Semicossyphus pulcher (California sheephead): 138601816
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Entry
138601816 CDS
T10596
Symbol
notch1a
Name
(RefSeq) neurogenic locus notch homolog protein 1
KO
K02599
Notch 1
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
138601816 (notch1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF
hEGF
EGF_TEN
EGF_CA
EGF_2
Ank_2
Ank
Notch
NOD
NODP
Ank_4
Ank_5
Ank_3
EGF_3
EGF_DL_JAG
JAG1-like_EGF2
cEGF
Motif
Other DBs
NCBI-GeneID:
138601816
NCBI-ProteinID:
XP_069529156
LinkDB
All DBs
Position
Unknown
AA seq
2474 aa
AA seq
DB search
MYRFFVKLTFLIPAIVISQGLKCSLPTESCLHGGWCEATSNGNGECKCPSDYVGNRCQYP
SPCSPSPCRNGGECRAISHGNTFDFRCVCRLGFSDRLCLTPTNHACMSSPCRNGGTCDLL
TLTSYRCRCPPGWSGKSCQLANPCASNPCANGGQCSAFDSTYICTCPPAFHGQTCKQDIN
ECAQTPSPCLNGGVCVNEVGSYHCRCPQEYTGQHCETPYLPCSPSPCQNGGTCVQKGDTT
YDCSCLPGFTGPHCEHNIDDCPGHNCQNSGVCVDGVNTYNCQCPPHYTGQFCTENVDECE
LMPNACQNGGTCHDTHGSYHCVCVNGWTGDDCSENIDDCASAACYHGATCHDRVASFFCE
CPHGRTGLLCHLDDACISNPCQKGSNCDTNPVNGKAICTCPPGYTGSACNLDIDECSLGA
NPCEHGGRCLNTKGSFQCKCLQGYEGPRCEMDVNECMSNPCHNDATCLDQIGGFHCICMP
GYEGVFCHINTDECASQPCLNNGKCVDKINSFHCECSKGFSGSLCQVDIDECASTPCKNG
AKCTDGPNKYTCECAEGYSGQHCETDINECYSDPCHYGTCKDGLASFTCYCRPGYTGRLC
ETNINECLSQPCKNGGTCQDRENTYICACPKGTAGFNCEVNLDDCKSKPCDYGRCIDKIN
GYECACEPGYTGAMCNINIDECAINPCHNGGTCVDGINSFTCLCPDGYNDATCLSQVDEC
GSNPCIHGRCQDLINGYKCTCDSGWSGPNCDINNNECESNPCMNGGTCKDMTSGYHCTCR
VGFTGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCLLPYTGENCETLLAPCSPRPCKN
GGVCKESEDYQSFSCICPEGWQGQTCEIDINECVKSPCRNGAICHNTMGGYQCKCQPGYT
GQKCETDTDDCKPNPCSNGGLCRDGINTFTCTCLPGFRGGRCEQDINECESNPCRNGANC
TDCVNSYTCTCPPGFSGINCEINTNDCTDSSCFNGGTCVDGINAFTCLCLPGFTGSYCQY
DINECDSKPCLNGGSCLDSYGTYKCTCPHGYTGVNCQNLVRWCDSSPCKNGGSCWQQGAS
YTCQCQTGWTGLYCDIPSVSCEVAAKRQGVEVAHLCRNSGQCLDAGNTHYCRCQAGYTGS
YCQEQVDECSPNPCQNGAVCTDYLGGYSCECVPGYHGVNCSKEINECQSQPCQNGGTCID
LINTYKCSCPRGTQGVHCEINLDDCTPSTDPLTNEPKCFNNGKCVDRIGGYQCVCPAGYV
GERCEGDVNECLSDPCDPRGSYNCIQLTNSYRCECRTGYTGQRCDKVFDGCKGRPCRNGG
TCAVASNTPHGFICKCPPGFTGSSCEYDSRSCGSLNCRNGGTCVSGHLGPRCLCPPTFTG
PECQTPTDSLCISNPCYNGGTCQITPEVPFFQCSCPSNFNGLLCHILDYSFVGGFGRDIT
PPPEVEVSCEIPQCDEWAGNHICDSLCNNHACGWDGGDCSLNFDDPWQNCSAALQCWRYF
NDGKCDGQCNSPGCLYDGFDCQGQEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLD
CANNMPEKLADGHLVLVVHIPPEQLKNGSSAFLRELSSVLHTNVVFRRDAKGEPMIFPYY
GNEQDLVKHNVLKRSADGWPEWATMPSNVLGQMKESVTAIVSPRKRRELDPLQVKGSVVY
LEIDNRQCYQQSSECFQSATDVAAFLGALASSGNLNVPYIEAVTSVRPTPSGPELYPMYV
VFLGLAALGFICLGVLVSRKRRREHGQLWFPEGFKVSEPSKKKRREPLGEDSVGLKPMKN
SDINLMDDNQNEWEDEDPDCSRFRLEEQAMLDLSDHTDHRKWTQQHLDAADLRIASIAPT
PPQGDIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDPSAEIISDFIYQGANL
HNQTDRTGETALHLAARYARSDAAKRLLESSADANVQDNMGRTPLHAAVAADAQGVFQIL
IRNRATDLDARMHDGTTPLILAARLAVDGMVEELINCHANANATDDSGKSALHWAAAVNN
