Semicossyphus pulcher (California sheephead): 138603368
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Entry
138603368 CDS
T10596
Symbol
scn1lab
Name
(RefSeq) sodium channel, voltage-gated, type I like, alpha b isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
spul04040
]
138603368 (scn1lab)
Ion channels [BR:
spul04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
138603368 (scn1lab)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
IQ_SCN5A_C
GPHH
PKD_channel
Spem1
IQ
Motif
Other DBs
NCBI-GeneID:
138603368
NCBI-ProteinID:
XP_069531204
LinkDB
All DBs
Position
Unknown
AA seq
2033 aa
AA seq
DB search
MAQLLVPPGPDSFRPFVPESLAAIERRIAEEEARRPRAERRSDSDDENGPKPNSDLEAGK
SLPFIYGDIPPRLVSTPLEDMDTFYSNQKTFIVLNRGKAIFRFNATPALYILNPFNPLRR
VAIRVLVHSMFSMLIMFTILTNCAFMTLSNPPEWAKNVEYTFTGIYTFESLIKILARGFC
VGKFTFLRDPWNWLDFSVILMAYVTEFVDLGNVSALRTFRVLRALKTISVIPGLKTIVGA
LIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRQKCVRVPIINNATNSSNITADDWAF
YNNSMMDINTTFVQNSTENPLNWTEYISDESNYYYLPGRRDALLCGNGSGAGHCPEGFIC
IKAGRNPDYGYTSFDTFSWAFLSLFRLMTQDYWENLYQQTLRAAGKPYMVFFVLVIFLGS
FYLVNLILAVVAMAYDEQNQATIEEAQQKEEEFQAMLEQLKRQQEEAQARHFRIQVAAAA
ATESGEYSGRGGPTSESSSGTSKLSSKSAKERRNRRKKRKQREEEEERGARDKFHKSESE
DSIKRSSFRFSIDANRLSYEKRCSSPNQSLLSIRGSLFSPRRNSRASLFSFRGRARDMGS
ENDFADDEHSTFEESDSRRGSLFLPRRLERRCSAVSQTSLGAPRIVLPANGKMHCAVDCN
GVVSLVGGTSVTTSPVGLLLPEGTTTDTELKKRRPGFHQPSMDYLDEPGSRPRAMSVASI
LTNTMEELEESRQKCPPCWYRFANTCLIWDCCPQWLKIKDVVCKVVMDPFVDLAITICIV
LNTLFMAMEHYPMTKEFDNVLSVGNLVFTGIFTAEMCFKIIALDPYYYFQEGWNIFDGII
VSLSLMELGLANVEGLSVLRSFRLLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAI
IVFIFAVVGMQLFGKSYKECVCKISDECTLPRWHMHDFFHSFLIVFRVLCGEWIETMWDC
MEVAGQSMCLIVFMMVMVIGNLVVLNLFLALLLSSFSADNLAATDDDSEMNNLQIAVGRI
QRGIAFVKSMVRQGLRSLCFGGSGKGSALAEESKPLDELHSNGKGNCISNHTSVEITKDP
SGVYVTEGNGRPGGGLVVGVGVGGDTPGNYPMEECDYMSFIHNPSLTVTVPIAVGESDFE
NLNTEDFSSDSSDVEGSKEKLDVEPQRLSSSEGSTVDIRPPGDGVDSVELEPEESLDPEA
CFTEGCVSRFQCCQINEEGLHYKNWWTLRKTCFIIVEHNWFESFIIFMILLSSGALAFED
IYIEQRRTVKTVLEYADKVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFLIVDVSLVSL
VANALGYSELTAIKSLRTLRALRPLRALSRFEGMRVVVNALLGAIPSIMNVLLVCLIFWL
IFSIMGVNLFAGKYYYCVNTTTDVIFPIEVVNNKSECLNLVNDSARWKNVKINFDNVGAG
YLALLQVATFKGWMDIMYAAVDSRNLEDQPNYEVNLYMYLYFVIFIIFGSFFTLNLFIGV
IIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPANAFQGCVFDCITKQ
AFDIVIMILICLNMVTMMVETDDQTPDMDKILYWINLVFIVLFTGECVLKMISLRHYYFT
IGWNIFDFVVVILSIVGMFLSEVIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLF
ALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKREAGIDDMFNFETFGNSMICLFQIT
TSAGWDGLLAPILNKREPDCDSQMEHPGNFYKGNCGNPSVGIFFFVSYIIICFLIVVNMY
IAVILENFSVATEESAEPLSEDDFEMFYEVWERFDPDATQFMEYSKLSDFADALDPPLRM
PKPNMIQLISMDLPMVSGERIHCLDILFAFTKRVLGEGGEMDVLRGQMEERFMASNPSKV
SYEPITTTLRRKQEDMSAVIIQRAFRRYMIRLAMKKASALYKEQLKKGIRDPDKDVMVIC
KFTENSTSDKTDMTPSTASPPSYNSVTKSDKDKYEKENREKENKAKDLKDRKK
NT seq
6102 nt
NT seq
+upstream
nt +downstream
nt
atggcacagctgcttgtaccgcccggacctgacagcttccgccccttcgtccccgagtcg
ctggccgccatcgagaggcgcatcgccgaggaggaggcccggagaccacgggcggagcgc
cgcagcgacagcgatgatgaaaatgggcccaagcccaacagcgacctggaggcggggaaa
