Semicossyphus pulcher (California sheephead): 138604798
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Entry
138604798 CDS
T10596
Symbol
pcdh18a
Name
(RefSeq) protocadherin-18a
KO
K16499
protocadherin delta 2
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
spul04515
]
138604798 (pcdh18a)
Cell adhesion molecules [BR:
spul04515
]
Cadherins
Protocadherins
138604798 (pcdh18a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
138604798
NCBI-ProteinID:
XP_069532886
LinkDB
All DBs
Position
Unknown
AA seq
1170 aa
AA seq
DB search
MWKVLAVLALTTQQVSGKTLKYQIYEEQKVGTVIARLRDDVADVLAKLPSSVSLRFRAMQ
RGSSSFLTVREQDGEISIRTKIDREKLCEKNLNCSIQFDVLTLPTEHLQLFHVEVEVLDI
NDNAPQFARAVIPIEISESAAVGARIPLDSATDPDVGENSLYTYALEPNNFFKIDIQSRT
DGAKYAELVVLRELDREVRSGYELQYTASDRGVPPRTGSTLLKISVADSNDNSPIFDKSS
YVINLPENAPVGTLLIDLNATDADDGTNAKIVYSFSSHVSPKIMETFKINPDSGHLTLIR
RVDYETVNSYDIDVQAQDMGPNSMPAHCKILVKVIDVNDNKPDISINLMSSQGNGDAAYI
SEASPLDTFVALVRVEDLDSALNGEVECKLHGQGYFKLQKTYENNYMILTNVTLDREKRS
EFSLTVVAEDKGTPSLSTVKHFTVHVTDENDNPPRFEKGRYEIFKSENNAPGAYLTSILA
TDPDLDANGQVSYSILENFVHGSSISTYVTIDPSNGAIYALRTFDREDVSRISFVVQAKD
AGKPPLLSNATVILNILDENDNPPVIVVPQLWNFTADVRASKFTEAGHLVTMVRATDRDT
GVNAELICSIVSGNEEGFFLIDPRTCEIHANASLENFPHEHVELTVVVRDQGRESLSAKA
VLKLTLYENMENHVQEKDPGESPLDASQIAIISLMAICAVLLVIMGVFAARCNREKKDIR
HSYNCRVAESTHQHHPKKPSRQIHKGDITLVPTVNGTLPIRAHHRSPSATPPMDRAQIGS
RQNHHSRQSLNSLVTISSNHIPESFALELAHATPPVEGQYQPRPSFRGNKYSRSYRYALQ
DMDKFSLKDSGRGDSEAGDSDCDMGRESPVDRLLLGEGFSDLIHLEMHHRLHPAMRLCTD
ECRVLGHSDQCWMPPLASPASSSDYRNNMYIPGEESTQQPQVTDDDQSSVDSERRKSFST
FGKESGTEEAMAGGIVAGGASDACAAGGGAGSLLTEMNSVFQRLLPPNMDSYAECTETSP
PSSSSTMERGSGRSGNIAANHSNNTVPQDSRRGLLPGGKGPAYPPGVAAWAANTHYLNPG
NGSVATNHVSSSSSSSSTSTSTSTNGQPPHLKWLPAMEEIPENYEEDDFDGVFHQGHQGA
KRSESRHEAGMDASDLVHEINKLLQDVRQN
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaagttttggctgttttagcactgacaacacaacaagtctctggtaagactttg
aaatatcagatttatgaggagcagaaggttggcacggttattgcccgtttgagagacgat
gttgctgatgttctggctaaacttccaagctcggtgtcgctccgcttcagagctatgcaa
agagggagctcgtctttcctcacggtgcgcgagcaggacggagaaatcagcatcaggacc
aaaattgaccgtgagaaactctgcgaaaagaatctaaactgttctattcaattcgatgtg
ctgacactccccacggagcacctgcagctgtttcacgtcgaggtggaagtgttggacatc
aacgataacgcaccccagttcgcccgcgccgtcatccccattgagatctctgagagcgcg
gccgtgggagcgcgcattcccctggacagcgccacagaccccgacgtcggggagaactca
ctctacacgtatgccttagagcccaacaacttcttcaagattgacattcagtctaggacc
gacggggcgaagtacgcagagcttgtggtgctcagggagctggatcgggaggtgcgctcc
ggttatgaacttcaatatacggcctctgataggggcgttcccccgagaacgggttcgacc
ctacttaaaatcagtgtggccgactcaaatgacaacagcccaatttttgacaagtcgtca
tatgttataaatctcccagaaaatgcacctgttggcactctgcttattgacttaaacgcc
actgacgcggatgatggcacgaacgccaaaatagtctattcattcagcagtcacgtgtct
cccaaaataatggagacattcaaaattaaccccgatagcggtcacctgaccctcatcagg
