Semicossyphus pulcher (California sheephead): 138602081
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Entry
138602081 CDS
T10596
Symbol
rc3h2
Name
(RefSeq) roquin-2
KO
K15690
RING finger and CCCH-type zinc finger domain-containing protein
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spul03000
]
138602081 (rc3h2)
04121 Ubiquitin system [BR:
spul04121
]
138602081 (rc3h2)
Transcription factors [BR:
spul03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
138602081 (rc3h2)
Ubiquitin system [BR:
spul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
138602081 (rc3h2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Roquin_1_2-like_ROQ
ROQ_II
zf-RING_5
zf-CCCH
zf-RING_2
zf-RING_UBOX
zf-CCCH_4
Prok-RING_4
zf_CCCH_4
zf-CCCH_UNK
zf-C3HC4_2
zf-C3HC4_4
zf-C3HC4
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
138602081
NCBI-ProteinID:
XP_069529570
LinkDB
All DBs
Position
Unknown
AA seq
1146 aa
AA seq
DB search
MPVQAAQWTEFLSCPICYNEFDSSGHQPISLGCSHTVCKTCLHKLHRKACPFDQTPISTD
IDLLPVNCALLQLVGAQVPDVQPVSLSSAAEVENYEACRVCVEELALYLKPISGAKGVAT
LSPSVLSRPMQRKLVTLVNCQLVEEEGRVRAVRAGRSLGERTVTELILQHQNPQQLSANL
WAAVRARGCQFLGPAMQEDALKLVLLALEDGSALSRKVLVLFVVQKLEARFPQASKTSIG
HVVQLLYRASCFKVTKRDEDSSLMQLKEEFRTYEALRREHDAQIVHIAMEAGLRISPEQW
SSLLYGDLVHKSHMQSIIDKLQSPESFAKSVQELTIVLQRTGDPANLTSLRPHLELLANI
DHNPDAPAPSWEELESVMLAVKLVVHGLVEFIQNFSKKSHDTPQPQANSKYKTSMCRDLR
QQGGCPRGTNCTFAHTQDELEKFRLRNKKSSSVGRSFPLAPGVMGKTFTMEGSIHTDVSA
GVGPGLKGTGENTAALTEAAPGLTHPQLVSRGPDMMEDIKRAVPNGSSGSNGLSGTNRNT
SGSNEQKPLSPPRTPVSHSSASSPLASVGRGDGGAPMPKHGPFLLRGPHPSQASELYYQD
PHSAYETGHYQPTSCSYYPSTLHPPHKPCMARFLRSSNVPESSLPPSIGPPPSSYPSDAQ
TQHPPVSSSSGYPPHPPRDRMVPPTFHPHPGQPPYGPLAPAHGVYAPLYDSRRVWRPQLY
HREDARSNSLPPEVLHSSVYQPPLRERFNSLDSNYCSGAEHRAGLHRDYGRVPLGYEDLF
RRKQEQWAHHHHHHNANRPSQSSPIFTIDFGTEHVQSGGGQCVGCRFRGEESLAHYSPWS
CGTIGPCLSPFEPEALTHTSAHSCSEHSELDSSGGGGGGVSVGGVGKRWLHSLDHYRRLK
DEDPIIPFSEGPIISKWGAISRAARTGYHTTDPVQATACQGSASTTPINFKDYNPHLDHS
NYRWSSRGSDSSSHSSFLESELHGRRTSISSGERSMSDLQAHQTAYNPDRDRAESESDPG
RDIELELCALDMEDSDTQEIKSQESLDLATQQSQDASNLLSPSCSSPLLSSPVEEHPQSD
CPSTDKMDPHLLKKLAFRKSLSPGGLVPGGLGVDKLLLRTGPPRLGDTSTRACPETPVTE
MLLNGS
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgccggtgcaggccgcccagtggacagagttcctgtcctgccccatctgctacaatgag
ttcgacagcagcggccaccagcccatcagcctgggctgctcccacacggtgtgcaagacc
tgcctgcacaagctgcaccgcaaggcctgccccttcgatcagacgccaatcagcaccgat
atcgacctgctgccggtcaactgcgccctgctgcagctggtcggagctcaggtcccggac
gtgcagccggtgagcctgagcagtgcagccgaagttgagaactatgaggcgtgcagggtg
tgcgtagaagagctggctctctacctgaaaccgatcagcggagcaaaaggtgtggcgact
ctgagtccgagcgtgctcagtcggccgatgcagaggaagctggtgactctggtgaactgt
cagctggtggaggaggagggccgcgtgcgggcggtgcgggcgggccggtcgctgggcgaa
agaaccgtaactgagctcatcctgcagcaccagaacccccagcagctctctgccaacctc
tgggctgcggtgagggcgcggggctgccagtttctaggacctgctatgcaagaagacgca
ctgaagctggttcttctcgctctggaggacggctcagctctgtccaggaaggtgttggtt
