Semicossyphus pulcher (California sheephead): 138604193
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Entry
138604193 CDS
T10596
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul00260
Glycine, serine and threonine metabolism
spul00630
Glyoxylate and dicarboxylate metabolism
spul00670
One carbon pool by folate
spul01100
Metabolic pathways
spul01200
Carbon metabolism
spul01230
Biosynthesis of amino acids
spul01240
Biosynthesis of cofactors
spul04981
Folate transport and metabolism
Module
spul_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
138604193 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
138604193 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
138604193 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
138604193 (shmt1)
Enzymes [BR:
spul01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
138604193 (shmt1)
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Paralog
GFIT
Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-GeneID:
138604193
NCBI-ProteinID:
XP_069532161
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All DBs
Position
Unknown
AA seq
482 aa
AA seq
DB search
MSLTNGHHVSKETWDSHNKMMLEPLSVNDSEVFSIIKKEKHRQTYGLELIASENFASRAV
LEALGSCMNNKYSEGYPGQRYYGGTEHVDELERLCQKRALEAYGLDSEKWGVNVQPYSGS
PANFAVYTAIVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPETGLI
DYDRLQENARLFHPRLIIAGTSCYSRNLDYARLKQIANENGAYLMGDMAHISGLVAAGVV
PTPFDHCDIVSTTTHKTLRGCRAGLIFYRKGVRSVDAKGKETLYNLESLINQAVFPGLQG
GPHNHAIAGVAVALKQAMTPEFRAYQTQVLANCQALSKALIDHGYKIVTGGSDNHLILLD
LRSKGSDGGRAEKVLEACAIACNKNTCPGDKSALRPSGLRFGSPALSSRGLVEDDFKKVA
EFIHRAIVLTLEVQRSLDPKATLKEYIQALATGEKFQQRVAEIRAEVEAFAGQFPMPGLP
EL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgtctttaacaaacggccaccatgtcagcaaagaaacatgggactcccacaacaagatg
atgctggagcctctgtctgtcaatgactcggaggtgttttctatcattaaaaaagagaag
cacaggcagacgtacggtctggagctgatcgcgtcagagaactttgccagcagagctgtc
ctggaggctctgggttcctgcatgaacaacaagtactctgagggatatcccggtcagagg
tactatggtggtacggagcatgttgatgaactggagagactctgtcagaagcgagcgctg
gaggcctacggtctggactcagagaaatggggcgtcaacgtgcagccatactcgggctcg
cctgctaactttgcggtctacacggccatcgtggagccccatggcaggatcatgggactg
gacctacctgacggaggtcacctgacacacggcttcatgacggagaagaagaaaatctca
gcgacgtccatcttctttgagtccatgccgtacaaggtgaatccagaaaccggcctcatc
gactacgacagacttcaagaaaacgctcggctgtttcaccccagactcattattgcagga
acaagctgttattcacgcaacctggactacgcccgcctgaagcagattgctaacgagaac
ggtgcctatctgatgggggacatggctcacatcagtgggctggtggctgctggagtggtg
cccaccccctttgatcactgtgacatcgtttccaccacaacgcacaagacgctgcgaggc
tgccgcgctggactcatcttctacaggaaaggtgtgcggagtgtcgacgccaaagggaag
gagactctgtacaacttggagtctttgatcaaccaggctgtgtttccagggctgcaggga
ggaccacacaaccacgctattgccggtgttgctgtagctctgaaacaagccatgacacca
gagttcagggcctaccagacgcaggttcttgctaactgccaagctctgtccaaagccctt
attgaccacggctacaagatcgtcacaggcggctcagacaaccacctgatcctgctggac
ctgcgcagcaaaggatccgatggaggccgagctgaaaaggttctggaggcctgtgccatc
gcttgtaataagaacacctgtccaggggataagagcgctttgcggcccagtggtctgagg
tttggctctccggctctgtcctccagaggcttggtggaggacgacttcaagaaggtggct
gagttcattcacagagctatcgtgctgaccctggaggtgcagagaagcctggatcccaaa
gccactctgaaggagtacattcaggctctggcgacaggagagaagttccagcagcgggtt
gcagaaatcagggcagaggtggaagctttcgccggtcagttccccatgccgggcctgcct
gagctgtag
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