Semicossyphus pulcher (California sheephead): 138604443
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Entry
138604443 CDS
T10596
Symbol
ciita
Name
(RefSeq) MHC class II transactivator isoform X1
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
spul01001
]
138604443 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
spul04054
]
138604443 (ciita)
Enzymes [BR:
spul01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
138604443 (ciita)
Protein kinases [BR:
spul01001
]
Serine/threonine kinases: Other
TAF1 family
138604443 (ciita)
Pattern recognition receptors [BR:
spul04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
138604443 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NACHT
LRR_6
LRR_4
AAA_16
NPHP3_N
nSTAND3
AAA_22
nSTAND_NTPase5
LRR_14
AAA
NB-ARC
TsaE
Arf
SRP54
Motif
Other DBs
NCBI-GeneID:
138604443
NCBI-ProteinID:
XP_069532480
LinkDB
All DBs
Position
Unknown
AA seq
1458 aa
AA seq
DB search
MQEPVSDNERMVKGNFADEKEWLEQAARRIAVPLWQHWDRGQRMLLPLVPRMATGFATSE
NKETGTEPQCPFLNIEEETELAVACRTLDLYAESFLCTDEEITRFTEGLSTYESDGTTGW
NEDLFDISGSVSCTSPVKASADTKNITDRREDLLNVCSVADRTTDTTEDLLWSMGDKQPD
SAQCFSLSTPGGAQTTTHDISCYSHTDLSMTLGVIGNAENVSRTLHSTKLCCTDGKTKVD
DKKADSHWGATMQEVDLDLLFGPDLGELPDDLSEFLSEDYLKTIDTDVLFGDPWLNGGDE
QNNCIDAPMPTELPSHDGLQQVETEQRTDKTDNRRKSTRVPRLKRCTDENTPSRPKRRRA
AGRPKSIEAEAGSTVTQGTDTGSEPSSAERVGFSTTPQRILHLHPSIQFITIPDAPGYHV
VRTVNLSPPVIGLPLPNTAATPTYIFVPATSPPCKRQVPPLSPVDGAVVPVQMSSSPPGS
LSDTASKAMSPPIASPLSPSNELSASKESALPQSPTVLDIPELVKDYIQEAKAHMSQTCQ
DMEAGLGLTSHYVDVQVSQRQILHSGKQSNKFLDKEMVIMGDTDRQKSLLGRSQIFEGLN
GDKPKRYILLLGNTGMGKTTLIRKLCLDWSKDCIPQFDFVFLLDFKALTLKEAQYSLQTL
LLNHSSFSSSCTDPDAVYDQILAAPKRVLIIFDGFDEVRDYETLLQTQEKDLVASLQKDS
KAQNYTVKQLYSAVLQRVLLPGCTLLLSNRPRGAASQLLRRADCLLEVCGFTPIDVETYL
SRYFTDPAHRESALDYLKKCSYLHLLCWNPGLCRLVCLVLDQAKSLEELPRTLTGLCHQV
LRLKMKKDSGSTHSEAEDHTQISVPSVEETQSHISSSSQQKSHQRNTRSRSQGRTRSYTQ
RSRAKKRGKKDEEIKSDDGEADKIEERDLLLQLSSLAWEGVKASSSILPTGRTISAKLKA
FGHRTGLFLFYHLRRREVVSTDEKEEKGGEKGEETGGGEKTENSDAHDDLILVWANRVLQ
SYLAGVHLSLSRTVTDRAFLQTLPFQPGPKGRRRLQREELELTQRFAVGLLFHNRTALQR
LHSYTEKVFGDMVESKQALCTKHLESLSYGDLSSAQVLEACHYVYEASSTHSGDSRDSDN
TPLVAHLAVHLPEVLTFHGVPLNPSDVFTVQNVLERGGSEGRRFCLDLEDSGIQISGLRA
LVGLNNINTYRACIADVITLWEQLEQTGEEGLLQGAVSKFKIHPLKATQVCHIEHLAKLV
NIHVHKRLSDSSSQSESILAEGVPAVKELHKLEFELGPENGRLALPKLWELLPGLQNLQH
LDLENSKIGDKGADILADALVSHCYLEILNLSQNCIGDQGVKRLATTLRDLPKLHCLSLY
