entry
138600967 CDS
T10596
Name
(RefSeq) phospholipid-transporting ATPase ABCA1
KO
K05641
ATP-binding cassette, subfamily A (ABC1), member 1
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul02010
ABC transporters
spul04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
138600967
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
138600967
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
spul02000
]
138600967
Transporters [BR:
spul02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA1, 2, 3, 4, 7, 12, 13 subgroups
138600967
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
R1_ABCA1
AAA_21
AAA_15
DrrA1-3_C
AAA_23
Motif
Other DBs
NCBI-GeneID:
138600967
NCBI-ProteinID:
XP_069528634
LinkDB
All DBs
Position
Unknown
AA seq
2262 aa
AA seq
DB search
MGLLTQFTLLLWKNFTLRKRQKVRLVVELVWPLFLFFILVWVRSTTQPIYKGQCHYPNKA
MPSAGVLPWLQGMVCNVNNPCLNYPTPGETPGQVNNFNNSIIAGMLIEMQALLVDRSILS
KAQLLAGDLEQWSSVLSQSNPGNAQPVILRTMLRDNETFTTHLEQNLSVPPAVIESLLKA
EIKLNPMTGVAGPGSLRSILCEGTDLDQYVQFSSQAEKEAFQNVSCSLTAQQLINTRQVF
LRNLDRRRVLSELPSALDLNAVDTATLMGKTTQDALPVLEEVARLQNSMIFQAATSLDFQ
NNMFGSVNMLMCGGLSDLNSSNISVSSLSSGQTAYNTLFSSMGNSSDGFCQTLVDTLEGT
PGLRYIWSTFKPLLQGKVLYAPDTPAARLIVKEANSTFNALAMLKELADSWEELGPRVWD
FLESSPQVNAMRALLGNPLFAAALDQRLDGPAWTPEQLANFLYNGPPEDRPPGMPSRDWR
DVYNTTTQIMKLLSNFLSCLDLNKFEASPNETHLVTKALEHLDNDTFWAGIVFENLQPKS
SQPPPYVKYKIRMDIDEVEQTTKLNEGSWSPGARDNSFNDLRYIWGGFSYLQDMMDHGII
RAQTSKTQPLGVFAQQMPYPCYVDDGFIQNIGGILPMFLVLAFMYTVCMTIKGLVLEKEL
RLKEVLRAVGIRNGALWSSRFLENIVLLTVPCALMCVMVKYGKVLQYSDPSVIFVFLLVF
CVSTIAQCFFISVFFSKANLAAACGGLIYFVLYLPHVLCYAWRDVMGFGVKVAVSLLSCV
AFGYGCENFAKYEVQGIGIHWHNINKSPEEGDRYTFIVSILMMLFDAAIYWMLTWYIENV
FPGQYGIPKPWYFPFTKSYWCGTASEIQSDPDLLKDSAHNAYLEKPPPDMKAGVSIRNLV
KIYKTGKKLAVDGLSMDFYENQITSFLGHNGAGKTTTMSILTGLFPPTSGTALINGYDIH
TDMDSIRMYLGMCPQHNVLFNELTVEEHIYFYSRLKGRSKEEVKMEMDQMIKDVGLPHKR
KDLAKNLSGGMQRKLSVAIAFVGGSKIVILDEPTAGVDPYARRGIWELLLKYKQGRTIIL
STHHMDEADILGDRIAIISHGKMRCCGSSLFLKKSFGSGYYLTLVRDRTEKMTAQRNGII
HRQGKEERDIPSRGGSLDDGIGTESESSISDPSDLTAVGQLVRRHVPEAAFLESIGQEIT
YILPYGGARDGTFALLFKELDLAMADLGLTSYGISDTTLEEIFLKVAEDTGVDAEITSNL
NWVRPETTYLICIPTATKELLVRGRSSRGSKRNSKASVHSKTGVKGMTELKEKITSKVED
SKRNASVSGRGSSVVTGWRLIRRQFLALFIKRFHNARRSRKGLIAQVILPAAFVCLSLIF
SLIVPPFTEYPNLELQPWMYGLPQTTFYSNDMPANAEVSQVVETLVNTPGFGTRCMDGDP
IPKFPCSSTGSDWFTPPVDQSITDIFLNGNWSMSNPSPSCQCSTPKRTIMLPDCPPGAGG
LPPSQRIQNTTDTLLDLTGRNMTDFLIKTFEHSGKTRYGGISVGAVNSQVRLTEAAIEAA
FKDLGDLFNSSQDNVTDQIFPKAETLLKKLGTKNSVKVWFYNQAWHGMASFLSVANNAIL
RGNLPPGQDPHRYGIAVSNHPLNLTKAQLSYVALATTSTDVVVSICVIFAMSFIPASFVL
FLIQERVTKAKHLQFVSGVNPAVYWLANLAWDMCNYIVPCLIVIVIFLCFQQESYVSPPN
