Semicossyphus pulcher (California sheephead): 138601053
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Entry
138601053 CDS
T10596
Symbol
frem1a
Name
(RefSeq) FRAS1-related extracellular matrix protein 1a
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04512
ECM-receptor interaction
Brite
Lectins [BR:
spul04091
]
C-Type lectins
Lecticans
138601053 (frem1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138601053
NCBI-ProteinID:
XP_069528728
LinkDB
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Position
Unknown
AA seq
2174 aa
AA seq
DB search
MAPQGHTLAWTLLPVLLLGVTCSSHGSLVKVNKGLKVKRGQAAYLQEGDLQFLIPRQKDA
CKVEVVLNEPITQRVGKLTPQVFDCHYLADEVKYVHNGCPLLKEDTVKLRLYRFTETETF
MEVFSLHVDIMEPECSIIKLGPKALEVPEFYGLSDAVDGNVVSFNYERRSSLECSIHLSN
HDTHLPAHGQLVTGEPEKATKRGDEPESFIPLRQQLDNKERAMCKSEGCLKGLKLVKFTK
IPCDDFLMMGLKYQHIEPPSPDVDYIAIRLDLKDTRSGSIYESEQAWIPVRIIGAVPNQP
PKPSFMSMFILEVDQFILTPLSTATLDAEDEETPKQLLVFNITKPPVDGFITHLTDHTRP
ISSFTWLDLNDMLIGYQPPNSSHTQRRNYEVEVEVHDFFFEKSQSMTVHMSVRNADTNAP
RVSWNMGLSLLEGQSRPILWEQLQIVDNDNLNAVRLITVDGLQHGRLTVRGGKGFMFTVK
DIKAGVVRYHHDDSDSTKDFVIFRITDGPHQTRHKFPIKILPKDDSPPFLITNMLLEVSE
GQTALLRGSTLQASDMDSSDDYILFNITRPPQAGEVMKLPGPGLTGYPVGHFLQKDLSQS
MVYYRHLGNEVFDDSFEVVLSDFHDPPNLSEPQVVVVHIEPVPDQPPKEVPGSSRCLVIK
ETEVVHLTRQQLHFVDQEAPDSELTYTVTTPPFYAGPHSSPDAGRLFLVDSIPKFTKDPN
APVLRLFTQHAVNFMKVAYMPPIMDIGPYPQYIQLVLSVTNHLGKTVTGICFNITVVPVD
NQPPQVITNRLTVDEGGEGWIGPEHLLLSDVDSMEEVLQVELQREPQHGALQLGGLPLKP
GQTFTVRDLRSLKVRYAHDGSETLEDNIEFTATDGKNPVSFILHVQVMPINDEVPVLVPG
LKAVLTCLEGQEIIITAEYIYATDADSDNSSLAFMIARQPYHGVVLRSGVIVDRFVQADI
TAGIISYKHTGLEIGLTPRHDTITFVISDGESENFGLCCGEGKTSRTRGTPRDSLPVYDL
QITVFPVDSQPPSLTTGDMFTVDEGGSAPVTTSHLKASDVDTLLDELVVSLISPPQFGYI
ENVLPSPGFEKSNTGISIASFSYKDIMDGHVNYVQSRHQRMEPTADQFMLSVSDGRHSSA
HVPFYIIINPTNDETPEFVARNITVREGEMKQLDSSVIRAMDLDVPQNVLLFSVVGPPQH
GSIISHRREKTGHRRREPGPPVSVVDFTMTDLSDGMDVMYLHDDSENMDDTFTLQLTDGR
HKLHRQVMVKVLPVNDEEPRVIRNNGLEVEPGEARLISSVCLFAEDGDTPSSEVKYVFES
VPAQGLLQLKEGHDWVTLTAGRNCTQETVDMNLLRYVHTELHGAETHDFFVFYLSDGKNR
SPPQHFHISIRDLEKGNIAVFAKPVNVNRGDRVVLTTDVLLATDGTDKPEELLYVITHPP
AHGHVEYIKHPGLSISTFSQMDIAANLVAYVHDNRASSPTETFQFVVSNGKTSRNGTFEI
SVEMVDRVLPSLTSNTGLSVPQGSSMLLSPDRLTLSDPDTPPSALTFVLLQPPQYGSLLL
GGRALTAGANFTQRDVQELEVTYKHDGGPSQIDRFAFSASDSSHRGFLVDGRLQSAPVFF
TIQIKPLDKSSPDVVKLLPLWKAELLDDGRYGIFLSSRGLKAEDSDSRDEELIFCIVRQP
YFGYLENITTGGFVPQRFPQTELNKRSIVYIINPDRESLSDSVEFTVSDPLGNTGPSHTL
EFGWSIVDLSQQQLSVCEDRRTVSLDITRRGNLAESSYVTVKVKEVTATAGKDFLFSPSS
