KEGG   Semicossyphus pulcher (California sheephead): 138604098
Entry
138604098         CDS       T10596                                 
Name
(RefSeq) integrin beta-3-like
  KO
K06493  integrin beta 3
Organism
spul  Semicossyphus pulcher (California sheephead)
Pathway
spul03266  Virion - Herpesvirus
spul04081  Hormone signaling
spul04145  Phagosome
spul04148  Efferocytosis
spul04510  Focal adhesion
spul04512  ECM-receptor interaction
spul04517  IgSF CAM signaling
spul04518  Integrin signaling
spul04810  Regulation of actin cytoskeleton
spul04820  Cytoskeleton in muscle cells
spul05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:spul00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03266 Virion - Herpesvirus
    138604098
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04081 Hormone signaling
    138604098
   04512 ECM-receptor interaction
    138604098
   04517 IgSF CAM signaling
    138604098
   04518 Integrin signaling
    138604098
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    138604098
   04148 Efferocytosis
    138604098
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    138604098
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    138604098
   04810 Regulation of actin cytoskeleton
    138604098
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    138604098
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:spul04131]
    138604098
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:spul04147]
    138604098
   04515 Cell adhesion molecules [BR:spul04515]
    138604098
   04090 CD molecules [BR:spul04090]
    138604098
Membrane trafficking [BR:spul04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    138604098
Exosome [BR:spul04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   138604098
Cell adhesion molecules [BR:spul04515]
 Integrins
  Integrin beta subunits
   138604098
CD molecules [BR:spul04090]
 Proteins
  138604098
SSDB
Motif
Pfam: Integrin_beta Integrin_b_cyt Integrin_B_tail EGF_integrin I-EGF_1 PSI_integrin EGF_2 EGF_Teneurin EGF_TEN vWA_SIBA-E baeRF_family7
Other DBs
NCBI-GeneID: 138604098
NCBI-ProteinID: XP_069532044
LinkDB
Position
Unknown
AA seq 792 aa
MSGRLRYSPDMGTFLLLFLFLSSTSNVFGSNICTSRGVTTCQQCLAVDPRCAWCSQEEFG
KGGTSVSRCDLKQKLLDGGCNKDALEFPSSTLTIRQDKPLSDKASGPADDVTQIKPQKIQ
MTLRPGDAKQFTVSVKQVEDYPVDLYYLMDLSYSMKDDLALLRTLGNKLAETMGQTTSNL
RMGFGAFVDKTVSPYMYTYPQKAVDNPCIGIRTTCKAQFGFKHVLSLTEEVSSFNTEVGK
QQVSRNRDAPEGGFDAIMQAMVCKDKIGWRPGASHLLVFTTDAKTHIALDGRIAGLVQPN
DGQCYLDDDNVYNKSTVLDYPSFGLITEKMSENNINLIFAVTNYVMPIYEEYSKLIPGTI
VGTLSQDSGNVIQLIVQAYAKIRSKVELELVDVPEELNLSFNATCLKGEVIHGLKSCSGL
KIGDTVSFSVEAQLRGCPKEKSRTFTIKPQGFKDSLEVTVDFACGCSCEAKAETNSSLCS
NGNGTYECGVCQCHSGRLGPRCECSVEDYSPSDDVNCIPKPESPICSGRGDCLCGQCSCH