VEAAMVLLKNGANKDMQDNKEETPLFLAAREGSFETAKVLLEHLANREITDHLDQLPRDI
AQERMHHDIVRLLDEYNVVRSPGLHSGPLSTSSLSPPLCSPNDYLSNLKPALSAKKVRKL
SSGKGGKDGGKGNRMKKNKSLDGKGSLLDTSAVLSPVESLESPHGYLSDVASPPMTSPFQ
QSPPMSLNHLQGNGDSHMGQMMGKDLGCMSFDPNPPRLSHLPVSSPGSQGTTSIGSRGGQ
CDWVSRMHPGVGQQGGFSQAPQMSHNIMGALHGVSTATLSQIMGYQNMQTSHMGSSVHMM
QQAHSRQLQHQNSNSATAGQGLNQSFPNVELSSDMQQNNARSMPIHTVMPQETQILGTQF
LTPPSQHSYSGPMDNTPNHQLQVPDHPFLTPSPGSPDQWSSSSPHSNMSDWSEGISSPPT
SIHSQMNLIPDQFK
NT seq
7425 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtttctttgtgaaactaacatttctgattcctgcgatcgtcatctcacaaggt
ctaaaatgctccctacccactgaatcatgcctgcatggaggatggtgtgaggccacctcc
aatggaaatggagaatgcaagtgtcccagtgactacgtaggaaaccggtgccagtatccg
agtccctgcagcccttcaccctgcagaaacggaggcgaatgccgcgctatttcccatggc
aacacgtttgattttaggtgcgtgtgccgcctgggtttcagcgaccggctatgtctgacc
cccaccaaccacgcctgcatgagctccccatgtcgcaatgggggaacatgcgatctcctt
accctcacttcctaccgctgccgctgcccgcctgggtggtcaggtaaatcctgccagctt
gccaacccatgcgcttcaaatccctgcgccaatggcggccagtgctcagccttcgattcc
acctacatctgcacctgcccgcccgccttccatggtcaaacctgcaagcaagacatcaac
gagtgcgcccagactccctccccctgcctcaacggcggcgtgtgtgtgaacgaggttggc
tcgtaccactgccgctgccctcaagagtacaccggccaacactgcgagaccccctacctg
ccatgcagcccctcgccttgccagaacggcggcacctgcgtgcagaagggagacaccacc
tatgattgtagctgcctgccaggcttcacaggtccgcactgtgagcataacatcgacgac
tgtccaggccacaactgccagaacagtggcgtgtgtgtggatggtgtgaacacctacaac
tgccagtgcccgcctcattacacaggtcaattctgcactgaaaatgtcgacgagtgcgag
ttgatgcccaacgcctgccagaacggaggaacgtgccatgacactcacggcagctaccac
tgcgtctgcgtcaacgggtggacaggtgacgactgcagcgagaacatcgacgactgtgcc
agtgcggcttgttaccacggcgctacctgccacgaccgcgtagcctccttcttctgcgag
tgtcctcacgggcgcacaggtttgctttgccaccttgatgacgcctgcatcagcaatcca
tgccaaaagggctccaactgtgacaccaacccggtcaatggcaaagcgatctgcacctgc
ccacctggttacaccgggtcagcctgcaacctggacattgacgagtgctcccttggtgcc
aacccttgtgaacatggcggccgctgcctcaacaccaaaggctccttccagtgcaagtgt
ctgcaaggatacgaaggacctcgctgcgagatggacgtcaatgaatgcatgtccaatcct
tgccataacgatgccacctgcctggaccagattggagggttccactgcatctgtatgccg
ggatacgagggcgtgttctgccacatcaacacagacgagtgtgccagccagccttgccta
aacaatggcaagtgtgtcgacaagatcaactccttccactgcgagtgctccaaaggtttc
tcagggagtctgtgtcaggtggacattgatgagtgtgccagcaccccctgcaaaaatggc
gccaagtgcaccgatgggccaaacaaatacacctgcgaatgtgctgaaggttactcaggt
cagcactgcgagactgacatcaacgagtgctactctgacccctgccactatggcacctgt
aaggacggcctggcctccttcacctgctactgccgccctggctacaccggccgcctgtgt
gagaccaacatcaacgagtgtctgagccagccctgcaagaacggtggcacttgccaggac
agggagaacacgtatatttgtgcttgccccaaaggcacagcaggcttcaactgcgaggtg
aacctggacgactgcaagagcaaaccctgcgactacgggagatgcatcgacaaaatcaac
ggctacgagtgtgcgtgcgagcccggctacacaggagcgatgtgcaacatcaacatcgat
gagtgtgccatcaacccgtgtcacaacgggggcacgtgcgtcgacggcatcaacagcttc
acctgcctgtgcccggacggctacaacgacgccacctgtctgtctcaggtggatgagtgc