LIQFDPGVSKRTWQTEITQDHLEEAEEVFEVLLVSPEGTVIGRTDKTQVTIRDSGRCRLN
PNREAPVLVGKEVRSDSYPEHGSIQLEKLPLGTESGVIWSRGDNIPRPAKDVTKKKLKVR
SNPKTIAPSSVFHNGTDVVYTYHGIMQMQVEDDTSPSRRGRKANIRVVSRGAQQQAAVDP
QRKISKPPKTGPIKTHGTADNSISKPCVPELMGLLHFNQTTNQLFHCNGVSWKPWAPTDQ
MVGAQRCPQGWTFHGGHCYILSTENKVTWSTANRACRERYKGTLASVLSKADMDWMWDFS
GRKPFWIGLNDREGRGRWEWAGGEPVSYTNWRKTPPRSKMKGNKKCVLVWRRAKWQIRDC
KTSRGHRFVCSVKT
NT seq
6525 nt
NT seq
+upstream
nt +downstream
nt
atggctccacagggtcacacgctggcctggactttgcttccggtgcttctgctgggagtg
acctgctcatcacacggttcccttgtgaaagttaataagggcttaaaggtgaagcgaggc
caggcagcctacctccaggagggcgacctgcagttcctaatcccccgtcagaaggacgcg
tgcaaggtggaggtggtgttaaatgagccaataactcaacgagtgggaaaactcacgcct
caggtgtttgattgccactatctggctgatgaggtaaaatacgtccacaacggctgtccg
ctgttaaaggaggacactgtgaagcttcgactgtacaggttcaccgagacagagaccttc
atggaggtcttttctctccatgtcgacattatggagcctgaatgcagcatcataaagctg
gggccaaaagccctggaggtccccgagttctacggcctctctgatgctgtggacggcaat
gtggtgtccttcaactacgaaaggaggtccagcctggagtgtagcatccatctgagtaac
catgacacccacctgccggctcatggccaactggtcaccggagagccggagaaggctacg
aagagaggggacgagccggagagctttattccccttcgtcagcagcttgataataaagaa
agagcgatgtgtaagtctgaaggctgcctgaagggtctgaagttggtaaagttcaccaaa
attccctgtgatgacttcctgatgatggggctgaagtatcagcacatcgagcctccatca
ccagacgtggactacatcgctatcagactggacctcaaggacaccaggagtggcagcatc
tatgagtctgaacaggcctggattccagtgcggatcatcggtgcggtgcccaaccagcct
cccaaaccgtccttcatgtccatgttcatcctggaagtcgaccagttcatcctcacgccg
ctctccaccgccacgctggacgcggaagacgaggaaacgcccaaacagcttttggttttc
aacatcaccaaaccccccgtcgacggcttcatcacccacctgaccgaccacacccgaccg
atctcctccttcacgtggctcgacctcaacgacatgctcatcgggtatcaacccccgaac
tcctcacatacacaacgcaggaattacgaggtggaagttgaggttcatgactttttcttt
gagaagagccaatcaatgactgttcacatgtctgtaaggaatgcagacaccaatgcaccc
agagtgtcttggaacatgggtctcagtctgttggaggggcagtcccggccaatactgtgg
gagcagctgcagattgtggacaacgacaacctgaatgcagttcgtcttataactgtggac
ggcctgcagcatggacggctcactgtcagaggaggaaagggcttcatgttcacagtcaag
gacatcaaagcgggcgtggtccgctatcaccacgacgacagcgactccaccaaagacttc
gtcatcttccgcatcaccgacggcccccatcagacccggcacaagttccccatcaagatc
ctcccgaaggacgacagcccgccgttcctcatcaccaacatgctgctggaggtgtccgag
ggtcagacggctctgctcagaggctccaccctgcaggcctcagacatggactccagcgac
gactacatcctgttcaacatcacccgccccccgcaggcgggagaggtcatgaagctcccc
gggccgggactcacaggttatcctgtcggccacttcctgcagaaggacctgtctcagtcc
atggtttactatcgacacctgggcaacgaggtgtttgatgactcctttgaggtggtgctg
tcggacttccatgacccccccaacctgtcagagcctcaggtggtggtggtgcacatagaa
