Semicossyphus pulcher (California sheephead): 138603425
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Entry
138603425 CDS
T10596
Name
(RefSeq) ATP-dependent RNA helicase DDX3X-like isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04622
RIG-I-like receptor signaling pathway
Brite
Enzymes [BR:
spul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
138603425
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
138603425
mRNA cycle factors
Common to processing body (P body) and stress granule
138603425
Spliceosome [BR:
spul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
138603425
Chromosome and associated proteins [BR:
spul03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
138603425
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138603425
NCBI-ProteinID:
XP_069531295
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MSHVAVENVHGLEQQLAVLDLSAADGQGGGANRNAFAAGRQGGYTIAPTPNYGWDGGRNN
FVNGYHDNRMAGGNAFNRGPPRMERGRGGIGGGYRGNRGGAFNPINPAQPMGFTGYENKD
AGGWNTAKDAYSSFGNNRGKSAFFNDRGNANRGRFDHGGFGGGGGGGNSRWVEEARDDGD
WSKPTPRNERLEHELFSGSNTGINFEKYDDIPVEATGQNCPHHIESFQDVDMGEIVMGNI
ALSRYTRPTPVQKYAIPIVKSKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALNAAK
ASGQENGKFGRRKQYPISLVLAPTRELALQIYDESRKFSYRSRVRPCVVYGGADIGQQIR
DLERGCHLLVATPGRLVDMMERGKIGLDYCNYLVLDEADRMLDMGFEPQIRRIVEQDTMP
HKGIRQTMMFSATFPKEIQILARDFLEEYIFLAVGRVGSTSENITQKVVWVEESDKRSFL
LDLLSATVIPSEVQDSSGDSIEKPGKDSLTLVFVETKKGADALEDFLYREGYACTSIHGD
RSQRDREEALSQFRSGKCPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGR
VGNLGLATSFFNDKNGNITKDLLDILVEAKQEVPSWLESLAYEHQHKSNNRGRSKRFSGG
FGARDYRQTAAGGNAGGFGGRGGRNQAGHGGNRGFGGGGFSNFYTSDGYGGNYTHSQVDW
WGN
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggccgtcgagaatgttcacggtctagagcagcagctcgctgtcctggac
ttgagcgcagccgacggacaaggtggaggagcaaaccgaaacgccttcgctgctggtcga
cagggcggctacaccatcgcgcccacacccaactacggctgggacggcgggcgaaacaac
ttcgtcaacggctaccatgacaaccgcatggcgggcggcaacgcgtttaaccgcggtccg
ccccgcatggaacgaggacgaggaggcatcggaggagggtaccgcggcaacaggggcgga
gccttcaaccccatcaacccagcacagccaatgggcttcaccggatacgagaataaagac
gcaggcggctggaacacggccaaggacgcttacagcagcttcgggaacaaccgagggaag
tctgccttcttcaacgacagaggaaacgccaacagagggaggttcgatcacggtgggttc
gggggaggtggaggaggaggaaacagccgctgggtggaggaggccagagatgatggagac
tggtccaaaccgacgcctcgaaacgaacgcctcgaacacgagctgttctctggcagtaac
acaggcatcaactttgagaagtacgacgacattcctgtggaggccacgggacagaactgt
cctcaccacatcgagagtttccaggacgtggacatgggggagatcgtcatggggaacatt
gctctgagccgttacaccagacccactcctgtgcagaaatacgccattcctatcgtcaag
tccaagagagacctgatggcctgcgctcagacaggttctggaaagacggcagcgttcctg
ctgcccatcctcagtcagatctacagcgacggaccaggagaagctctgaacgcagccaaa
gcctccggacaggaaaacgggaagtttgggcgtcgtaagcagtaccccatctcactggtg
cttgctcccaccagagagctggccctgcagatctacgacgagtccaggaagttctcgtac
cgttccagagtgcgtccctgcgttgtgtacggaggagccgacatcgggcagcagatcaga
gacctggagcgaggctgccacctgctggtcgccacgccgggacgcctggtggacatgatg
gagaggggcaagatcggactggactactgcaactacctggtcctggacgaggcagatcgc
atgttggacatggggttcgaaccacagatcagacgcatcgtggaacaggacaccatgccg
cacaaaggcatcagacagaccatgatgttcagtgctaccttccccaaagagatccagatc
ctggccagggacttcctggaggagtacatcttcctggcggttggcagagtgggctccacc
tccgagaacatcacccagaaggtggtgtgggtggaggagagcgacaagaggtcctttctg
ctcgacctgctcagtgctacagtcatccccagcgaggttcaggacagttctggagacagc
atagagaagcctggtaaggactcgctgacgctggtgtttgtggagaccaagaaaggcgcc
gacgctctggaagacttcctgtaccgagagggctacgcctgcaccagcatccacggagac
cgctcccagagggaccgcgaggaggcgctgagccagttcagatccgggaaatgccccatc
ctggtggccacagcggtggcagctcgaggtctggacatttccaacgtgaagcacgtcatt
aactttgacctgcccagcgacatagaggagtacgtccaccgtatcggacgtacgggccgt
gttggaaacctcggcctcgccacgtcattcttcaacgataaaaacgggaacatcaccaag
gacctgctggacatcctggtcgaggccaaacaggaagtcccctcgtggctggagagtctg
gcttacgagcaccagcacaagagcaacaacagggggcgctccaagaggttctcaggaggg
ttcggagctcgtgattaccgtcagacggccgcaggaggaaacgccggagggttcggagga
cgtggaggtcgaaaccaggcaggacacggaggaaaccgcggcttcggaggaggcggcttc
agtaacttctacaccagcgacggctacggaggaaactacacacactctcaagtggactgg
tggggcaactag
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