Semicossyphus pulcher (California sheephead): 138605058
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Entry
138605058 CDS
T10596
Symbol
vldlr
Name
(RefSeq) very low-density lipoprotein receptor isoform X1
KO
K20053
very low-density lipoprotein receptor
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
Membrane trafficking [BR:
spul04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
138605058 (vldlr)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138605058
NCBI-ProteinID:
XP_069533235
LinkDB
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Position
Unknown
AA seq
1339 aa
AA seq
DB search
MVTSTPGILLLPMLICLQHCINVHGTKTECEANQFQCGNGRCIPSVWQCDGDEDCSDGSD
ENSCVKKTCAESDFVCRNGQCVPKRWHCDGEPDCEDGSDESQNICYMRTCRMNEFSCGVG
STQCVPIFWKCDGEKDCDNEEDEVNCGNVTCAPNEFTCASSRCISRNFVCNGEDDCGDGS
DEVECAPSSCGPSEFQCGNSSCIPASWVCDDDVDCQDQSDESPSRCGRHPTPPAKCSSSE
MQCRSGECIHKKWRCDGDPDCKDGSDEANCPVRTCGPDQFKCDDGNCILGSRQCNGLRDC
SDGSDEVNCKNMTQCNGPEKFKCRSGECIEMSKVCNKARDCPDWSDEPIKECNLNECLMN
NGGCSHICKDMVIGFECDCTPGLQLIDHKTCGDINECLNPGICSQICINLKGGYKCECHN
GYQMDPTTGVCKAVGKEPCLIFTNRRDIRRLGLERKEYTQIVEQQRNTVALDADFDQQMI
FWADLGQKAIYSTVLDKRGEVSTHNKVIDNVQTPVGVAVDWIYKSLYWSDLGTKTISVAN
FNGTKQKVLFNRGLKEPASIAVDPLSGFLYWSDWGEPAKIEKSGMNGVDRQVLVASDIQW
PNGITLDLIKGRLYWVDSKLHMLCSVDLNGDNRKKVLQSSDYLAHPFALTVFEDRVFWTD
GENEAIYGANKFTGSDVVTLASNLNDPQDIIVYHELIQLSGTNWCAEKGENGGCSYMCLP
APQINKHSPKYTCVCPEGQELAADGLRCRPEPSTKGPSKDAGKALIQPPKEANVSTSIQV
DSTARGSAAAWAILPVLLLAMAAAGGYLMWRNWQLKNQKSMNFDNPVYLKTTEEDLNIDI
TRSTFVKPWSSMQDLSRDIYDLYAEYEEEEEAEDRCPVSHSCLLLSPTKHFTLNINVGGT
VYHLPYSLAARYPTTRIGRLATYTDHNRQLDLCDDYIVQSKEFFFDRDPKIFHNIFNFYR
TGVLCIKDELCPRNFLEEINYWGVRIKNSQRCCRISFEERQDELNEQLKIQKQLIAEVEM
EENEVLFHDMALGSIRRKIWNLMENPFSSITAKLMGVASSMFVLVSLVAMTLNTVEEMQY
KTASGQPSGRFYGEYVETFCITFFTVEYLLRLASTPDIRCFGRSVLNTVDLVAILPHYLQ
MMLECFEDQDIHPHSGDIETVARVGKVGQVLRIMRLMRIFRILKLARHSTGLRAFGFTLR
QCYQQVGCLLLFIGMGIFVFSAMVYTVEHDVYNTNFTSIPNAWWWAAASISTVGYGDMFP
ETNLGRIFAFGCISFGVILNGMPISILYNKFSDYYTKLKSHEYTAVSKARGKVHFARRAA
KRLAECCEDAVQPRTYRLQ
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atggtcacgtccacaccggggatccttctgctgccgatgctaatatgtctccagcactgc
attaacgtccacggtacaaagacagaatgtgaggccaaccagtttcagtgtggaaacggt
cgctgcatcccgtccgtctggcagtgtgacggtgacgaggactgcagcgacggcagcgac
gagaactcctgtgtgaaaaaaacctgtgcggagtcggactttgtgtgtcgcaacggccag
tgtgttcctaagcgatggcactgcgatggggagccggactgcgaggacgggtcagacgag
agtcaaaatatctgctacatgaggacgtgtcgcatgaatgagttcagctgcggcgtgggc
tccactcagtgtgtccccatcttctggaagtgtgacggagagaaggactgcgacaacgaa
gaggatgaggtcaactgtggtaatgtcacctgtgcaccaaatgagttcacgtgcgccagc
agccgctgcatctcccggaactttgtgtgtaacggtgaggacgactgtggcgacggctct
gatgaggtggagtgcgctccgtcgtcctgtggtcccagtgagttccagtgtgggaactca
tcgtgcattccagccagctgggtgtgtgacgacgacgtcgactgccaggaccagtcagat
gagtctccgtcccgttgcggccgccatccgacgcctccggccaagtgttcgtccagcgag
atgcagtgccgctctggagagtgcattcacaagaagtggaggtgtgatggagaccccgac
tgcaaggacggcagcgatgaagccaactgtcctgtacgcacctgcggaccggatcagttc
aaatgtgatgatggaaactgtatcctgggcagcagacagtgcaacggcctccgagactgc
agcgacggatcagacgaagtcaactgcaaaaacatgactcagtgtaacgggccggagaag
ttcaagtgtcgcagcggggaatgtatcgagatgagcaaagtgtgcaacaaggccagagac
