Semicossyphus pulcher (California sheephead): 138603604
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Entry
138603604 CDS
T10596
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spul03019
]
138603604
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
138603604
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
zf-CCCH_4
UBA_N4BP1_C
UBA_N4BP1
zf-CCCH_2
Motif
Other DBs
NCBI-GeneID:
138603604
NCBI-ProteinID:
XP_069531573
LinkDB
All DBs
Position
Unknown
AA seq
964 aa
AA seq
DB search
MGQKDHVEAGAGHILDLALDLEYLHVAGADRQAGGADGPPAMEEQGETSGNSSTANSPPP
PGSVEENAGSDVESESAPPSLDPDGGEGGLTHSKNTHQPLCRTQCVDLGTEGPPEPPSEP
SSEPEPDTPAQSSPPEPPTAAEPAAEPAPEPAPEPAPEPAPEPAPEAGGKEYQAKLEFAL
KLGYSEETVRLVLSKLGPDTLINDILGELVKLGTKSDSEQPTASLASTSSSSSTSSSSCG
CSDLLDSQRSDSPCPPDSLGDQDNLRPIVVDGSNVAMSHGNKEVFSCQGIQLAVDWFLER
GHHDITVFVPAWRKEQSRPDAPITDQEILRRLEKEKILVFTPSRRVQGRRVVCYDDRFIV
KLAYESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYSFVNDKFMPPDDPLGRHGPSLDN
FLRKRPVMPEQKKQPCPYGKKCTYGHKCKYYHPERGAQPQRAVADELRASAKTCVTTKHQ
TDTGLVKSHSVPAGSLDAKKGAPKRQSDPSIRALSYSDAEEKLLAKGRLESQKSSFCSSS
GSSCSGSLTMSPAPGGGPPSGLSLPQDQQSRAPTPHALPAPAHDLYPHCESPDMSYYSVT
RAYSGLSLSSRRSPDCRFPNDTDLRLGSMGSAGSECGSESSVSCGSCDSYSERQCPGCPP
DTLLEDNVHFANPHSRLYPHHSASNHELCGLHPAEYTNIQHSHTSNPAVHSYHMSLARQS
CAHDQPPPEAPPKRPLYPLPPHLQHQPLAARSSCPGDYHSLPQSNPHPPGSPLGRCLAPT
RAESVSDSHLYEHLSTSHHHHRNKALPGWDSYYRQPPLPPSRYEQSAYQSLPDTRQSTWH
APPWAQDGYAPHHSSHPALHPSPTHYLNHPPPSAHSAHPPHPSSTPLPPYSAHLSVPSHA
PPSYMHTESASHSRYGDMREKVYVNLCNIFPSELVSRVMARSPHITDPQQLAAAILAEKA
QTGY
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgggccagaaggaccatgtggaggcaggagcaggccacatcctcgacctggcgctggac
ttggagtatctccacgtagcgggggccgaccggcaggctggcggcgctgacgggccccct
gctatggaggagcagggggagacctccggcaacagcagcaccgctaattcccctcctccg
ccgggttcggtggaggaaaacgccgggtcggatgtcgagtctgagtcggcgccaccttcc
ctcgacccggatggaggagagggagggttaactcacagtaagaacacccaccagccgctc
tgtcggactcagtgtgtggacttaggcactgagggtcctcctgagcccccgtctgaaccc
tcatcagagcctgaacctgacacacctgcccagtcatctccacctgagcctcccaccgca
gccgagccagcagccgagccagcacccgagccagcacccgagccagcacccgagccagca
cccgagccagcacccgaggcaggcgggaaggagtaccaggcgaagctggagttcgccctg
aagctgggctactccgaggagactgtgcgactggttctgtcgaagctcgggccagacacc
ctcatcaatgacatactgggagagctggtcaaactgggcaccaagtcagacagcgagcag
ccgactgcatcgttagcctccacgtcgtcttcttcatccacctcctcctcctcttgtgga
tgttctgatctgctggatagtcagaggtcggactcgccgtgtccgccagactctctgggt
gaccaggacaacctgcggcccatcgtggtggacggcagtaatgtggccatgagccatggc
aacaaggaagtgttttcctgccagggcatccagctcgcagtcgattggttcctggagcga
ggtcatcatgacatcacagtatttgtgcctgcgtggaggaaagagcagtcccgccctgat
gcccctataacagatcaggagatcctgcgccgcctggagaaggagaagatcctggtcttc
actccatcgcggcgtgtccaaggtcggcgcgtcgtttgctacgatgaccgcttcatcgtc
aagctggcctatgagtcagacggcatcatcgtctccaacgataactaccgagacctcgct
aacgagaagcctgagtggaagaagttcatcgacgagcggctgctcatgtactccttcgtc
aatgacaaattcatgcccccagatgaccctcttggtcgtcacggccccagcttggacaac
ttcctgaggaaaagaccggtgatgcctgagcagaagaaacagccgtgtccatacggaaag
aaatgcacttatggtcacaagtgtaagtactaccacccagagagaggagctcagcctcag
cgtgctgtggcagacgagctgcgtgccagtgccaaaacctgtgtcaccacgaaacaccaa
acggacactgggctggtgaagagccacagcgtgccagctggcagcctcgatgcaaaaaaa
ggcgctccgaaaaggcagtcagacccgagcatccgagctctgtcatacagcgatgctgag
gagaagctgctggctaaagggaggctggagagccagaagagcagtttctgtagcagcagt
ggcagtagctgcagtgggagtttaaccatgtctccagcaccagggggtggtcctccatct
ggcctaagccttccgcaggaccagcagtcaagagcaccaactcctcatgctcttccagcc
cccgcccatgacctttaccctcactgtgagtctccagacatgagctactactcagtaacg
cgtgcctactcgggcctgagcctctcctccagacggagcccggactgtcgtttcccaaac
gacacggacctgcggctcggctcgatgggctcagcgggatctgaatgcggcagtgagagc
agcgtgagttgcggcagctgtgactcgtacagtgagaggcagtgtcctggatgccctcct
gacactttactagaagacaacgtccactttgctaaccctcacagccggctgtatccacat
cactcagcatcaaaccatgaactctgcggccttcatcctgctgagtacacaaacatccag
cacagccacacgtctaatcctgcagtgcacagctaccacatgagtttggcacgacagagc
tgtgctcacgatcagcctccacctgaagcccccccaaagcgccctctctaccctttgccc
cctcacctccagcaccagccgcttgctgcacgctccagctgcccaggcgactaccactcc
ctgcctcagtccaaccctcacccccctggctcccctctcggccgctgcctggcccccacc
cgagcagagagcgtgtcagactcacacctgtatgagcacctctcgacatcacaccatcac
caccgcaataaagctttacctggctgggactcgtactacagacagcctccattaccgccg
tccaggtatgagcaatcagcctatcagagcctgcccgacacccgccaatcaacctggcac
gcccctccctgggcgcaggatggctacgctccgcaccactcctctcacccagctctccat
ccgtccccgacgcattacctaaaccacccacctccttcagcccactctgcccacccacct
cacccatccagtacccctctccccccgtacagtgctcacctgtcagtgccctcccatgct
cctccctcttacatgcacacagaatccgcatcacacagccgctacggggacatgagggag
aaagtttacgtcaacctgtgtaacatcttcccctcagagctggtgagccgggtgatggcc
aggagcccccacatcacagacccccagcagctcgcagctgccatcctcgcagagaaagcc
caaacaggatactga
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