Semicossyphus pulcher (California sheephead): 138604458
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Entry
138604458 CDS
T10596
Symbol
lrrc4ba
Name
(RefSeq) leucine-rich repeat-containing protein 4B
KO
K16360
netrin-G3 ligand
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04514
Cell adhesion molecule (CAM) interaction
spul04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
138604458 (lrrc4ba)
04517 IgSF CAM signaling
138604458 (lrrc4ba)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
spul04515
]
138604458 (lrrc4ba)
Cell adhesion molecules [BR:
spul04515
]
Immunoglobulin superfamily
NGL family
138604458 (lrrc4ba)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_9
LRR_14
ig
V-set
Ig_2
LRRNT
VEGFR1-3_N_Ig-like
Motif
Other DBs
NCBI-GeneID:
138604458
NCBI-ProteinID:
XP_069532496
LinkDB
All DBs
Position
Unknown
AA seq
734 aa
AA seq
DB search
MRIATLTCLPGPSPFLFLLAQLLLRLLLPGPELVGAASSCPSLCTCSNQASRVICTRQNL
EEVPESISVNTRYLNLQENSIQVIKSDTFKHLRHLEILQLSKNQIRQIEVGAFNGLPNLN
TLELFDNRLTLVPSHAFEYLSKLRELWLRNNPIETLPGYAFHRVPSLRRLDLGELKKLDF
ISDAAFVGLINLRYLNLGMCGLKDIPKLTALVRLEELELSGNRLEIIRPGSFQGLVSLRK
LWLMHSQVSVIERNAFDDLKNLEELNLSHNSLHSLPHDLFTPLHQLERVHLNHNPWICNC
DVLWLSWWLKETVPSNTTCCARCHAPPFLKGKYIGELDQSHFTCYAPVIVEPPTDLNVTE
GMAAELKCRTSTSTTSVNWITPNGTLMTHGSYRVRISVLHDGTLNFTNVTLRDTGQYTCM
VTNAAGNTTATAVLNVTAADASVNYTYFTTVTVETVETPGDEESALVAINETFIRVHPGP
TPSGHLWPEGVSTTASSLSAGWSSSSPRATRPTFTVPITEPGFSGLDDVMKTTKIIIGCF
VAITFMAAVMLVVFYKLRKQHQLHKHHGPARAIEIINVEDELGAGASGRGSGISGGSTMT
QSGNSGIGGGQSLRLHHPEIVNLPNLARSEHLNHYYKTHHFNNNMMGLGLGTGPGVGLNN
NNNPSPCSQNTSISCTQIPTSTSGGMPTGGTLPSPVPLPQLGLHSSLKGLMGKSQNEPLL
FKSGSKENVQETQI
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcgcatcgccacgctgacctgcctgcccggcccctcccccttcctctttctattggcc
cagctgctactgcggctcctcctccctgggccggagctggtgggagccgcctcctcctgc
ccctccctctgcacctgctccaaccaggccagccgcgtcatctgcacccggcagaacctg
gaggaggtgcccgagagcatctcagtgaacacgcgatacctcaacctgcaggagaactcc
atacaggtaatcaagtcagacactttcaagcacttgaggcaccttgagatcctccagctc
tccaagaatcagatccgtcagattgaagttggagcattcaatggcctccccaacctcaac
acactggagcttttcgacaaccgcctcacactggtgccatcacatgccttcgagtacctc
agcaagctgcgggagctgtggctgcgcaacaaccccattgagactctgccgggctatgcc
ttccaccgagtgccctcgctacgtcgcctggacctgggtgagctcaaaaagttggatttc
atctctgatgcagcctttgttggtctcatcaatctacgatacctgaacttgggcatgtgt
gggctgaaggacattcccaaactgacagcccttgtgcgtttggaggaactggagttgtca
ggcaacaggctagagatcatccgaccgggttccttccagggcctggtgtctctccgcaaa
ctgtggctcatgcactcacaggtgtcagtcattgagcgcaacgccttcgatgacctgaaa
aacctagaagagctcaatctgtcccataactctctgcactccttgccccatgacctcttc
acccctcttcaccagctggagagggtccatcttaaccacaacccctggatctgcaactgt
gatgtgctttggcttagttggtggttgaaagaaacggtgcccagcaacaccacctgctgt
gcccgctgccatgctccaccattcttaaaagggaaatacattggagagctggaccagagc
cacttcacctgttatgcacctgtcattgtggagccacctacagacctcaatgtcactgag
ggtatggccgctgagctcaagtgtcgcacaagcacctccacgacatctgtcaactggatc
acccctaatggaactctaatgacccatgggtcttaccgggttcggatatctgtcttgcat
gatggcacgcttaacttcacgaatgtcaccctgcgtgacacgggccaatacacctgcatg
gtaactaatgctgctggcaataccacagcaactgctgtcctcaatgtcactgcagcagat
gccagtgttaactacacctactttacaacagtcaccgttgaaactgtggagaccccagga
gatgaggaatcggcattggtagccatcaatgagaccttcatccgtgttcaccctggccca
actccctcgggccacttgtggccagaaggtgtttctaccacagcctcatctttgtcagcc
ggctggtcctcatcctctcctcgggccactagaccaaccttcactgtgcccatcacggaa
ccaggcttctcaggcctggatgatgtgatgaagaccaccaagatcatcatcggctgcttc
gtagccattaccttcatggcagcggtgatgctggtggtgttctataagttgaggaagcag
caccagctacataagcaccacggccctgcccgtgccatcgagatcatcaatgtggaggac
gagctgggagccggggccagtggtcggggcagtggtatctcaggaggctccaccatgacc
cagagtggaaacagtggaataggaggggggcagagcctcagactgcaccatccggagata
gtcaacttgccaaacctggcccgatcggagcacctcaaccactactacaaaacccatcac
ttcaacaacaacatgatgggcctgggcttgggcacaggtcctggtgtgggcctcaacaac
aacaacaacccctcaccttgctctcagaacacgtccatatcctgtacccagattccaact
tccaccagtggaggaatgcccacaggtggcactctgccctcccccgtgcccctgcctcag
ttgggtctccacagttctctcaaaggccttatggggaaaagccagaatgagcccctgctt
tttaagagcggctccaaggaaaatgtgcaagagactcaaatttga
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