Semicossyphus pulcher (California sheephead): 138604988
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Entry
138604988 CDS
T10596
Symbol
pcdh10a
Name
(RefSeq) protocadherin-10a isoform X1
KO
K16499
protocadherin delta 2
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
spul04515
]
138604988 (pcdh10a)
Cell adhesion molecules [BR:
spul04515
]
Cadherins
Protocadherins
138604988 (pcdh10a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
DUF4832
Motif
Other DBs
NCBI-GeneID:
138604988
NCBI-ProteinID:
XP_069533142
LinkDB
All DBs
Position
Unknown
AA seq
1053 aa
AA seq
DB search
MICLIFLLSILDGAVSQLHYSVPEEQEPGSVVGNIAEDLGLDITKLSARRFQTVPSSRTP
YLEVNLENGALVVKEKIDREEICKQTIPCLLHLEVFLENPLELFRVEIEVMDINDNPPIF
PETDISVEISESAIPGTRFPVENAFDPDVGTNALSTYAITNNNYFYLDVQTQSDGNKFAE
LVLEKSLDREQQAVHRYVLTAVDGGIPQRTGTALLVVKVLDSNDNAPTFDQTVYSVNLRE
NSPVGTLVIQLNATDVDEGQNGEIVYSFSSHNTPRIKDLFNIDARTGRIEVAGEVDYEES
STHQIYVQAKDLGANAVPAHCKVLVKLVDVNDNTPEIGFSTVTESVSEQDAPGTVIALFS
VSDRDSGENGHMSCEILGDVPFKLKSSFKNYYTIVTDGPLDRENTDAYTITVVAKDKGQP
SLATSKSIKVHVSDENDNAPRFTQAVYDVYVTENNVPGAFIHAVSALDPDIGQNALITYS
ILECDIQGMSVDTYVSINQDTGYLYALRSFDYEQLKEFSFMVQAKDSGAAELFSNATVNV
IIVDQNDNAPTVIAPIGKNGTAKEHLPRSAEPGYLVTRIVAMDADDGENARLSYSILRGN
EMGMFRMDWRTGELRTARRISPKRDPQGYYDLLIEVRDHGQPPLSSSASVSVILVDSVVE
GRSGDRGSASRAKETSLDLTLILIIALGSVSFIFLLAMIVLAVRCQKDKKLNLYTCLLAG
DCCLCCGSCCSRGARGRKQKKLSKSDIMLVQSTNVTSGVGPVGQVPVEESGVGGVGGGFG
SHHHQNQNSYCYQVCLTPESAKTDLMFLKPCSPSRSNDTDHTNPCGAIVTGYSDQQPDII
SNGSILSNETKHQRAELTYLVDRPRRVNSSAFQEADIVSSKDSGHGDSEQGDSDHDATNR
GHSAGADLFSNCTEECKALGHSDRCWMPSFVPSDGRQGPDYRSNLHVPGMDATLPDTEVP
SSVNLSDQLTMTSSTVSTTDRSFSTFGKDGQRSQSHHSLHHHLHQQQQQYSSSTLERKEY
DRGTLPYKPTFLCEYQYESSLGPYDFGLVQYRY
NT seq
3162 nt
NT seq
+upstream
nt +downstream
nt
atgatttgtttaatattcctgctgtccatcctggatggagctgtctctcagctacactac
tccgtgccagaggaacaggaacctggctctgtggttgggaatattgcagaggatttgggg
ttggacattaccaaactttccgctcgccgctttcagacggtgcctagttcaagaacacct
tatctggaggtgaacttagaaaacggagcgcttgtggtgaaggagaaaattgaccgggaa
gaaatctgtaagcagaccatcccgtgcctattgcacctggaggtgtttctggagaacccg
ctggagctctttcgcgtagagattgaggtgatggatatcaacgacaatccgcccatcttt
ccagagacagacatttccgtggagatatcggaaagcgcaatccccgggacccgtttcccg
gttgaaaatgccttcgaccctgacgtgggcacaaacgcgctcagcacatatgccataacg
aataataactatttttacctggatgtgcagacacagagcgacgggaacaagttcgcagag
ctggtgctggaaaagtcactggacagggagcagcaggcggtgcatcgctacgtgctgaca
gctgtggatggaggcatcccgcagcggaccgggacggctctcctagtcgttaaagttctg
gactctaatgataacgcgcccacctttgaccagactgtgtactctgtcaacctgcgtgaa
aactctcctgttggcactttggtcatacagctcaacgccactgatgttgacgagggacaa