ggcagcaacccgtgcatccacggccgatgccaggaccttatcaatggctacaaatgtacc
tgcgactctggctggagcggcccaaactgtgacatcaacaacaacgagtgtgagtccaac
ccgtgcatgaacgggggaacctgcaaagacatgaccagcggataccactgcacatgcaga
gtcggcttcactggacctaactgccaaactaacatcaacgagtgcgcctccaacccctgc
ctcaaccagggcacctgcatcgacgatgtggccggatacaagtgcaactgtttgctgccc
tacactggtgaaaactgtgagaccctgcttgcaccctgcagcccaagaccctgcaaaaat
ggtggagtttgcaaggagtctgaagactaccagagcttctcctgcatctgccctgaagga
tggcaaggtcaaacatgtgagattgatatcaacgagtgtgtgaagagtccgtgccgcaat
ggtgctatttgccacaacacaatgggcggctaccagtgcaagtgccagccgggttacacc
ggccagaagtgcgagacagacacagatgactgcaaaccaaatccctgcagtaacggcggt
ctgtgccgcgatggcatcaacactttcacctgtacctgtctgcccgggtttcgtggcggc
agatgcgagcaggacattaatgagtgtgagagtaacccgtgtaggaacggcgccaactgc
accgactgtgtgaacagctacacctgcacctgtccacctggcttcagcggcatcaactgt
gagatcaacaccaacgactgcacagacagctcttgcttcaatggtggcacctgtgtagat
ggaatcaatgcgtttacctgcctgtgtctacctggattcactggcagctactgccaatat
gatatcaatgagtgcgactccaagccgtgcctcaacggaggctcttgtcttgacagttac
gggacgtacaagtgcacctgtcctcatggctacacaggagtcaactgtcagaatctggtg
cgctggtgtgattcatccccttgtaaaaacggcggctcgtgctggcagcagggagcctcg
tacacctgccagtgtcagactggatggactggtctctactgtgacatccccagtgtgtct
tgtgaggtcgcagccaaacggcaaggggtggaggtggctcacctctgcaggaactcaggt
cagtgtctggatgctggaaacacacattactgccgctgccaggctggctacaccgggagt
tactgccaggaacaagtggacgagtgctcacccaatccatgccagaatggagccgtctgt
actgattatctgggaggctacagctgtgagtgtgtccccggctaccacggcgttaactgc
tccaaagagatcaatgagtgtcagtcacagccctgtcagaacggaggcacctgcatcgac
ctcatcaacacttataagtgctcctgtcccagaggaacacaaggtgtccactgtgagatc
aatttggatgactgcaccccctccaccgacccactgaccaatgagcccaagtgcttcaac
aacggcaagtgtgtggaccgaattggaggttaccagtgcgtgtgcccggcaggctacgta
ggcgagcgctgtgaaggggatgtcaatgagtgtttgtccgacccctgcgaccccagaggg
tcctacaactgtattcagctcaccaacagctaccgctgcgaatgccgcactggatataca
ggtcagcgttgtgacaaggtgtttgatggatgcaaaggaagaccctgcaggaatggagga
acatgtgctgttgccagtaacacacctcatggtttcatctgcaaatgtccacctggcttc
accggctcttcttgcgagtacgattctcgctcctgcgggagtctgaattgcaggaacgga
ggcacatgtgtgtcaggccacctaggcccacgctgcctgtgtccaccaacctttaccggg
cccgagtgccagacccccaccgacagcctctgcatctcaaacccctgctacaacggtggc
acatgccagatcaccccggaagtgcctttcttccagtgcagctgtccgagcaatttcaac
ggcctgctgtgccacatccttgactattcctttgtcggaggattcggccgggacatcacc
ccacctccggaagttgaggtgagctgcgagattcctcagtgtgacgagtgggcggggaac
cacatctgcgactcgctgtgcaacaaccacgcttgcggctgggacggaggagactgctcg
ctaaatttcgatgatccttggcaaaactgctcggcggccttgcagtgctggcggtacttc
aacgatgggaagtgcgatggccagtgcaacagccctgggtgtctgtatgatggctttgat
tgtcagggacaggagggacaatgcaacccgctctatgaccagtactgcaaagaccactac
gccgacggtcactgtgatcaaggctgcaacaatgcagaatgcgaatgggacggcctggac
tgtgccaacaacatgccagagaagctggcagacgggcacttagttctggtggtccatatt
cccccagaacagcttaaaaacggttcctcggctttcctcagagagctgagcagcgttctg
cacaccaatgtggtgttccgtcgcgatgccaaaggagaaccgatgatcttcccttactac