tctctccccttcatctacggggacatccctccccgcctggtgtccacccctctggaggac
atggacaccttctacagcaatcagaagaccttcatagtattgaatcgcgggaaggcaatc
ttccgtttcaacgccactcctgccttgtacatcttaaaccccttcaaccctctgaggagg
gtagccattagagttttggtacactcgatgttcagcatgttgatcatgttcaccatcctg
accaactgtgctttcatgaccctcagtaatcccccggaatgggccaagaatgtagagtac
acattcacagggatttacaccttcgagtcccttataaagatcctggccaggggcttctgc
gtggggaagttcactttcctgcgcgacccgtggaactggctggatttcagtgttatcctc
atggcatatgtcacagagtttgtggacctgggcaatgtctcagcactgcgaaccttcagg
gttctgcgagccctgaaaactatatcagtcatcccaggcttgaagaccatcgtcggcgct
ctgatccagtcagttaaaaagctatcggacgtcatgatcctcaccgtgttctgcctcagc
gtcttcgccctcatcggcctgcagctcttcatgggcaacctgaggcagaagtgcgtgcgc
gtgccgatcatcaacaacgccaccaacagcagcaacatcaccgccgatgactgggcgttt
tacaacaacagcatgatggatatcaacaccacgtttgtgcagaactcgacggagaacccc
ttaaactggacggagtacatcagcgatgagagtaattactattacctccccggccgcagg
gatgctctgctctgcgggaacggcagcggcgccgggcactgtccggagggcttcatatgt
attaaagccggccgtaacccagactacggctacaccagcttcgacaccttcagctgggcc
ttcctgtccctgttccgactcatgacgcaggactactgggaaaacctctatcagcagacc
ttacgcgcggcgggaaaaccctacatggtcttcttcgtcctcgtcatcttcctgggctcc
ttctacctggtcaacctgatcctggccgtggtggccatggcgtacgacgagcagaaccag
gcgaccatcgaggaggcccagcagaaggaggaggagttccaagccatgctggagcagctg
aagaggcagcaggaggaggcacaggcaaggcatttcagaattcaagttgccgcggcagca
gccaccgagagcggagagtacagcgggagagggggccccacctcggagtcctcctcgggg
acgtcgaagctcagctccaagagcgccaaggagcggcgcaacaggcggaagaagaggaag
cagagggaggaggaggaggagaggggggcgcgggacaagttccacaagtctgagtccgag
gacagcatcaagaggtcgagcttccgcttctctattgacgccaacaggctgtcttatgag
aaaagatgctcctctccaaaccagtctctcctcagcatccgtggctccctcttctcacct
cgcaggaacagccgcgccagcctgttcagcttccggggccgcgcgcgcgacatgggctcc
gagaacgacttcgccgacgacgagcacagcaccttcgaggagagcgacagccgccgcggc
tccctgttcctgcctcgacggctcgagcgccgctgcagcgccgtcagccagacgagcctc
ggggcgccgcgcatcgtgctgcccgccaacggcaagatgcactgcgccgtggactgcaac
ggcgtggtgtcgctggtcggcggaacgtctgtaacaacctcccctgtaggtctcctgctg
cctgagggaacaactacagacactgagcttaagaaaagacggccaggttttcaccagcca
tctatggattatttagacgaaccaggaagcaggccgagagccatgagtgtggccagtatc
ctcaccaacaccatggaagagcttgaagagtcgagacagaagtgccctccttgctggtat
cgattcgccaacacctgcttgatctgggattgttgcccccaatggctgaaaatcaaggac
gtcgtctgcaaggtggtcatggacccatttgtggaccttgccatcacaatctgcatcgtc
ctcaacaccctcttcatggccatggagcattacccgatgacgaaagaattcgataacgtc
ctctcagttggaaacctggtgttcacaggcatcttcacagcagagatgtgcttcaaaatc
atcgccctggatccatactactacttccaggagggctggaacatctttgacggcatcatc
gttagcctgagtctgatggagctcggcttggccaacgttgaaggcctgtctgtgctcagg
tccttcagattgctgagggtcttcaagctagccaagtcctggcccactctgaacatgcta
atcaagatcatcggtaactcagtgggtgctctggggaacttgactctggtgctggccatc
atcgtcttcatcttcgccgtggtgggcatgcagctgtttggcaagagctacaaggagtgt
gtgtgcaagatttctgacgagtgcacgctgccacgctggcacatgcacgacttcttccac
tccttcctcatcgtgttccgggtgctgtgcggagagtggatcgagaccatgtgggactgc
atggaggtggctgggcagagcatgtgcctgatcgtcttcatgatggtcatggtcattgga
aacctggtggttctgaacctgttcctggctcttcttctgagctcattcagcgccgacaac
ctcgcagcaaccgacgacgacagcgagatgaacaacctgcagattgctgttggccggatc
cagcgagggatcgcctttgtcaaatccatggtgcgacagggcctccggagcctctgcttc
ggcggatcgggtaagggctccgctctggctgaggagagcaaacctctggatgaactacac