SNVISDEGAESLAAVLPHMSSLTELDVKYNKLTDVGAQSLGASLRSCRKMKTLRMWNQCI
PYGVFERLQQQDNRIEWH
NT seq
4377 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaccagtaagtgataatgaaagaatggttaaggggaattttgctgatgagaag
gagtggttagagcaggctgctagaaggatagctgtgcctttgtggcagcactgggaccga
ggacagaggatgttgctgcccctggttcctcgtatggcgactggctttgcaacaagtgaa
aacaaagagacaggaactgaaccacaatgtccttttctgaatatagaagaggagacagaa
cttgcagtcgcttgcaggactcttgatttgtatgctgaaagctttttatgcacagatgaa
gagattacaaggtttaccgaaggactttctacgtacgaaagcgatgggacgactggatgg
aacgaggatctttttgacatctcagggtcggtgagctgtacctcacctgtgaaagcatct
gcagacacaaaaaacatcacagacaggcgggaggaccttctgaatgtctgttcagtagct
gacaggacaacagacaccacagaggacctgctctggtcgatgggagacaaacaacctgac
agtgcgcaatgcttttctctcagtacacctggaggcgctcaaactaccacacatgatatc
tcatgttactcacacacagatcttagcatgacgttaggtgtaataggtaatgcagaaaat
gtttctaggactcttcacagtacaaaattgtgctgcaccgatggcaaaacaaaagtggat
gacaagaaggcggattcacactggggtgccacaatgcaggaagtggatctggacctgtta
ttcggtccggacctgggagaactaccagatgatttatctgaattcttaagtgaggattac
ctgaagacgatagatacagatgtgctgtttggtgatccgtggcttaacggcggggacgaa
caaaacaactgcattgacgctcccatgccaacagagctgccaagccacgacggactccag
caggtagagacggagcagcgaacagacaaaacagacaacaggagaaaaagtacaagagtg
ccccggttaaaacgatgcacagatgaaaacacaccatcaaggccaaaaaggcgaagagca
gcaggacgaccaaaatccatagaggcagaggctgggtcaacggtcacccaaggcactgac
acgggatcagagccgagttcagcagagagagtcggcttctccaccactccacaaagaatc
cttcacctccatccctcaattcagtttatcaccatcccagatgctccaggttatcatgtt
gttcggacagtgaatctctctcctccagttataggactgccactcccgaatacagctgct
acacctacatacatatttgttcctgcaacatcaccaccctgcaaacgtcaagtgccaccc
ctatctccagtggacggtgcggtagtgccagtccaaatgagctcgtctccaccaggatct
ttgtcagacactgcaagcaaagccatgtccccccctattgcttcacccctctcccccagc
aatgagctgtctgcttccaaggaatcagctctacctcagtcccccacagtccttgatatt
cctgagcttgtaaaggactatattcaggaagccaaagcccacatgagtcaaacctgccag
gatatggaggcgggccttggcctgacctctcattatgtggatgtgcaagtgagccagaga
cagattctacactctgggaaacaatcaaacaaattcctggacaaggagatggtcatcatg
ggagacacagatcggcaaaaaagcttgttggggcggagtcagatcttcgaaggcttaaat
ggagacaagcccaaacgctacatactgctacttggcaatactggcatgggaaaaaccacc
ctgatcaggaaactgtgtcttgactggtccaaagactgcatcccacagtttgactttgtc
ttcttattagatttcaaagctctcactttaaaggaagcacagtatagccttcaaactctc
ctcttaaaccactcctccttttcctcctcctgcacggaccctgacgcagtgtacgatcaa
atccttgctgcccctaagcgagtgctcatcatatttgatgggtttgacgaggttcgggac
tatgaaactttactccagactcaggaaaaagacttggtagcgtcattgcagaaggacagt
