Semicossyphus pulcher (California sheephead): 138604886
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Entry
138604886 CDS
T10596
Symbol
exosc9
Name
(RefSeq) exosome complex component RRP45
KO
K03678
exosome complex component RRP45
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138604886 (exosc9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spul03019
]
138604886 (exosc9)
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
138604886 (exosc9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
138604886
NCBI-ProteinID:
XP_069533022
LinkDB
All DBs
Position
Unknown
AA seq
433 aa
AA seq
DB search
MKDTPLSNCERDFLLKAIEEKKRLDGRQTYDYRKMKITFGTDFGCCYVDLGKTRVMAQVS
CELVAPKESRPNEGIMFFNIELSPMASPAFEQGRQSELSVKLNRQLERCLRNSKCIDTES
LCVVSGEKVWQIRVDVHMLNHDGNLMDAASIAAITALCHFRRPDVGIQGDEVTVYSPEER
DPIPLSIYHMPISVSFSFFQQGTYLLVDPCEREERIMDGLLMIAMNKHREICSIQSSGGI
MLLKEQVMRCSKIASVKVSEITELISKALENDKKARKAGERCGFAESMPQERITALKMDE
TSVEMTDVTDRANDIVQKAEAPLQTVPSPVVPAPGVGQVGQGLQNTWGLEEDDEEEEEEN
DNSGEEREENVTRMEEDQHDKVESRGGDVVEISDSEEEEVVILQPEMIDKAPKNTGSSSH
QKGAAASKKRQKK
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgaaggacacgccgctgtctaactgtgaacgggatttcctgctcaaagccattgaagag
aaaaagcgcctggatggccgacagacttatgactacagaaagatgaagatcacatttggg
acagactttggttgctgctatgtggatctcgggaaaaccagggtcatggcccaggtgtcg
tgtgagctggtggctcctaaagaaagtcggccaaatgagggaatcatgttcttcaatatc
gagctatcacccatggcttcaccagcatttgaacagggcagacagtctgagctgtcagtg
aagctaaaccgacagctggagagatgcttgaggaactccaagtgcattgataccgagtcc
ctgtgtgtggtgtctggagaaaaggtgtggcagatcagagtagacgttcacatgctgaat
catgatgggaacctgatggatgctgccagcattgctgccatcactgctctgtgccacttc
agacgccctgatgtgggcatccagggggatgaagtcacagtgtacagtccagaggagaga
gatcctattcctctgagtatctaccacatgcccatcagtgtcagcttctcctttttccaa
caaggaacctatctactggtggacccctgtgagcgggaggagcggataatggatggcttg
ctgatgatcgccatgaacaaacacagagagatctgctccatccagtccagcgggggcatc
atgttgcttaaagagcaggttatgagatgcagtaaaatagccagcgtcaaagtgtctgaa
atcacagaactcatcagcaaagccttggagaatgacaaaaaagcaaggaaggcgggtgaa
aggtgtggttttgcagagtcaatgcctcaggagcgaatcacagcgttgaaaatggatgag
acatctgtagagatgactgatgtgacagatagagccaatgacatcgtccagaaagcagaa
gccccgcttcagacggtgccttccccagtggtgcccgcacccggtgtgggtcaggtaggg
cagggactgcagaatacctggggactagaggaggatgatgaagaggaagaggaggaaaat
gacaacagtggtgaagaaagagaggaaaatgtgacaagaatggaagaggatcagcatgac
aaagtggaaagcagaggaggagatgtggttgagatatctgacagtgaagaggaggaagtg
gtcatactccaaccagagatgatagacaaagctccaaaaaatacaggatctagttcgcac
cagaagggggcagcagcatcaaagaaaagacagaaaaaataa
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