ccagtcccagaccaaccaccgaaagaggttcctggttccagccgctgcctcgtcatcaaa
gaaacagaagtggtccatttaacccgccagcagcttcacttcgtggaccaggaggctccg
gacagcgagctcacgtatacggttactactccacctttctacgccggccctcacagcagt
ccggacgcagggaggctgttcttagtcgacagcatccccaaattcaccaaagacccaaac
gcaccggtgctgaggctcttcacacagcatgcagtgaacttcatgaaagtggcctacatg
cctcccatcatggacatcggcccgtacccccagtacatccagttagtcctctctgtaacc
aaccacctgggcaagacggtgacggggatctgcttcaacatcaccgtggtgccggtggac
aaccagccgccgcaggttatcaccaaccgtctgactgtagacgagggaggggagggctgg
atcggacccgagcacctgctgctgtcagacgtggactcgatggaggaagtcctgcaggtg
gagctgcagagggagccgcagcatggagctctgcagctgggaggcctcccgctgaaacca
ggacagaccttcactgtgcgagacctgagaagccttaaagttcggtacgctcacgacggc
tcagaaactttagaggacaacattgaatttacagcaacagacggaaaaaacccagtcagc
ttcatcctgcacgtacaggtgatgcccatcaacgacgaggtcccggtgctggttcctggt
ctgaaagcggttctcacctgtttggagggacaggaaatcatcatcacagccgagtatatc
tacgctacagacgccgacagcgacaacagcagcctggccttcatgatcgcccggcagccg
tatcacggcgtggtgctccggagcggcgtgatcgtcgaccgcttcgtccaagccgacatc
actgcggggatcatcagctacaaacacacaggtctggagatcggcctgactcctcgtcac
gacaccatcaccttcgtcatctctgacggagaatcagaaaacttcggcctctgctgcggt
gaaggaaaaacctccaggaccagagggacgcctcgggacagtctgccggtgtacgacctc
cagatcaccgtgtttcctgtcgacagccaaccaccttcactcacaacaggagacatgttt
actgtggatgaaggcggctccgcccccgtcactacatcccatctgaaggcctctgacgtg
gacacgctgctggacgagctggtggtcagtctcatttctccgcctcagtttggatacatc
gaaaacgtcctgcccagcccgggctttgagaagagcaacacgggcatcagcatcgcttcc
ttctcatacaaagacatcatggacgggcacgtgaactacgtgcagtccagacaccagagg
atggagcccacggccgaccagttcatgctctctgtgtccgacgggagacacagctccgcc
cacgtccccttctacatcatcatcaacccgaccaacgacgagacgccggagttcgtggct
cgcaacatcacagtgcgagagggagagatgaagcagctggactcgtcggtgatacgcgcg
atggacctggacgtccctcagaacgtgctgctcttcagcgtggtcggaccgccgcagcat
ggcagcatcatcagccaccgcagagagaagacgggccacaggagacgggagcccggtcct
ccggtctctgtggtcgacttcacgatgacagatctgagtgacggtatggacgtgatgtac
ctgcacgatgactcagagaacatggacgacacgttcaccctccagctgacagacggcaga
cacaaactccaccgacaggtgatggttaaagtgctgccggtcaacgacgaggagcctcga
gtcatcaggaacaacgggctggaggtggagcccggagaggcccggctcatatccagcgtt
tgtctgtttgcagaggacggagacacgccatcatcagaggtcaaatacgtgtttgagagc
gttcctgcacaaggactgctgcagctgaaggaaggtcacgactgggtgactctgacggcg
gggaggaactgcacccaggagacggtggacatgaacctgctgcgttacgttcacacggag
ctgcacggggccgaaacacacgacttctttgttttctacttgtctgacggaaagaatcga
tcccctccgcagcacttccacatctccatcagagatctggagaaagggaacatcgccgtc
tttgcgaagccggtgaacgtgaaccgtggcgatcgagtcgtcctcaccacagacgtgctg