LPALILLLLLYGWSITPMMYPASFIFSVPSTAYVVLTCLNLFIGINGSVATFVMELFDDD
NVSRINDVVKQVLLIFPHFCLGRGLMDMAKNQAMGTLFSSLGEDRFEDPLSWDMVGKNLC
AMFIQGVVMFAFTLLIQYKFFCKSRLIKGKSLSAEEEDVDVARERERVYDGRANDDLLRI
CDLTKVYPRKSTPAVDRLCVGVPAAECFGLLGINGAGKTTTFKMLTGDIPVSSGEAFLNG
YSIRTEMRDVNQNMGYCPQFDAIDDLLTGREHLEFYARLRGVPEKEITMVAEWGIQKLGL
VKYSNKSAGTYSGGNKRKLSTAIALIGCPPVIFLDEPTTGMDPKARRFLWDCILSIIKEG
RSVVLTSHSMEECEALCTRMAIMVNGRFKCFGSIQHLKNRFGDGYTVIVRVGGSSPALKP
VEEFVQQTFPGSVLKEKHHNTLQYQLPYAQGALANIFSQFTSHQQRLSVEDYSVSQTTLD
QVFVNFARHQHGENDSQAYDNPVDTSDELPLESVKTIQEETV
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atgggtctcctgacgcagttcactctcctcctgtggaagaacttcactctccggaagaga
caaaaggtgcggctggtcgttgagctggtatggcctctgtttctcttcttcattctggtg
tgggtgcgctccaccactcagccgatttacaaaggccaatgccactacccaaataaagcc
atgccgtcggctggcgtgctgccctggcttcaagggatggtgtgtaacgtcaacaatccc
tgtttgaactacccgacgccgggggagacaccaggccaagtcaacaacttcaacaactcc
ataattgcagggatgctcatcgagatgcaagccctcctggtggacagatccattctcagc
aaggctcagctgctggcgggcgaccttgaacagtggtcttcagtcctgtcacagtctaac
cctggtaacgctcaacctgtgatcctaagaactatgctcagagacaatgaaaccttcacc
acccacctggaacagaatttgtccgtgccaccagcggtgatcgagagcctccttaaagcc
gagataaaactcaatccgatgacgggcgtcgcggggccaggcagcctgaggagcatcctg
tgcgaggggacagatctggatcagtatgtccaatttagcagccaagccgaaaaggaggct
tttcaaaatgtcagctgctccctgacggcgcagcagctgattaacacccggcaagtgttc
ctgcggaacctggacaggaggagggtgctctctgagcttccttcagctttggatctgaat
gcagtagacacagcgacactgatggggaaaactacgcaagatgccttaccggtgttggag
gaggtggcgaggttgcagaactccatgatcttccaggctgcgacttcattggatttccaa
aacaacatgtttggcagtgtgaatatgctaatgtgtggaggactgtcggacttaaattcc
tctaacatatccgtcagttcactctcatctggacagacggcttacaacaccctattttcc
agcatgggcaacagttcagatggtttttgtcagactcttgtcgacaccctggagggcaca
cctggcctgcgctacatttggagcaccttcaagccgttactgcaagggaaagtcctctac
gcacctgatacacctgctgctcgcctcatcgtgaaggaggcaaatagcacattcaacgcc
ttggctatgctgaaagagctggctgattcgtgggaagagctggggccacgtgtttgggac
ttccttgaaagtagccctcaagtcaacgcaatgcgggctttgctggggaatccactgttt
gctgccgcccttgaccagcgtctcgacggccccgcatggacgcccgagcagctggccaac
ttcctgtacaacgggcctcccgaggaccgtcctcccggcatgccttcccgcgactggcga
gacgtctacaacaccaccacccaaatcatgaagctcctctccaacttcctcagttgttta
gacctgaataagttcgaggcgtcccccaatgaaacccatctggtgaccaaagcactggag
catctggataatgatacattctgggctggtattgtatttgaaaacctccaacctaaatcc
agccaaccccctccttacgtcaaatacaaaatccgcatggacatcgatgaggtagagcaa
accaccaaattgaatgaggggtcttggtctcctggggcccgagacaactcctttaacgac
ctgcgctatatatggggaggcttctcctacctgcaggatatgatggaccacggcattata
cgagcgcagacatccaagacccaacccctcggtgtttttgcccagcaaatgccatatccc
tgctacgtggatgacggcttcatccagaatattggaggcatcctccccatgttcctggtg
