Semicossyphus pulcher (California sheephead): 138604733
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Entry
138604733 CDS
T10596
Symbol
cltca
Name
(RefSeq) clathrin, heavy chain a (Hc) isoform X1
KO
K04646
clathrin heavy chain
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04142
Lysosome
spul04144
Endocytosis
spul05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
138604733 (cltca)
04142 Lysosome
138604733 (cltca)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
138604733 (cltca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spul04131
]
138604733 (cltca)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spul04147
]
138604733 (cltca)
Membrane trafficking [BR:
spul04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
138604733 (cltca)
Exosome [BR:
spul04147
]
Exosomal proteins
Proteins found in most exosomes
138604733 (cltca)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
Motif
Other DBs
NCBI-GeneID:
138604733
NCBI-ProteinID:
XP_069532818
LinkDB
All DBs
Position
Unknown
AA seq
1685 aa
AA seq
DB search
MAQILPIRFQEHLQLQNLGINPANIGFSTLTMESDKFICIREKVGEQTQVVIIDMADPNT
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA
LVTDTAVYHWSMEGDSQPVKVFDRHSSLAGCQIINYRTDAKQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAASFAQFKMEGNTEESTLFCFAVRGQAGGKLHIIEVGTPPTGN
QPFPKKAVDVFFPPEAQNDFPVAMQISSKQDVVFLITKYGYIHLYDLETGTCIYMNRISG
ETIFVTAPHEATSGIIGVNRKGQVLSVCVEEENIIPYITNVLQNPDLALRLAVRNNLAGG
EELFARKFNNLFAAGNYSEAAKVAANAPKGILRTPDTIRRFQGVPTQAGQTSPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKAVDPTLALSVYL
RANVPNKVIQCFAETGQFPKIVLYAKKVGYTPDWIFLLRNVMRINPEQGLQFAQMLVQDE
EPLADITQIVDVFMEYNLIQQCTSFLLDALKNNRPSEGPLQTRLLEMNLMHAPQVADAIL
GNQMFTNYDRAHIAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQICVQVASKYHEQLTTQALTELFESFKSFEGLFYFLGSIVN
FSQDPEVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVVGGLLDVDCSEDVIKSLILVVRGQF
STDELVAEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNNPERFLRENPYY
DSRVVGKYCEKRDPHLACVAYERGQCDQELINVCNENSLFKSLSRYLVRRKDPDLWASVL
LETNPFRRPLIDQVVQTALSETQDPEEVSVTVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYISRLDNYDAPDIANIAISNELYEEAFAIFKKFDVNTS
AVQVLIEHIGNLDRAYEFAERCNEPAVWSQLAKAQLQKELVKEAIDSYIKADDPSAYMEV
VQAADKSGNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFINGPNNAHIQQ
VGDRCYDEKMYDAAKLLYNNVSNFGRLASTLVHLGEYQAAVDGARKANSTRTWKEVCFAC
VDGKEFRLAQMCGLHIVVHADELEELINYYQDRGYFEELITMLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQAHLWAELVFLYDKYEEYDNAIITMMN
HPTDAWKEGQFKDIITKVANVELYYKAIQFYLEFKPLLLNDLLIVLSPRLDHSRAVNFFS
KVKQLPLVKPYLRSVQNHNNKSVNEALNNLFITEEDYQALRTSIDAYDNFDNISLAQRLE
KHELIEFRRIAAYLFKGNNRWKQSVELCKKDKLYKDAMQYASESKDVELAEELLAWFLQE
DKKECFAACLFTCYDLLRPDVVLETAWRHNIMDFSMPYFIQVMREYLSKVDAVKEQVDKL