tgtcccgactggagcgacgaacccatcaaggagtgcaatctaaacgagtgtctcatgaac
aacggcggctgctctcacatctgcaaagacatggtgatcggtttcgaatgcgactgcaca
cctggacttcagctcatcgaccacaagacctgcggagacatcaatgagtgtctgaacccc
ggcatctgcagtcaaatctgcatcaacctgaagggagggtacaagtgcgaatgccacaac
ggctaccagatggatccgaccaccggagtctgcaaggctgttggtaaggagccctgcctg
atcttcactaaccgccgtgacatccgccgtctgggtctagagaggaaagagtacactcag
attgtggagcagcagaggaacacagtggctctggatgcagacttcgaccagcaaatgatc
ttctgggctgacctgggacagaaggccatttatagcactgtactggacaaacgaggggaa
gtcagcacccacaataaagtgatagacaacgttcagacccctgtgggagttgcagtggac
tggatctataagagcttgtactggtctgatctcggcacaaaaactatttctgttgccaac
ttcaacggaaccaagcagaaagttctgttcaacagaggcctcaaagaaccggcatccatc
gctgtggatccactgtcggggtttctctactggtctgactggggcgagccggccaagatt
gagaaatctggtatgaacggagtggacagacaggttctggtggcgtcagacatccagtgg
cctaatggaattaccctggatctgatcaaaggccggttgtactgggttgactccaagctg
cacatgctctgtagcgtcgaccttaatggagacaacaggaagaaagtcctgcagtcctct
gactacctggctcatcccttcgctcttacggtttttgaggatcgagtcttctggacagac
ggggaaaatgaagccatctacggcgcgaacaagttcaccggctctgatgtggtgacgctg
gccagcaacctgaatgacccccaagacatcatagtgtaccatgagctgatccagctgtca
ggaactaactggtgcgcagagaaaggtgaaaacggaggctgtagctacatgtgtctgccc
gctccacaaatcaacaaacattcccccaaatacacgtgtgtgtgtccagaaggacaggag
ctggctgcagacggcttacgctgcagacctgaaccttctaccaaaggtccctcaaaggat
gctgggaaagctctaatacagccacccaaagaagccaacgtgagcacctcaatccaggtg
gactccacagccagaggatctgctgctgcctgggccattctgcctgtcttgctgctggcg
atggcggcagcgggcggctacctgatgtggagaaactggcagctgaagaaccagaagagc
atgaactttgacaaccccgtctacctgaagactacagaagaagacctcaacatcgacatc
acgcgcagcacctttgtgaagccatggagctccatgcaggatctgagcagagacatatat
gatctttacgctgagtatgaagaggaggaggaggcggaggatcgatgcccggtgtctcat
tcctgcctgctgctctctccaaccaaacacttcacgctcaacatcaacgttggaggaacg
gtgtaccacttgccctacagtttagctgccaggtatccaacgaccaggatcggccggttg
gccacatacacagaccacaacaggcagctggacctgtgtgacgactacatcgtccagagc
aaggagttcttctttgaccgagaccccaaaatcttccacaacatcttcaacttctacagg
actggagtgttgtgcattaaagacgagctttgtccacgaaacttcctggaggagatcaac
tactggggcgtcagaattaagaacagtcaacgctgctgccggatctccttcgaggagagg
caagacgagctgaacgagcaactgaaaatacagaaacagctgatagcggaggtggagatg
gaggagaacgaggtgttgttccacgatatggctttggggtcgattagaagaaaaatctgg
aacctgatggagaacccgttctcctcgatcaccgccaagctgatgggggtcgcctcctcc
atgttcgtgctcgtctcactggttgcaatgactctaaacactgttgaggagatgcagtac
aagacagcatcaggtcagcccagcggcagattctacggcgagtacgtggagactttctgt
atcacctttttcacggtggagtacctgctgcgcctggcctccaccccggacatcaggtgt
tttggacgcagtgtgctgaacaccgtcgacctggtcgccatcctgccgcactacctgcag
atgatgctggagtgcttcgaggaccaggacatacacccgcactcgggggacatcgagact
gtggcacgagtcggaaaggtgggtcaggttctgaggattatgcgtctcatgcgaatcttc
aggatcttgaagctggctcgtcattcgacaggcctcagagccttcggcttcacactgaga
cagtgctaccagcaggtgggctgtttgctgctcttcatcggcatgggcatcttcgtgttc
tcagccatggtgtacaccgtggagcacgacgtgtacaacaccaacttcacctccatacca
aacgcatggtggtgggctgctgcgagcatttccaccgtgggctatggcgacatgtttcct
gagaccaacctgggccgtatctttgccttcggctgcatctccttcggcgtcatactgaac
ggtatgcccatctccatcctctacaacaagttctcagactactacaccaagctcaagtcc
cacgagtacaccgccgtcagcaaggcccgggggaaggtgcactttgccaggagggcggct
aagaggctggccgagtgctgcgaggacgccgttcagccgaggacataccgcctgcagtga
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