ctggccttcatgtacaccgtgtgcatgaccatcaaaggcctggtgctggagaaggagctc
cggctcaaggaggtgctgcgtgccgtcggcattcgaaacggcgccctttggtcttccagg
ttcttagaaaacatagtgctgctcacagttccctgtgcgctcatgtgtgtcatggttaag
tacggcaaagtcctgcagtacagcgacccctctgtcatcttcgtcttcctgctggtgttc
tgcgtgtccaccatcgctcagtgcttcttcattagcgtcttcttctctaaggccaactta
gcggcggcgtgcggcggcctcatctacttcgtcctctacctgccgcacgtcctctgctac
gcctggagggacgtcatgggtttcggggtcaaggtcgctgtgagtttattgtcatgtgtg
gcctttggctatggctgcgagaacttcgccaagtatgaggtgcaaggcatcggcattcat
tggcacaacataaacaagagtccagaagagggagaccgctacaccttcatcgtgtccatc
ctcatgatgctctttgatgctgctatttactggatgctcacctggtacatcgaaaatgtc
ttcccagggcaatatggaatcccaaagccgtggtacttccctttcaccaagtcttattgg
tgcgggacggcctccgagatccagtctgaccccgacctgctgaaagactctgcacacaac
gcgtatcttgagaagccaccgcccgatatgaaggcgggggtctcaatccgcaatcttgtt
aagatctacaagacgggaaagaagctggctgtggacggactgagcatggacttctacgag
aatcagatcacatcttttctcggccacaatggagccggaaaaaccaccacaatgtcaatt
ctaacgggactcttcccgcctacatctggaaccgctctcatcaacggctacgacatccac
accgacatggacagcatccggatgtacttgggaatgtgcccgcagcacaacgtcttattc
aatgagctgacagtggaggagcatatctacttctactccaggctgaaaggacgcagcaaa
gaagaggtgaaaatggagatggaccagatgattaaggatgttggtttaccacataagcgg
aaggatctcgctaagaacctgtcaggtggcatgcagaggaagctgtccgttgctatagcg
ttcgtcggcggctcgaaaatcgtcatcttggatgaacctaccgcaggagtggacccctac
gcccgcaggggtatctgggagttgctgttaaagtacaagcaaggtcgcaccatcattttg
tctactcaccacatggacgaggcagatatcttaggtgaccgcattgccatcatctcccac
ggaaagatgcgctgctgcggctcctcgctcttcctgaagaaatctttcggcagcgggtac
tacctcactctggtccgagacaggactgagaagatgacggctcagcgtaatggtatcata
cacagacagggtaaagaggagagagatattccttcgaggggaggcagcctggatgacggc
atcggtaccgagagcgagagcagcatctccgacccctcagacttgacagctgtgggtcaa
ctagtgcggcgccacgtccccgaggcggccttcttggagagcatcggtcaggagatcacc
tacatcttgccttatggtggagccagagatgggacctttgctctgctcttcaaagagctc
gacctggccatggctgacctcggcctgaccagctacggcatctctgacaccacgctggag
gagatatttctcaaagtggcagaagacacaggagtggacgcagaaataacaagtaaccta
aattgggtcaggccagaaacaacatatcttatttgtattcccacagcaacaaaggagctg
ttggtgagaggaaggagctcacgcggatccaagcggaacagcaaagccagcgtccacagt
aaaacaggagtcaaaggaatgacggaactgaaggaaaaaatcacaagcaaagtggaagac
tcaaagaggaacgccagcgtcagtgggaggggatcctcggtcgtcaccgggtggaggcta
atcaggaggcagttcctggcgctcttcatcaagcgcttccacaacgcccggaggagccgc
aagggactcattgcccaggtgatcttgcctgctgccttcgtctgcctctctctgatcttc
tcgctcatcgtcccaccgttcaccgaatatcccaatttggagctgcaaccctggatgtac
ggtctgcctcaaaccaccttttacagcaatgacatgccagctaatgcggaggtgtctcag
gtggtggaaaccttggtgaacacgcctggctttggaacgcgctgcatggatggagaccca
ataccgaagtttccctgttcttccactggctctgattggttcacaccacctgtggatcag