aaagcacagaactacacagtgaaacagttatactctgctgtacttcagagggtcctcctt
ccaggctgcactcttctgctttctaaccgaccaagaggcgctgccagccagttactacga
cgagcggactgccttttggaggtgtgtggcttcacccccatagatgtagagacatatttg
tccaggtactttactgatcctgcccacagagaatctgctttggactacttaaaaaagtgc
agctatctacatctcctctgctggaacccaggactatgtcggttggtctgcttggtttta
gaccaggccaaaagtttggaggaactacccagaactttgaccgggctctgccatcaagtg
cttcggttgaaaatgaaaaaggacagtgggagcactcactcagaggctgaagatcacaca
caaatatctgtgccatccgttgaagaaacccagtcacatatctcaagtagttcccaacaa
aaaagtcatcaaagaaatactcgttccaggtcacaaggtcgcactcgctcttacacccaa
cgaagcagggcaaaaaaacgggggaaaaaagatgaagagatcaaaagtgatgatggggaa
gcagataaaattgaggagagagacttgctgctccagctgagttctttggcttgggagggg
gtcaaagcaagctcctccatcctccccacaggacggacaatatctgccaaactgaaggca
ttcggccataggacagggctcttccttttttaccacctgaggaggagggaagttgtctca
actgatgaaaaagaggaaaaaggaggagagaaaggagaagaaactggaggaggagaaaag
acggaaaattctgatgcccatgatgatctcatccttgtttgggcaaaccgggtccttcag
agttacctggctggggtccatttgtctctgtcaaggactgtaacagaccgggcttttctc
cagaccctccctttccagccaggcccaaaggggcgtcggcgacttcaaagagaggagctc
gagctcactcaacggtttgcagttgggctcttgttccacaacagaacagcgctgcagaga
cttcactcatacactgaaaaagtctttggagatatggtggaaagcaagcaggctttatgt
acaaaacaccttgaaagtctctcttatggggacttgagctctgcccaggttctggaggct
tgtcactatgtttatgaggcaagctccacacatagtggcgacagcagggacagtgacaac
acaccattagttgctcacctggcagtgcatcttccagaagtcctcacgtttcatggagtt
ccgctcaacccgtcggacgtgttcactgtgcagaacgttctggaaaggggcggatctgaa
ggtagacgtttctgtttggatctggaggattctgggatacagatctctgggctgagagct
ctggtagggctcaacaacatcaacacatacagggcatgcattgctgatgtcatcacatta
tgggagcagcttgagcagacgggtgaagaggggctcctacaaggagcagtttccaaattc
aagatccaccctctgaaagccacacaggtgtgtcacatagagcacctggctaagctggtg
aacatacatgtgcacaagaggctgtcagacagttccagccaatcagaatccatcttagca
gaaggagttccagctgtcaaagagctacacaagctggagtttgagcttggcccagagaat
ggtcgcctggcccttcccaagctgtgggagctcctgccaggtctacaaaacctacagcac
ctggatctagaaaacagtaaaataggggacaaaggagcagacatattggcggacgctttg
gtctcacactgttacctggagatactcaatctgtctcagaattgtatcggagaccagggg
gtgaagagactggcaacgactttgagggatctgcccaaactgcactgtttaagcctctac
agtaatgtgatttctgatgaaggggcagagagtctagcagccgtcctcccacacatgtcg
tccctcaccgaactggatgtgaagtataacaagctgacagacgttggggcacagagcctg
ggagccagtctgaggagctgtagaaagatgaagactttgaggatgtggaaccagtgtatt
ccatacggagtgtttgagagacttcagcagcaggacaacaggatcgagtggcattag
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integrated database retrieval system