agcaacggcaagggcaactgcatctccaaccacacttcagtggagatcaccaaagacccc
agtggggtgtacgtgacggagggcaatggacgaccgggaggagggctggtggttggggtc
ggggttggtggggacactccagggaattacccaatggaggaatgcgactacatgtcgttt
attcataacccaagcctgactgtcacagtgcccatcgctgtgggtgagtcggactttgag
aacttgaacacagaagatttcagcagcgactcgtcggacgtcgagggcagcaaagagaag
ctcgacgtagagccccagcgtcttagctcatcggaggggagcacggttgatattcgcccc
ccaggagacggggtggattcggtggagctcgagccagaggagtcgctggacccagaggcc
tgcttcacagagggctgtgtgagcaggttccagtgctgccagatcaacgaagaggggctg
cattataagaattggtggacactcaggaaaacctgctttatcatagtggagcacaactgg
tttgagtccttcatcatattcatgatcctgctaagcagtggagcactggcgtttgaggac
atttacatcgagcagcggaggacagtcaaaacagtgctggagtacgcagacaaggtcttt
acctacatattcatcctggaaatgctgttgaagtgggtggcgtacggcttcgtcaagtac
ttcaccaacgcctggtgctggctcgacttcctcattgtagacgtgtccctggtcagcctt
gtagccaatgctctgggctactcggagcttaccgccatcaaatctctgaggacactgcga
gccctccgacccctgagggccctgtctcggtttgagggtatgagggttgtggtgaacgcg
ctgctcggggccatcccgtccatcatgaacgttctgttggtgtgcctcatcttctggctc
atcttcagcatcatgggcgtcaacctgttcgcagggaagtactattactgcgtcaacacc
accacagatgtgatcttccccattgaagttgtcaacaacaagtcggagtgcctgaacttg
gttaacgacagcgcccgctggaagaacgtcaaaatcaactttgacaacgtcggggccgga
tacctggctctgttgcaagtggcaacatttaagggttggatggacatcatgtacgcagct
gtggactctcgaaatttggaagaccagccgaactacgaagtgaacttgtacatgtacctc
tactttgtcatcttcatcatcttcggctccttctttaccctcaacctgttcatcggcgtc
atcatcgacaacttcaaccagcagaagaagaagtttggaggtcaggacatcttcatgaca
gaagaacaaaagaaatactacaatgccatgaagaagctgggttcaaagaaaccccaaaaa
cctatacctcggccagcaaatgcatttcaaggctgcgtgttcgactgcatcacaaagcag
gccttcgacattgtgatcatgatcctcatctgccttaacatggtgaccatgatggtggag
acagacgaccagacgccggacatggacaagatcctttactggatcaacctggtcttcatc
gtgctcttcactggggaatgtgtgcttaagatgatctctctgcgacactattactttacc
attggttggaatatatttgactttgtggtggtgatcttgtccatcgtaggtatgttttta
tctgaagttatcgagaagtactttgtgtccccgaccctgtttcgagtgatccgtctggcc
aggatcggcagaatcctccgccttatcaaaggtgccaaaggcatccggacgcttctgttc
gccttgatgatgtccctccctgccctcttcaacattggcctcctcctcttcctggtcatg
ttcatctacgccatcttcggcatgtcgaactttgcctacgtgaagcgtgaggccggaatt
gacgacatgttcaatttcgagacattcgggaacagtatgatctgtttgttccagatcacc
acctcagccggttgggacggcctgttggcgcccattttgaacaaaagagaacctgactgt
gacagccaaatggagcacccggggaacttctacaaaggcaactgcggaaacccgtctgtg
ggcatcttcttcttcgttagctacatcatcatctgctttctcattgtggtcaacatgtac
atcgccgttatcttggagaacttcagcgtggccactgaggagagcgccgagccattgagc
gaggacgattttgaaatgttctacgaagtgtgggagcgcttcgatccggacgccactcaa
ttcatggagtacagcaagctctcggactttgcagatgctctagatccaccgcttcgaatg
cccaagccgaatatgatccaactcatctcaatggacctgccaatggtaagtggcgagcgc
atccactgcctcgacatcctgtttgccttcacgaaaagagtcttgggcgaaggtggcgag
atggacgtgctacgcgggcaaatggaagagcgcttcatggcttctaacccctctaaggtg
tcttacgaaccaataaccaccaccctccgccgcaaacaggaggacatgtcagccgtaatc
atccaacgagccttccgccgctacatgatccgcctggccatgaagaaagcctccgccctc
tacaaggagcagctgaaaaagggcatccgtgaccccgacaaggacgtgatggtcatttgc
aagttcacagagaactcaacctcggacaaaacggacatgaccccctcgacggcctctcca
ccctcgtacaacagcgtgacgaaatcggacaaggacaaatatgaaaaagaaaacagggaa
aaagaaaataaagcgaaagacttaaaagaccgaaagaaatag
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integrated database retrieval system
