Semicossyphus pulcher (California sheephead): 138603392
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Entry
138603392 CDS
T10596
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
138603392
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
spul04121
]
138603392
Enzymes [BR:
spul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138603392
Ubiquitin system [BR:
spul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
138603392
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COS
SPRY
ANCHR-like_BBOX
zf-B_box
fn3
zf-RING_UBOX
RING_XB3-XBAT31
zf-C3HC4_4
zf-C3HC4
PRY
Ig_DSCAM-DSCAML_C
zf-C3HC4_3
zf-RING_2
Pur_ac_phosph_N
zf-C3HC4_2
zf-RING_5
NDNF
Motif
Other DBs
NCBI-GeneID:
138603392
NCBI-ProteinID:
XP_069531243
LinkDB
All DBs
Position
Unknown
AA seq
687 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFGCAHRILISHCATNESVQSIGAFQCPTCR
YVISLSPERGLEGLKRNVTLQNIIDRVQRASSSAGLPLPLPAPHSGPNSPSEEGSNRLAL
VPVSAAMSSPGTPPEPVQCQFCEQDPPQDAVKTCVTCEVSYCEECLRATHPNKKPFTGHR
LIEPMPDSHLRGLQCLEHEEEKVNMYCVTDDQLICSLCKLVGRHRDHQVAALSDRYEKLK
QALDSNLSNLIKRNNELESLMGKLIQTCQHVEVNASRQEGKLMEECDLLIDIIQQRRQII
GSKIKEGKAQRLRKLAQQITNCKQCIERSSALITQADQTLKETDHARFLQTAKSINERVS
MATASTQVLIPEIHLTDTFDTFALDFAREKKLLENLDYLTAPSAPCIREELCTASYDTIA
VHWTSDDEFTVVSYELQYAIFTGQSNIASLCNSLESWMIVPNIKQNHYTVHGLQSGTKYI
FVVKAINQAGSRSSEPGTLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETTSKKGHSQE
RFTSQSSYGVVGNVYIDSGRHYWEALIGGSTWYAVGIAYKSAPKHEWIGKNSASWVLCRC
NNSWVVRHNSKELAIEPSPHLRRVGVLLDYDAGYLTFYDAVGSQHLHTFHVSFVQPVCPV
FNVWNKCLTILTGLPIPDHLEGLDPQD
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atggaaactctggagtcagagctgacctgcccaatctgcctggagctctttgaagacccg
ctgctgctcccctgcgcccacagcctgtgcttcggctgcgcccaccgcatcctcatctcc
cactgcgctaccaacgagtctgttcagagtatcggcgccttccagtgccccacctgtaga
tatgttatttccttgagtcctgaacgtggattagaaggacttaagagaaacgtgacattg
cagaacattattgatagagtccagagggcctcatcttcagcggggctacctctaccgctg
cctgcgccccacagcgggcccaactctcccagcgaggaagggagcaatcgattggcgctg
gtcccagtcagcgccgccatgtccagcccggggacgcctcccgagccggtccagtgccag
ttctgcgagcaggacccgccacaggacgccgtgaaaacgtgcgtgacgtgcgaggtgtcg
tactgcgaagagtgcctcagggcgactcaccccaataagaagcccttcaccggacacagg
ctcattgagcccatgccggactcccacctcagggggctccagtgcctggagcatgaggag
gagaaggtgaacatgtactgtgtcactgacgatcagctcatctgctcgctgtgcaaactg
gttggacggcacagggaccaccaggtggcagcgctgagcgaccgctacgaaaagctcaag
caagccctggactccaacctgagcaatttgattaagaggaacaacgagctggagtcgctc
atggggaaactgatccagacttgtcaacatgtagaggtgaacgcttcccgtcaggagggc
aagctcatggaggagtgtgatctcctgattgacattattcagcagaggaggcagatcatt
ggcagcaagatcaaggaggggaaggcacaaaggctgcggaagctcgcccagcagatcacc
aactgcaagcagtgcatagagaggtcgtcggcgcttatcacacaggccgaccagacactg
aaagaaacggatcatgctcgcttcctgcagactgccaagagcatcaacgagagggtgtca
atggcaactgcatcgacccaagtactgatccctgagatacacctaacggacaccttcgac
actttcgccctggactttgccagagagaagaagttgctagagaatctggattatcttacc
gctccaagcgctccgtgcataagggaagagttgtgcacggcttcctacgacaccatcgcc
gtgcactggacgtctgatgatgagttcacagtggtgtcctatgagctccagtacgccatc
ttcactggacagtccaacattgctagtctgtgtaactcattggagagctggatgattgtt
cccaacatcaagcagaaccactacacagtgcacggtctgcagagtggcaccaagtatatc
tttgttgtcaaggccattaaccaagcgggaagcaggagcagtgaaccagggactctgaag
accaacagccagccgttcaagctggaccccaaatcggcccacaagaagctgaaggtgtcc
catgataacctgacagtggagcgggacgaaaccacgtccaagaaaggccacagccaggag
cgtttcaccagccagagcagctacggggtggtgggaaacgtctacatcgacagtggtcgt
cactactgggaggctctgattggagggagcacatggtacgccgtgggcatagcctacaaa
tctgcccccaagcacgagtggatcggcaagaactcggcctcctgggtgctttgccgctgc
aacaactcctgggtggtccgccacaacagcaaagagctggccatcgagccttcgccccac
ctgcggcgggtcggcgtcctgttagactacgacgcgggctacctgaccttctacgacgcc
gtgggctcccagcacctgcacacatttcatgtgtccttcgtccagcccgtgtgtcctgtg
ttcaacgtgtggaacaagtgtctgaccattctcactggtctacccatccctgaccatcta
gagggactggatccccaagactga
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