aacggggaaattgtttattctttcagcagtcacaacaccccgcggataaaggacttattc
aatattgatgcaagaacaggtaggatagaggtcgccggtgaggtggactatgaagagagt
agcacgcatcagatttatgtccaggctaaagatcttggggctaatgcagtccccgctcac
tgcaaagtgctggtcaaactggtggacgtgaacgacaacacaccagagatcggtttcagc
acagtgacagaatccgtgagcgagcaggatgccccgggcaccgtgatcgcactttttagt
gtctcagaccgagactctggtgagaatggacatatgagctgcgagatattaggagatgtt
cctttcaagctgaaatcgtcttttaaaaactactacaccatcgtgactgatggaccgctg
gacagagagaacacagatgcttataccatcactgtagtggccaaagataagggtcagcct
tcgctcgccaccagcaagtcgattaaagtgcacgtctccgatgagaatgacaatgcgccc
cgttttacgcaagctgtttatgatgtgtatgtgactgagaataatgtgcctggtgctttt
attcacgctgttagtgctttggaccctgatataggacagaacgctctcataacttactcc
atattggagtgtgacatacagggcatgtctgtggacacttatgtgtccataaaccaggac
accggctacctttatgcgctgcgctcttttgattacgagcaactgaaagagtttagcttc
atggtccaggcaaaagactccggtgcggctgagctcttctccaatgccactgtaaatgtt
attatcgttgaccaaaatgacaacgctcccactgtaatagcccccatcggtaaaaacggc
acagccaaagagcacctgccgcgctctgcggagcccggctacctggtgacgcgcattgtg
gccatggatgcggatgacggcgaaaacgcccggctgtcatacagcatcctgcggggcaac
gagatggggatgttccgcatggactggaggacaggagagttgaggacagcccggaggatc
tctcccaagcgggacccgcagggctactacgacctgctgattgaagtgagggaccacggg
cagccccctctctcctcctcggcaagtgtgagtgtaattttagtggacagtgtggtcgaa
ggccgcagtggggatcgcggctcggcctccagggcaaaggagacctcccttgacctcacc
ctcattctcatcatcgccttgggctccgtgtccttcatcttcctcctggctatgatcgtt
ctagccgtgcgctgccagaaggacaagaagctcaacctgtacacgtgtctgctggccggt
gactgctgcctgtgctgcggctcctgctgtagcaggggggctcgcggccggaaacagaag
aagctgagtaaatccgacatcatgttagttcagagcaccaatgtgacgtcaggggtcggg
ccggtggggcaggtgcctgtggaggagtctggtgtgggcggcgtgggagggggcttcggt
tcccaccaccaccagaaccagaactcctactgctaccaggtgtgtttgacaccggagtcc
gccaaaacggatctgatgttcctcaaaccgtgtagcccctcccgcagtaatgacacggat
cacaccaacccttgcggcgccatagtcacgggttacagtgaccaacaaccggacatcata
tccaacggcagtattctgtcgaatgagacaaaacaccaacgagcagaactcacctatctg
gtggacagacccagacgtgtcaacagttcggcattccaagaggcagacattgttagctcc
aaagacagtggtcatggtgacagtgagcaaggcgacagtgaccacgatgccaccaaccgg
ggtcattcggccggggctgaccttttttccaactgcacggaggagtgcaaagccctgggc
cactccgaccgctgctggatgccatcctttgtgccgtctgacgggcgccaggggccggac
taccgcagcaacctgcacgtccccggcatggatgccacgctccccgacactgaggtaccc
tcctccgtcaacctctccgaccaactcaccatgacctcgtccactgtctcgaccaccgat
aggtcattctccacctttggcaaggacggtcaaaggtcacagtcacaccacagccttcac
catcacctccatcagcaacagcagcagtacagctccagcacgctagagaggaaagagtat
gatagggggaccctaccgtacaaacccacctttctctgtgagtatcagtatgaaagttcc
ctgggaccctatgactttggtctggtccagtacagatactaa
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