ETSESVRKEEEQATETQPIVYGTPQLMLTAGPSVPVPPQQAYGYGYQAPAGFSQPAPQPG
FGYGM
NT seq
5058 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatcctgcctattcgcttccaggagcacctgcagctccaaaacttagggatc
aatccagccaacataggcttcagcaccctgaccatggagtcggataagttcatctgtatc
cgggagaaggtgggcgagcagactcaggtggtgatcatcgacatggccgaccccaataca
cccatccgcaggcccatctcagctgacagcgccatcatgaacccagccagcaaagtcatt
gcacttaaagccgccaaaactcttcagatcttcaacatcgagatgaagagcaagatgaag
gcgcacaccatgacggacgatgttaccttctggaagtggatctccctgaacacagttgct
cttgtgactgacactgccgtctaccactggagcatggagggcgactcacagcctgtgaaa
gtcttcgaccgccactccagcctggcgggctgccagatcatcaactaccgaactgatgcc
aagcagaaatggctgctgctcatcggcatctcagcccagcaaaatcgggtggtgggagcc
atgcagctctactctgttgacagaaaggtctctcagcccatcgaaggccatgctgccagc
ttcgcccagttcaagatggagggaaacacagaggagtcgactttgttctgctttgctgtc
agaggccaggctggaggaaagttgcacatcattgaagtggggaccccaccaactggcaac
cagccgtttccaaagaaagcagtggatgtgttcttccctccagaggcccagaacgacttc
cctgtggccatgcagataagctccaaacaagatgtggttttccttattaccaaatatggc
tacattcacctgtatgacctggagacaggcacctgcatctacatgaaccgcatcagtgga
gagaccatcttcgtcactgctccacacgaggccacttcaggcatcatcggagtcaacagg
aagggacaggtgctgtcagtctgtgtggaagaggaaaacatcatcccctacatcactaac
gtgctccagaatccagatctggctctccgcttggctgtccgtaacaacctcgccggcggt
gaagagctctttgctcgcaagttcaacaacctttttgctgctgggaactactctgaggcg
gccaaggttgctgccaatgcaccaaagggtatcctgagaactccagacaccatccgtcgc
ttccagggcgttccaactcaggcaggccagacctcccccctgctgcagtactttggtatc
ctgttggaccagggccagctcaacaagttcgagtccctggagctctgcaggcccgtcctg
cagcagggacgaaagcaactgttggagaagtggctgaaggaagacaagctggagtgttca
gaggaactgggtgacctggtgaaggcagtcgatcccaccttggctctgagtgtctacctg
agggccaacgtccccaacaaagtcattcagtgctttgcagagaccggtcagttccccaag
atcgtcctgtacgccaagaaggtgggctacactccagactggatcttcctgctcaggaat
gtgatgcggatcaacccagaacaaggcctgcagtttgcccagatgctggtccaggatgaa
gagccactggctgatatcacacagatcgtggatgtgttcatggagtacaacctgatccag
cagtgcacctctttcctcctggatgctctgaagaacaaccgaccctcagagggacctctg
cagactcgcctgttggagatgaacctcatgcatgctccacaggttgctgacgctatcctg
ggcaaccaaatgttcaccaactacgaccgtgcccacatcgcccagctgtgtgagaaggca
ggactcctgcaaagagctctggagcactacaccgacctgtacgacatcaagcgtgctgtg
gtgcacacacacctgctcaacccagagtggctggtgaacttctttggctctctgtcggtg
gaggactctctggagtgcctcagggccatgctgtcggccaacatccgccagaacctgcag
atctgcgtccaggtggcttctaagtaccacgaacagctcaccacacaggctctgactgag
ctctttgagtccttcaagagctttgaaggtcttttctacttcctgggctctattgtgaac
ttcagtcaggaccctgaagtgcacttcaaatacatccaggccgcctgcaagacgggccag
atcaaagaggtggagaggatctgcagagagagcaactgctacgaccccgagcgcgtcaag
aacttcctgaaggaagccaagctcaccgaccagctgcccctcatcatcgtctgcgaccgc
ttcgacttcgtccacgacctggtgctctacctgtaccgcaacaacctgcagaagtacatc
gagatctatgtgcagaaggtgaatcccagccgtctgcctgttgtggtcggtggtctcctg
