Semicossyphus pulcher (California sheephead): 138604484
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Entry
138604484 CDS
T10596
Symbol
smarca4a
Name
(RefSeq) SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4a isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
spul03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138604484 (smarca4a)
Chromosome and associated proteins [BR:
spul03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
138604484 (smarca4a)
Chromatin remodeling factors
BAF complex
138604484 (smarca4a)
PBAF complex
138604484 (smarca4a)
GBAF(ncBAF) complex
138604484 (smarca4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138604484
NCBI-ProteinID:
XP_069532534
LinkDB
All DBs
Position
Unknown
AA seq
1671 aa
AA seq
DB search
MSTPDPPMGGTPRPGPSPGPGPSPGGMMGPSPGPSPGSAHSMMGPSPGPPGSGHPHPQQG
PSGYPQDNMHQMHKPMEAMHEKGMPDDPRYSQMKSMGMRPGGHAGMAPPPSPMDQHSQGY
PSPLGGSEHAPSPVPASGPPSGPMMPGGPSGPGSGPMEGSGDPNQVMGQPNRGGPQGPGG
PVAAGAGPGGAGGPTPFNQNQLHQLRAQIMAYKMLARSQPLPDHLQMAVQGKRPMPGMQQ
QPMPNMPPTTGPGGGPGAGPGPAQANYNRPHGMVGPNMAPPGPAGVPPGMQGQPTNGPPK
QWPEGPIVNAAAPSNPPQKLIPPQPTGRPSPAPPSVPPAASPVMPPQTQSPGQPAQPPPM
ILHQKQNRITPIQKPRGLDPVEILQEREYRLQARISHRIQELENLPGSLAGDLRTKATIE
LKALRLLNFQRQLRQEVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIE
QERKRRQKHQEYLNSILQHAKDFKEYHRSITAKIQKATKAVATYHANTEREQKKENERIE
KERMRRLMAEDEEGYRKLIDQKKDKRLAYLLQQTDEYVANLTELVRAHKAVQALKEKKKK
KKKKKPETVDGGAAGLGPDGEPLDETSQMSDLPVKVIHVDSGKILTGMDAPKAGQLETWL
EMNPGYEVAPRSDSEESGSDDDEEDEEDDDDHPQASSAQAEEKKKIPDPDSEEVSEVDVQ
HIIEHAKQDVDDEYGNASFNRGLQSYYAVAHAVTEKVDKQSTLLVNGQLKQYQIKGLEWL
VSLYNNNLNGILADEMGLGKTIQTIALITYLMEYKRLNGPFLIIVPLSTLSNWVYEFDKW
APSVIKVSYKGSPAARRAFVPLLRSGKFNVLLTTYEYIIKDKQVLAKLRWKYMIVDEGHR
MKNHHCKLTQVLNTHYLAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNA
PFAMTGEKVDLNEEETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQR
VLYRHMQAKGVLLTDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGY
SGGIVSGPDLYRSSGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRNFKYLR
LDGTTKAEDRGMLLKTFNDPASEFFVFLLSTRAGGLGLNLQSADTVVIFDSDWNPHQDLQ
AQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSGCERRA
FLQAILEHEEQDEVGARGGCRTRGAWEEDEVPDDETVNQMIARSEEEFEQFMRMDLDRRR
EEARNPKRKPRLMEEDDMPSWILKDDAEVERLTCEEEEEKMFGRGSRQRKEVDYSDSLTE
KQWLKVGIYHDLENTVRAKVNPEFDLIISSLQAIEEGNLEDIEEEVRHKKTTRKRKRDRD
HDGGPATPSSSSGRGRDKDDEGKKAKKRGRPPAEKLSPNPLSLTKKMKKIVDAVIKYKDG
SNGRQLSEVFIQLPSRKELPEYYELIRKPVDFRKIKERIRSHKYRSLNDLEKDVMLLCQN
AQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDESEGEESEEEEEDPDEGSESESRSVKV
KIKLSRKEKGDRGGKGQRRRGRGSRAKPVVSDDDSEEEQEEEHSASGSDED
NT seq
5016 nt
NT seq
+upstream