ttagccacagacggcacagacaaacccgaggagctcctgtacgtcatcactcacccgccc
gctcacggacacgtcgagtacatcaaacaccccggactgagcatctccaccttcagccag
atggacatagcagccaacctcgtggcctacgtgcacgacaaccgagcgagctcacccaca
gaaacctttcagtttgtggtgagtaacggtaagacgagcagaaacggaacctttgagatt
tcagtggagatggtcgaccgcgtcctcccgtctctcacctccaacacaggcctctccgtc
cctcagggctcctccatgctcctgagtccagaccgcctgacactgtctgaccccgacacc
cctcccagcgctctgaccttcgtcctcctgcagccgcctcagtacggcagcctgctgtta
ggaggtagagctctgaccgctggagcgaacttcacccagagagacgttcaggagctggag
gtgacgtacaaacacgacggagggccgtcacagatcgacaggttcgccttttctgcctct
gacagcagccacagaggcttcctggtggacgggcggctacaatcagcacctgtgttcttc
accatacagatcaagcccttggataagtcgtctcctgacgtggtgaagctgcttcctctt
tggaaagctgaacttctagacgacggacgatacgggatcttcctgtcgtctcgagggctg
aaggccgaggacagcgacagccgagacgaggagctgatattctgcatcgttaggcagccg
tactttggttacctggaaaacatcaccacaggaggtttcgtcccgcagcgcttccctcag
acggagctgaacaagagatcgatcgtctacatcataaacccggacagagagtctctctcg
gacagcgtcgagttcaccgtgtccgatcctttagggaacaccggcccctctcacacactt
gagttcggatggtccatcgtcgatctgtctcagcagcagctctctgtgtgtgaggatcgg
agaaccgtctcgctggacatcaccaggagaggaaacttagcagagtcttcatatgtcact
gtcaaggtaaaggaggtgacggctacagctgggaaagatttccttttcagtccttcgtcc
ctcatccagtttgatccaggagtgtcaaagaggacctggcagactgagatcactcaggac
cacctggaggaggcggaggaggtgtttgaggtgctgctggtgtcacctgaaggcaccgtg
atcggacggaccgacaagactcaggtcaccatcagggactcaggacggtgcagactgaac
ccgaaccgtgaggctccagttctcgtcggtaaagaggtccggtctgactcgtacccggaa
cacggatccatccagctggagaagctcccactcgggacagagtctggagtcatctggagc
cgaggagacaacatcccaaggcccgcaaaggacgttaccaaaaagaaactcaaagttcgg
agcaatccaaagactattgcaccttcttcagtgtttcacaacgggacagacgtcgtttac
acgtatcacgggatcatgcaaatgcaagtagaggacgacacctccccatcgaggaggggc
aggaaggcaaacatccgcgtggtgagcagaggagcacagcagcaggcggccgtagaccct
caaagaaagatctccaaacctccaaaaacaggaccaataaaaacacacggaacagctgat
aactccatatccaagccctgtgtgccagaactgatgggactcctgcatttcaaccagacc
accaatcagctcttccactgcaacggggtctcctggaagccctgggcaccaactgatcag
atggtgggtgctcagaggtgtccgcagggctggacctttcatggcggccactgttacatc
ctcagcactgagaacaaggtcacatggagcacagctaaccgagcctgcagggagagatat
aaaggcactctagcgagcgttctctctaaagctgacatggactggatgtgggacttcagc
gggaggaaaccattttggataggcctgaacgaccgggagggccgaggacgctgggagtgg
gcgggcggcgagccggtcagctacaccaactggaggaagacgccgcctcgctccaagatg
aagggcaacaagaagtgcgtcctggtgtggaggagagcaaagtggcagatcagggactgc
aagacgagcagaggacaccgctttgtgtgttcagtaaaaacatga
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integrated database retrieval system