SNEFGQVWGKYCECDDFNCLRFKGELCSGHGKCNCGFCQCDAGWKGENCNCSTRTDTCMS
SIGLLCSGRGSCQCGVCQCTQPGAYGATCDKCPTCPDSCTIKEKCVECQHFKRGQYMEDK
SCDRICKDEIVLVEKLGYKKNAVNCSYKDENDCVEHFQYFEEETGKSILNVVKDPECPEG
PDILVVLLAVAGAILLLGLVGLLIWKLLVTIHDRREFARFEEERAKAKWDTANNPLYKGA
TSTFTNVAYRGT
NT seq 2379 nt   +upstreamnt  +downstreamnt
atgtcaggtcggctccgttactctccagacatgggaactttcctactactctttctcttt
ttgtcatctacgtcaaacgttttcggctccaacatctgcacgtcacgaggagtcaccact
tgtcaacagtgtttggccgttgatccgagatgcgcatggtgctctcaggaggagtttggg
aaggggggaacaagcgtgtcccgctgcgacctgaagcagaaactgctggatggaggctgc
aataaggacgctctggagtttccgtccagcacgctgactataaggcaggacaaaccgcta
agcgacaaggcctctgggcctgctgatgatgtcacgcagatcaagcctcaaaaaatccaa
atgacactaagaccaggtgatgccaagcagttcaccgtgtcagtgaaacaggtagaagat
tacccagtggacctctactatctgatggatctctcatattcaatgaaggacgacttggct
ctccttcgcaccttgggcaataaactcgctgaaaccatgggccagactacaagcaaccta
cgcatggggtttggagcatttgtggacaaaaccgtgtctccttacatgtacacatatcct
caaaaggcagtggacaacccttgcattggaattagaactacatgcaaggctcaattcggt
ttcaagcatgtgttgtcactgacggaagaggtatcgagcttcaatactgaggtgggaaaa
cagcaggtgtctagaaatagagatgctccagagggtggatttgatgctatcatgcaggcc
atggtgtgcaaggacaagattggctggcgtccgggtgcctcacatcttctggtgttcacc
actgatgccaaaactcacatcgctctggacggacgtatagccggacttgttcagcccaat
gatggacaatgttaccttgatgatgacaacgtttacaacaaatctactgtgctggactat
ccctcctttggcctcattacagaaaaaatgtctgaaaacaacatcaatttaatttttgcc
gtgacgaactatgtgatgccaatttatgaggagtacagcaagctcattcctggcactatc
gtgggaacattgtcgcaagactctgggaatgttattcagctgattgtgcaggcgtatgcg
aaaattcgctcaaaagtggagctggagctcgtggacgtcccagaagagttaaatctctcc
tttaatgccacttgtctgaaaggagaggtcatccacggactgaagtcctgctctggcctc
aagattggtgacacagtgtcgttcagcgtggaggctcagttgcgaggctgccccaaagag
aagagccgcacgttcaccatcaaacctcaaggctttaaggattccctggaggtcacggtg
gattttgcatgtggctgcagctgtgaggcgaaggccgaaaccaacagctccctttgtagc
aacggcaacggcacgtacgagtgcggcgtgtgtcagtgtcactccggtcgcctgggcccg
cggtgtgagtgctcagtggaagactacagtccgtctgatgacgtcaactgcatcccgaag
ccagagagcccaatctgcagcgggaggggcgactgtttgtgcggacagtgctcttgccac
tcgaacgagttcggtcaggtgtggggcaaatactgcgaatgtgacgacttcaactgcttg
cgcttcaaaggggagctgtgttccggtcatgggaagtgtaactgtgggttctgccagtgt
gatgctggctggaaaggagaaaactgtaactgcagcacgcgcacagacacctgcatgtcc
agcattggcctgctgtgcagtggtcggggtagctgccagtgtggggtttgtcagtgcact
cagcctggtgcctacggagcgacgtgtgataaatgccccacctgtcccgattcctgcacg
ataaaagagaagtgtgtcgagtgtcagcacttcaagagaggacagtacatggaagacaaa
agctgcgatagaatctgcaaagatgaaattgttctagtggaaaaactaggctataaaaaa
aacgcggtgaattgctcctacaaagatgaaaatgactgtgtggagcacttccagtatttt
gaagaggaaactggcaaatccatcctgaatgtggtgaaagacccagagtgtcctgagggt
ccagacatcttggtggtgctcttggcggtggccggagccattctgttactgggccttgtt
ggtctgctcatatggaagctgctggtcaccatccacgaccgcagagagtttgccaggttc
gaggaggagagagccaaggccaaatgggatacggctaacaatcctttgtataaaggagct
acctccaccttcaccaacgtagcatacagaggcacctaa

DBGET integrated database retrieval system