gatgtggactgctccgaggacgtcatcaagagcctgatcctggtcgtgaggggacagttc
tctactgatgagctggtcgctgaggtggaaaagaggaacagactgaagctgctgctgccc
tggctggagtctcgtatccatgaaggctgtgaggagcccgctacccataatgctctggct
aagatctacatcgacagcaacaacaaccccgaacgcttcctgagggagaacccgtactac
gacagccgcgtggtggggaagtactgcgagaagagggacccccacctggcctgcgtggcc
tacgagagaggacagtgtgaccaggagctgatcaatgtctgcaatgagaactccctgttc
aagagcttgtctcgctacctggtccgccgcaaggaccccgacctgtgggccagcgtgctg
ctggagactaaccccttcagacgaccactcatcgaccaggtggttcagacagctctctca
gagacccaggacccagaggaggtgtccgtcacagtcaaggccttcatgaccgcagacctg
cccaacgagctcatcgagctgctggagaagatcgtgttggacaactcagtcttcagcgag
cacagaaatctgcagaacctgctgatcctcacagcgatcaaagccgaccgcacccgcgtg
atggagtacatcagcaggctggacaactacgacgcccccgacatcgctaacatcgccatc
agcaatgagctctacgaggaggccttcgccatcttcaagaagtttgacgtcaacacctct
gctgtgcaggtgctgatcgagcacattggcaacctggaccgggcctatgagtttgcagaa
cgctgcaatgagccggccgtgtggagccagctggcgaaggctcagctgcagaaggagctg
gttaaagaggccatcgactcctacatcaaagctgatgacccctctgcatacatggaggtg
gtgcaggctgctgataagagcggtaactgggaggacctggtgaagttccttcagatggct
cgtaagaaggcccgcgagtcctacgtggagacagagctcatctttgccctggctaaaact
aatcgcctggctgaactggaggagttcatcaacggaccaaacaacgctcacatccaacag
gtcggtgaccgctgctacgatgagaaaatgtacgacgctgctaagctgctctacaacaac
gtctccaactttggtcgtctggcttcgactctggtgcacctcggagagtaccaggctgct
gtggacggagcccgcaaggccaacagcacccgcacctggaaggaggtgtgcttcgcatgc
gtggatggaaaggagttcagactggcccagatgtgtggcctgcacatcgtggtgcacgct
gacgagctggaggaactgatcaactactaccaggaccgcggctacttcgaggagctgatc
accatgctggaggccgctctgggcctggagcgtgctcacatgggcatgttcacagagctg
gccatcctctactccaagttcaagccccagaagatgagggagcatctggagctcttctgg
tccagagtcaacatcccgaaggtcctgagggcagcggagcaggctcacctgtgggccgag
ctggtcttcctgtacgacaagtacgaggagtacgacaatgccatcatcaccatgatgaac
cacccgacagacgcctggaaggagggacagttcaaggacatcatcaccaaggtggccaac
gtggagctgtactacaaagccatccagttctatctggagttcaagcccttgttactgaat
gatttgctgatagtgctttcccccagactggaccactcccgtgctgtcaacttcttcagc
aaggtgaaacagcttcccctggtcaaaccatacctgcggtcagtacagaatcacaacaac
aaatccgtcaatgaagcacttaacaacctcttcatcacagaggaggactatcaggcactg
aggacatcaatagatgcctacgacaacttcgacaacatctcactggctcagcgtttggag
aaacacgagctgatcgagttcaggagaatcgctgcgtacctcttcaagggcaacaaccgc
tggaaacagagtgtggagctctgcaagaaggacaagctctacaaggatgccatgcagtac
gcgtcagagtccaaggacgtggagctggcagaggagctgctggcctggttcctgcaggag
gacaagaaggagtgtttcgccgcctgcttgttcacctgctacgacctgctgcggcccgac
gtggtgctggagaccgcctggaggcacaacatcatggacttttctatgccatacttcatt
caggtcatgagggagtacctcagcaaggttgatgcagttaaggaacaggtagacaaacta
gaaacctcagagtccgtaaggaaagaggaggagcaggcgacagagacgcaacccatcgtc
tacggcactccccagctgatgctgacagcgggccccagcgtacctgtgccccctcagcaa
gcttacggctacggctaccaggcacctgcaggattcagtcagccagcacctcagccaggc
tttggctacggcatgtaa
DBGET
integrated database retrieval system