cgtgtggactacgagactgtgaactcttatgacattgatgttcaagcgcaggacatgggt
ccaaactccatgccagctcactgcaagatcctggtcaaagtgatagacgttaacgacaat
aaaccagacatcagcatcaacctcatgtcctctcaggggaacggggatgcagcttatata
tctgaggcttctcctttagacacgtttgtagctttggtgcgggtggaggacttggactct
gcgttaaatggagaggtagagtgtaaacttcatggtcaaggatatttcaaactgcaaaag
acatatgagaacaactacatgatattgactaatgtgactttggaccgagagaagaggtca
gagttcagtctgacggtggtggcagaggacaaggggacccccagcctctctactgtcaaa
catttcactgtgcatgttactgatgagaatgacaatccaccacgttttgagaaggggcga
tatgagatctttaaatcagaaaacaatgcccctggagcatatctgacttccatcttggcc
actgaccctgatctagatgccaacggacaggtgagctactccatcttggagaactttgta
cacgggagctccatctccacctacgtcaccattgacccctcaaatggcgccatctatgca
ctacgtacatttgatcgtgaggatgttagtcgtatctcctttgttgtgcaagccaaagat
gcagggaaaccaccactgctcagcaacgccacagttattctgaacattctggatgagaac
gacaaccctccagtcatagtggtcccccagctgtggaacttcactgctgatgtacgtgca
tcaaagttcactgaggctggacacttagtaaccatggtcagggcaactgatcgtgacaca
ggggtcaacgctgagctcatctgctcaatcgtcagtggcaatgaggaaggcttcttcctc
attgatccaagaacttgtgagatccatgccaatgccagcctggagaacttcccccatgaa
cacgttgagctgacagtggtggtccgagatcaaggaagggaaagtcttagtgctaaggca
gtgctaaaactcactctctatgagaacatggagaaccacgtccaggagaaggacccaggg
gagtctccccttgatgcatcccagattgccatcatctccctgatggccatttgtgctgtg
ctcctggtcatcatgggggtgtttgccgctcgctgtaaccgggagaagaaggacataagg
cactcctacaactgccgagtggctgaatccacccaccagcaccatcccaagaagccctcg
cgccaaatccataaaggtgatatcacccttgttcccacggtgaatggcaccctgccaatc
agagctcaccacagatcaccttcggccacgccccccatggaccgggctcagattggaagt
cggcagaatcaccacagccgccagtctctaaacagcctagtgaccatctcatccaatcac
attccagagagctttgcactggagctggcgcacgcaactcccccagtggagggccagtac
cagcccagacccagtttccgtggcaacaaatactcccgaagctacaggtatgcattacaa
gacatggacaagttcagcctgaaggacagtggccgtggggacagcgaggcgggggacagt
gactgtgacatggggcgggaatcccccgtggacagactgctgctgggggagggcttttct
gatctgatacaccttgaaatgcaccatcgactccacccagctatgagactgtgcacggat
gaatgtcgcgtcctgggacactctgaccagtgctggatgcccccccttgcctcgcctgct
tcttcctctgactaccgcaacaacatgtacatcccaggggaggagtccacccagcagccc
caggtgactgacgatgaccagtcctctgttgactcggagcgccgcaagagcttctccact
tttggcaaagagtctgggaccgaagaggcgatggccggtggaattgttgctggaggagca
agtgatgcttgtgccgctggaggaggggctggctccctcctcacagagatgaactctgtg
ttccagcgcctcctcccgcctaatatggactcatacgcagagtgcactgaaacaagccca
ccctcatcctcatcaaccatggagagaggaagcgggcgtagtggaaacattgctgctaac
catagtaacaacactgttccccaggacagccggagggggttgttgccaggtgggaaaggt
cctgcttaccccccaggtgtggctgcatgggcggccaatacccactatttaaatcctgga
aatggatctgtggcaaccaatcatgtttcctcctcttcttcttcatcgtcaacctccact
tccacctccaccaatggacagccgccacacctcaaatggctgccagccatggaggaaatc
ccagagaattatgaggaggatgactttgatggcgtcttccatcagggtcaccagggtgcc
aaacgcagcgagagccgccacgaggccggcatggacgctagtgacctggttcacgagatc
aacaaactgctacaggacgttagacagaactag
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