ttgttcgtcgtccagaagctggaagctcggttcccccaggcctctaagaccagcataggc
cacgtggtgcagctgctctacagggcctcctgcttcaaggtcaccaaacgtgatgaagac
tcctctctgatgcagctaaaggaagagtttaggacgtacgaggctctgaggagagaacac
gacgctcagatcgtccacatcgccatggaggcgggcctacgcatctcccctgagcagtgg
tcttctctgctgtatggagacctggtccacaagtcacatatgcagtccattattgacaag
ttgcagtcaccagagtcgtttgcaaagagcgttcaggagctgacaatcgttctgcagcgg
acaggagaccctgcaaacctcaccagccttagaccacacctcgagctactggccaacata
gaccacaacccagatgccccggcaccgtcatgggaggagctggaaagtgtgatgctggct
gtgaagctggtggttcacggactggtggaattcatacagaacttcagcaagaagagccac
gacactccacagcctcaggccaacagcaagtacaagaccagcatgtgccgagacctccgt
cagcagggaggctgtcccagaggaaccaactgtacatttgcacacacacaggacgagctg
gagaaattcagactaagaaacaagaaaagcagcagcgtgggccgttcgttccctctagca
ccgggggttatgggtaaaaccttcaccatggagggcagcatccacacggatgtctctgcg
ggagtggggccggggctcaagggcacaggggagaacacagccgccctgacagaggcagca
cccggcctgactcacccgcagctggtgtccagagggcctgacatgatggaggacattaag
agggcggtgccgaatggatccagtgggtccaacgggttatcaggcactaacaggaacaca
tcagggtcaaatgaacagaagcccctgtctcctcccagaactccagtcagccactcctca
gcgtcgtctcctttggcatcagttgggcgaggtgatggtggcgctcctatgcccaaacat
ggtcctttcctgctgcgtggacctcatccttctcaggcgtcagagctttactatcaagat
ccccactctgcatatgaaacaggccattatcaaccaacctcatgttcctactacccatct
actctccaccctcctcacaaaccctgcatggcacgctttcttcgatcctccaacgtccca
gaatcctccctgcctccctcgattggccctcctccgtcctcctaccccagcgacgctcag
acacagcacccacctgtctcatcctcttcagggtatccaccacacccacccagagatcgt
atggtacctcccaccttccatcctcacccggggcagcctccgtacgggcctctggctcct
gctcacggtgtttatgctcctctctatgacagcaggagagtatggaggcctcagctgtac
cacagagaggacgccaggagtaactctctgcctccagaagtgctgcactcctctgtgtac
cagcctccactcagggagagattcaactctctagacagcaactactgctctggagctgaa
caccgcgcggggctacacagggattatggccgtgttcctctgggctacgaggatctgttc
aggaggaagcaggaacaatgggctcatcatcaccaccatcacaacgccaacaggccctcc
cagtcctcccccatcttcaccatcgattttggaactgagcacgtgcagagcggtggaggc
cagtgcgtgggctgcagattcaggggcgaggaaagtttagcccactactctccgtggtcc
tgtggtaccatcggcccctgcctcagcccctttgagcccgaagcgctcacacacacctcg
gctcactcctgctcagagcactcggaattagacagtagcggaggtggaggcggtggcgtt
agcgtgggtggtgtcgggaagcgatggctgcattctttggatcactaccgccgcttgaaa
gacgaggaccccattattccctttagcgagggacccattatctccaagtggggcgccata
tccagagcagctcgcaccggctaccacaccaccgaccctgtccaagccacggcctgccag
ggcagcgccagcaccacgcccatcaactttaaagattacaacccgcacttggatcacagc
aactacagatggagctccagaggctcagactcttccagccactctagtttcctagagagt
gagcttcacggccgtcggacatccataagcagtggagagagaagcatgtctgatctgcaa
gcccatcagaccgcctataacccggatcgagaccgggctgagagcgaatccgacccgggt
cgagacattgagctggaactgtgcgcgcttgacatggaggattcagacacccaggagatc
aagtctcaggagtctttagacctggctacgcaacagtctcaggatgcttccaacctcctc
tcaccttcctgctcctctcccctcctttcttctcctgtggaggagcacccccagtcagat
tgtccctcgacagacaagatggacccccacctgctgaaaaagctggccttcaggaagtct
ctgtcacctggagggttggtcccaggaggtctgggtgtcgacaagctgctgctgcggact
ggacctccacgacttggggacacttccactcgggcttgtcctgaaacccctgtgacagag
atgctgctcaatggaagctaa
DBGET
integrated database retrieval system