tccatcactgacatcttcctcaatggcaactggagcatgtcaaacccctccccctcctgt
cagtgcagcacgcctaagcggacgatcatgttgccagactgtccacctggagcagggggg
ctccctccgtctcagaggatccagaacacaaccgacacactgctggatttaactggaagg
aacatgaccgacttcttgatcaagacttttgaacactctggtaaaacaaggtacggcggc
atctctgtcggagcggtcaactcccaagtccgtctgaccgaggcggcaatcgaagccgca
ttcaaggatctcggagacctattcaattcatctcaagataacgtgaccgatcagatcttc
ccgaaggccgagacgctgctgaagaagctggggaccaagaacagtgtaaaggtgtggttc
tacaaccaggcatggcacggcatggcgtccttcctcagcgtggccaacaacgccatcctg
agggggaatctgccgccaggacaggatccccaccggtacggcatcgctgtgtccaatcac
cctctgaacctcaccaaggcgcagctctcctacgttgcactggccacaacttccaccgac
gtggtggtgtccatctgcgttatctttgccatgtccttcatcccggccagctttgtcctc
ttcctcatccaggagagggtgaccaaagccaagcacctgcaatttgtcagtggagtgaac
ccggctgtctactggttggctaacttggcctgggacatgtgtaactacatcgtcccgtgc
ttgatcgtcatagtgatcttcctctgcttccaacaagaatcctatgtctcacctcctaac
ctgcccgctttgattctgctgctccttttgtatgggtggtccatcacccccatgatgtac
cccgcctccttcatcttcagcgtgcccagcacagcctacgtggtgctcacctgcctcaac
ctcttcatcggtatcaacggcagcgtggccacctttgttatggagctctttgatgatgat
aatgtgtcccgcatcaatgacgttgtgaagcaggtgctgctgatattcccacacttctgt
ctgggcagagggctaatggacatggcaaagaaccaggcgatgggcaccctcttcagcagt
cttggggaagaccgtttcgaggatccactcagctgggacatggtgggaaagaacctttgc
gccatgttcatccagggagtcgtcatgtttgcgtttacgcttctcatccagtataagttc
ttctgcaaatcgaggctgattaaagggaagtcattatctgcagaggaagaggatgtcgat
gtagcccgagaacgtgagcgggtgtatgacggcagggccaacgatgaccttctgcggatc
tgtgacctcactaaggtgtacccccggaagagcacccctgctgtggacaggctatgtgta
ggcgtacctgccgcagagtgtttcggcttgctgggaatcaacggggctggaaaaaccacc
acgtttaagatgctgacaggagacatcccagtctccagtggagaggccttcctaaatgga
tacagcatacgaacagagatgagggacgtgaaccagaacatgggctactgtccgcagttt
gatgccatcgacgacctgctgactgggcgggagcatctggagttttacgccaggttacga
ggggtaccggagaaagagatcaccatggttgccgaatgggggatccagaaattgggcctg
gtcaaatattccaacaagtcagcgggaacgtacagcggcgggaacaaacgcaaactctcc
acggcgatcgccctcatcggctgtcctccggtgattttcctggatgagccaaccactggg
atggaccccaaagcccggcgcttcctgtgggactgcatcctgagcatcatcaaagaggga
cgctctgtcgtcctcacatcacacagcatggaggaatgtgaggctctgtgcacacgcatg
gccatcatggtaaacgggcgcttcaagtgttttgggagcatccagcatctgaaaaacaga
tttggtgatggctacacagtgattgtgagggttggtggctcttctcctgcgctgaagcca
gtcgaggaattcgtccagcagaccttcccaggcagcgtcctgaaggagaagcatcacaac
acactgcagtaccagctcccgtacgcgcagggagccctggccaacatcttcagccagttc
accagccatcagcagaggctgagcgtggaagactactctgtgtcccagaccactctggat
caggtctttgtgaattttgcgagacaccagcatggagaaaatgactctcaggcctatgac
aacccagtggacacttcagatgagctgccattggagtctgtgaagaccatccaagaagag
acggtgtaa
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integrated database retrieval system
