Semicossyphus pulcher (California sheephead): 138604268
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Entry
138604268 CDS
T10596
Symbol
utp18
Name
(RefSeq) U3 small nucleolar RNA-associated protein 18 homolog
KO
K14553
U3 small nucleolar RNA-associated protein 18
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
138604268 (utp18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spul03009
]
138604268 (utp18)
Ribosome biogenesis [BR:
spul03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
138604268 (utp18)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40
WD40_WDHD1_1st
NBCH_WD40
Beta-prop_WDR19_1st
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_NUP159_NUP214
WD40_MABP1-WDR62_2nd
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_EML
Beta-prop_HPS5
Beta-prop_NOL10_N
Beta-prop_TEP1_2nd
B-prop_COPA_B_2nd
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_TEP1_C
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
KNTC1_N
Cytochrom_D1
WD40_like
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
138604268
NCBI-ProteinID:
XP_069532259
LinkDB
All DBs
Position
Unknown
AA seq
533 aa
AA seq
DB search
MEDLSVIKLPATEDREPAKRQKRARPPKFDPEEEEQKRQKNVKSLAVLGEEDSSVKLLEE
LVFGAEEELVERLVEEEEDEEQTRTLLEEEGDEESGESEAEDEARLQPSGGAAAWVDEDD
ELEEDVDMKHRYRKDLIRGETESTMSKQKLQQRMREQFQKSMGGTPSWAQSSDRKKKKKK
DEDDDDGDEEDDELMRRTGNFVASSDSLPSSILRMKKCLHANSARPSEDRLTSVQFHPSA
QVVLTAGLDQSLSLFQVDGKTNPKIQSIHLERFPVHRAQFSSDGETVIATSLKNKMFYLY
DMMEGRVTPVHSIRGLNEARVKEFSVCPEGGALLLTGTNGYLHLLTLKTKEVVRSMKING
NVSGVAFSHDGSKVFANSEEGEVYVWDMRSSRCVNRFTDDGCVKGTSIAASRNGRYLACG
SQSGVVNVYSQEACLNSANPKPLKAIMNLLTSATSLTFNPSSEILAIASRAEDEAVRLVH
LPSLTVFSNFPVSKRKIVYRASCLDFSPHSGFFSLANNKGHAPLFRLLHYKDF
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atggaggacctgagcgttatcaagctgccggcgacggaggacagagaaccggccaagaga
cagaagagggctcgaccaccgaagtttgacccggaggaagaggagcagaaacggcagaaa
aatgtgaagagtctggcggtgctgggagaggaggacagctcggtgaaactgctggaggag
ctggtgttcggggcggaggaggagctggtagagagactcgtggaggaggaggaggatgag
gagcagacgaggactctgttggaggaggagggagatgaagagtcaggggaatcggaggct
gaggatgaagctcgtctgcagccgagcggaggagctgctgcctgggtggacgaggatgac
gagctcgaggaagacgtggacatgaagcatcgttaccgtaaagacctgatccgaggagag
acggagtcgaccatgagcaaacagaaactacagcagaggatgagagagcagtttcagaag
tccatgggaggaactccgtcgtgggcgcagagcagcgacaggaagaagaagaagaagaaa
gatgaagacgacgacgatggcgatgaagaggacgatgagctgatgaggaggacgggaaac
tttgtggcgtcttcagacagtctgcccagcagcatcctcaggatgaagaagtgtcttcat
gctaacagcgcgcgtccatcagaggacagactaacctctgtccagttccacccctccgct
caggtggtcctgacagctggcctcgaccaatcactgtccctcttccaggtggacgggaag
acgaacccaaagatccagagcatccacctggagcgtttccccgtccacagagctcagttc
agctcggacggagagacagtgatcgccaccagcctgaagaacaagatgttctacctgtac
gacatgatggagggtcgcgtcacacctgtccactccatcagaggtctgaatgaagccaga
gtgaaagagttctctgtgtgtcctgaaggaggcgctctgctgctcacaggaaccaatgga
tacctgcacctgctcacactcaagactaaggaggtggtccgcagtatgaagataaacggt
aacgtcagcggcgttgccttctctcacgacggcagcaaagtcttcgccaactcagaggag
ggggaggtgtatgtgtgggacatgcgcagcagtcggtgtgtaaacaggttcacagatgac
ggatgtgtgaaggggacgtccatcgccgcctcacggaacggacgctacctcgcctgcggc
tctcagtcgggcgtggtcaacgtttactcccaggaggcgtgtcttaattcagccaatccc
aagcctctcaaagctataatgaacctgctgacctctgccacctctctgacctttaacccc
tcctctgagatcctggccatcgcctcccgagctgaggacgaggccgtgcggctggtccac
ctgcccagcctcaccgtcttctcaaacttccccgtctctaagaggaagatcgtttatcga
gccagctgccttgacttctccccacacagcggcttcttctcattggctaacaataaagga
cacgcccctctcttcaggttgctgcattacaaagacttctga
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