ggcaatgagcaggacctggttaaacataacgtgctgaagcgctcggcagatggctggcct
gagtgggctaccatgccatccaatgttttgggtcagatgaaggaaagcgtgacggccatc
gtcagcccacggaaacgcagagagctggatcccttgcaagtcaaagggtctgtggtgtac
cttgagattgacaaccgtcagtgttaccagcagtccagtgaatgcttccagagcgccaca
gatgtagctgcattcctcggagcactggcctccagtgggaacctcaacgtcccctatatt
gaagctgtcaccagcgtgagacctactccctccggtccagagctctaccccatgtatgtt
gtcttcctcggcttggctgctcttggtttcatctgccttggtgttctggtgtcacgtaag
cgtcggcgagagcacggccagctctggtttcctgagggattcaaagtgtcggagcccagc
aagaagaaacgcagagagccgctgggagaggattctgtcggactaaagccgatgaaaaac
tctgacatcaatcttatggatgacaatcaaaatgagtgggaagacgaggatccagactgc
agccgctttaggcttgaagagcaggctatgttggatttgagtgaccatacggaccacagg
aaatggacacagcagcatctggatgcggctgatttgcgtattgcgtccattgctccaact
cctccacagggagatatcgagaacgactgcatggatgtcaatgtcagaggaccagatggt
ttcactcccctcatgatcgcctcctgcagcggcggaggattggagactggtaacagtgaa
gaggaagaggatccctctgcagagatcatctctgacttcatctaccagggcgcaaacctt
cacaaccagactgaccgcacaggcgagacagccctccacctggccgctcgctatgcccgc
tctgatgctgccaaacgcctgctggagtccagcgccgatgccaacgttcaggacaacatg
ggccgcactccgcttcacgctgctgtggctgcagatgcacagggagtgttccagatttta
atccgaaaccgcgccactgaccttgatgcccgaatgcacgacggaacgacaccgctgata
ctggcagcccgactggcggttgacggcatggtggaagagcttatcaactgccacgctaat
gctaacgccaccgacgattccggtaaatctgctcttcactgggccgcggctgtaaacaat
gtggaggctgctatggtgctgctgaaaaatggagccaacaaagatatgcaagacaacaag
gaagagacaccgctcttcctcgcagctcgtgaaggcagcttcgagacagccaaggttctt
ctggagcaccttgccaatcgtgagatcaccgaccacctcgaccagctacccagagatatc
gcccaggagcgcatgcaccatgacatcgtccgccttctggatgagtacaacgttgtcagg
agtcccgggcttcacagcggtcctctaagcacctccagcctctccccacctctctgctct
cccaatgactaccttagcaacctcaaacctgccctttctgccaagaaggttcgcaaattg
agctccggcaaaggggggaaggacggaggcaaaggtaatagaatgaagaagaataaatca
ctagatgggaagggtagcttgttggacacgtcagccgtcctctccccggttgagtcgctc
gagtctcctcatggctacctgtctgatgtggcctctcctcctatgacatcccccttccag
cagtccccacctatgtctttaaatcacctacaaggcaatggagactcccacatgggccag
atgatgggtaaggatttgggctgtatgtcttttgaccctaacccgcctcggctctcccac
ctgcctgtgtccagccccggcagtcagggaacgacatccataggtagcagaggaggccag
tgtgactgggtctccaggatgcacccaggtgtaggccagcaaggaggcttctcccaggcg
ccacaaatgtcccacaatataatgggtgctctgcatggcgtcagcactgccaccctgtct
cagatcatgggctaccagaacatgcagaccagccatatgggttcgtccgtgcacatgatg
cagcaggctcactcgcggcagctccagcaccagaactccaactctgccacagccgggcag
ggactcaaccagagctttcccaacgtggagctaagctccgacatgcagcaaaacaacgct
cgctctatgcccattcacaccgttatgccccaggagacgcagatcctcggcacccagttc
ctcacccctccctcccagcacagctactctggccccatggacaacacacccaaccaccag
ctacaggtgcccgaccacccttttctaaccccctcccccggctcccccgaccaatggtcc
agctcgtccccacattccaacatgtccgattggtcggaaggaatctccagcccgccaaca
agtatccactcgcagatgaatctgatcccagaccagtttaagtaa
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integrated database retrieval system