nt +downstream
nt
atgtccactcctgaccccccgatgggagggacacctcggcctggaccctccccaggccca
gggccatctccgggaggtatgatgggccctagtccaggcccctctccaggctcagcccac
agtatgatggggcccagcccaggacctcctggatctggacacccccaccctcaacaggga
ccctcaggatatcctcaggacaacatgcaccagatgcacaaacccatggaagccatgcac
gagaagggaatgcccgatgaccctcgctacagccagatgaagagcatgggcatgagacca
ggggggcacgctgggatggcacctcctccaagcccaatggaccaacattcccaaggttac
ccctctccattgggaggttcggagcacgcacccagccccgtcccagccagcggccctccc
tctggccccatgatgcccggcggtccctctggccccgggtcaggccctatggagggcagc
ggagaccccaaccaggtcatgggtcaacctaaccgtggcggtccccagggtccaggagga
ccagtggctgcaggagcaggaccaggtggtgcaggtggacccactccttttaaccagaac
cagctgcaccagctcagggctcagatcatggcctacaagatgctggctcgcagtcagccc
ctcccggatcacctgcagatggccgtgcaggggaagaggcccatgccggggatgcagcag
cagcccatgcccaacatgccgccgactacagggccaggaggtggacctggggctggtccg
ggaccagctcaggccaactataacagaccacacgggatggtcggtcccaacatggcgcct
cctggacctgcaggagttccccccggtatgcaaggccagcctaccaacggaccccctaaa
caatggcctgaaggaccaatcgtaaacgctgctgccccctccaaccctcctcagaagctg
attccccctcagcccacaggcagaccctctcccgctcctccctccgtgccccccgccgct
tcacccgtcatgcctcctcagacacagtcccctggacagccagctcagccccctcccatg
atacttcaccagaaacagaaccgcattaccccgatccaaaaaccccgcgggctggacccg
gtggagatcctgcaggagagagagtacaggctacaggctcgtatttctcaccgcatccag
gagctggagaacctgcccggctctctggccggcgacctgcgcaccaaggccaccatcgag
ctcaaggccctgaggctgctgaacttccagagacagctgcgtcaggaggtcgtggtctgc
atgcgtcgcgacaccgctttggaaactgccctcaacgctaaagcctacaagcgcagcaaa
cgtcagtctctgcgcgaggctcggatcaccgagaagctggagaaacagcagaagatcgaa
caggagcgcaaacgtcgccagaaacaccaggaatacctcaacagcatcctgcagcacgcc
aaggacttcaaagagtaccaccgctccatcacagccaagattcagaaggcaaccaaagcc
gtcgccacctaccacgccaacaccgagcgcgagcagaagaaggagaacgagcgcattgaa
aaggagcgaatgcggaggctgatggcggaagatgaagaaggttatcgtaaactcatcgac
cagaagaaagacaagcgtctggcctacctgctgcagcagactgacgagtacgtggctaac
ctcaccgagctggtgcgagcccacaaagctgtgcaagctctcaaagagaagaagaagaag
aagaaaaagaagaagcctgagactgtggacggtggagctgctggtctgggacctgatgga
gagcctttagatgagaccagtcagatgagcgacctgccggtgaaggtcatacatgtggac
agtggaaagatcctgaccgggatggacgcaccgaaggccggccagctggagacctggctg
gaaatgaacccgggatacgaagtagcgccgcgttcggacagtgaagagagcggatcagac
gatgacgaagaggacgaggaggacgacgacgatcatcctcaggcctcttcagctcaagcg
gaggagaagaagaagattcctgatcctgacagtgaagaggtgtctgaagtggatgtgcag
cacatcatcgaacatgccaagcaggacgtagacgacgagtacggtaacgcaagcttcaac
cgaggcctgcagtcgtactacgccgtggctcacgccgtcaccgagaaggtggacaaacag
tccacactgctggtcaacgggcagctcaagcaataccagatcaaagggttggagtggctc
gtgtctttgtataataataatttgaatggcatcctggctgatgagatgggtctggggaaa
acgatccagaccatcgccctcatcacttacctcatggagtacaagcgcctcaacgggccc
ttcctcatcatcgtacctctctcaactttatcaaactgggtctatgagtttgataagtgg
gcgccatctgtcatcaaagtctcctacaaggggtctccagctgctcgtcgtgcattcgtt
cccctcttgcgcagcggcaagttcaacgtgctgctcactacatacgagtacatcatcaaa
gacaaacaagtgctggcaaagcttcgctggaagtacatgatcgtggacgagggccatcgt
atgaagaaccaccactgtaagctgacccaggtcctgaacacacactacttggccccgcgc
cgcctgctgctcactggaaccccgctgcagaacaagctgcccgagctctgggccctgctc
aacttcctgctgcccaccatcttcaagagctgcagcacgttcgagcagtggttcaacgcc
ccgttcgccatgaccggagagaaggttgacctgaatgaagaagagaccatcctcatcatc
cgacgtttacacaaagtgctcaggccgttcttgctgcgccgactcaagaaagaagtggag
gcccagctgcccgagaaggtggagtatgtgataaagtgcgacatgtcagcgctgcagagg
gttctgtacagacacatgcaggccaagggagtcttactcacagacgggtccgaaaaagac
aagaagggtaaaggtggcacgaagaccctgatgaacactatcatgcaactgagaaagatc
tgcaatcacccctacatgttccagcacatcgaggagtctttctctgagcatcttggttac
tctggtggaatcgtgagcgggcccgacctgtatcgctcctctgggaagttcgagctgctg
gatcgcatcctgcccaaactcagggccacaaaccacaaagtgctgctcttctgtcagatg
acctcactcatgaccatcatggaggactactttgcctaccgtaacttcaagtacctgcgt
ctggacggaaccaccaaggcggaggatcgcggcatgctgctgaagacgttcaacgacccg
gcctctgagttctttgtgttcctgctcagcaccagggccggcggcctgggcctcaacctg
cagtctgctgacacggtcgtcatctttgacagcgactggaacccacatcaggacctgcag
gctcaggacagagctcaccgtatcggtcagcagaacgaggtgcgcgtgctccgcctctgc
accgtcaacagcgtggaggagaagatcttggcggcggccaagtacaaactgaacgtggac
cagaaggtcatccaggccggcatgttcgaccagaagtcctcaggctgtgagcgccgcgcc
ttcttacaggccattctggagcacgaggaacaggacgaggtcggggctcgaggaggctgc
cgcactaggggggcgtgggaggaggatgaagtcccggacgatgagacggtcaatcagatg
atcgccaggagtgaagaggagtttgagcagttcatgcgcatggatctagaccgacgccgc
gaggaggcccgcaaccccaagaggaaacctcgtctgatggaggaggacgacatgcccagc
tggatcctgaaagatgacgccgaggtggagaggctcacctgtgaagaggaggaggagaag
atgtttggcagaggatcccgccaacgcaaggaagtggactacagcgactcgctcacggag
aaacagtggctcaaggtgggaatttatcatgatctagaaaatacagtgagggcaaaagtg
aatcctgagtttgacctgataatctcctcactacaggccatcgaagagggaaatctggag
gacatcgaggaggaagtgcgtcataaaaagacgaccaggaagcgcaagagagaccgggac
cacgacggcgggccggccacgcccagctccagcagcggccgagggcgggacaaggacgac
gaggggaagaaggcgaagaagcgcggtcgcccgccggctgagaagctctctccaaaccct
ctgtccctgaccaagaagatgaagaagatcgtcgatgcggtcatcaaatacaaggacggc
agcaacgggcgacagctaagtgaagtgttcatccagctgccgtctcgcaaggagctgccc
gagtactatgagctcatccgcaagccggtggacttcaggaagatcaaggagaggatccgg
agccacaagtaccgcagcctgaacgacctggagaaggacgtgatgctgctgtgtcaaaac
gcccagaccttcaacctggaggggtctctgatctatgaggactccatcgtgctgcagtct
gtcttcaccagcgtgaggcagaaaatcgagaaggaagatgagagcgagggagaggagagt
gaagaggaggaggaggatccagacgagggctcagagtctgaatctcgttcagtgaaggtg
aagattaaactgagccggaaagagaaaggcgatcgaggaggaaaaggacaaaggcggagg
ggccgcggttcccgggccaaacctgtggtgagcgacgatgacagcgaggaggaacaggaa
gaggagcactcggccagtggcagcgatgaggactga
DBGET
integrated database retrieval system
