Semicossyphus pulcher (California sheephead): 138605085
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Entry
138605085 CDS
T10596
Symbol
chd1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spul03021
]
138605085 (chd1)
03036 Chromosome and associated proteins [BR:
spul03036
]
138605085 (chd1)
Transcription machinery [BR:
spul03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
138605085 (chd1)
Chromosome and associated proteins [BR:
spul03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
138605085 (chd1)
SLIK complex
138605085 (chd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_Hrp3
CDH1_2_SANT_HL1
Helicase_C
CHD1-like_C
Chromo
HDA2-3
ResIII
DEAD
Motif
Other DBs
NCBI-GeneID:
138605085
NCBI-ProteinID:
XP_069533271
LinkDB
All DBs
Position
Unknown
AA seq
1823 aa
AA seq
DB search
MAGRSEDESVSNSSGESSNSDDESGSGSGSASGSGSGSSSSSSSSSSQSGSSDSGSGSDS
GSQSDSDNEKSKEKMEPPNKSNIDGAEFWKSNPSILAVQRSAMLRKQQLQQQQQQQQQQQ
QRQSSSNSGSDEDSSSSDDSDSSSGSKRRRNSGSSDSGSGSGSGSGSGSDSSAEENSDET
ASDYEPSHKIKSKKPPTKMNFRNGKKSSNQKKKTQKCSSSDDEDGNYKKVAAAGPRRQAT
VNISYKEDEELKTDSDDLVEVLGEDVPQPEEDEFETLERVMDSRIGRKRATGSVTTVYAV
EADGDPNTNFNSNKEAGDIQYLIKWKNWAHIHNTWETEETLKLQNVKGMKKLDNFKKKDQ
EKKKWLKAASPEDIEYFNCQEELMDDLHSQYQLVERIIGHSNQKSAAGYPDYLCKWQGLP
YSECSWEDGALISKKFQKCIDDYMSRNQSKTIPFRDCKVLKQRPRFVPMKKQPTYIGGDG
LELRDYQLDSLNWMAHSWCKGNSCILADEMGLGKTIQTISFLNYMFNDHQLYGPFLLVVP
LSTLTSWQREIQLWAPQMNVVVYLGDISSRNMIRTHEWMHVHNKRLKFNILLTTYEILLK
DKSFLGNVNWAFIGVDEAHRLKNDDSLLYKTMIDFKSNHRLLITGTPLQNSLKELWSLLH
FIMPEKFHSWEMFEEEHGKGRDSGYTSLHKELEPFLLRRVKKDVEKSLPAKVEQILRVEM
SAIQKQYYKWILTRNYKALSKGTKGSTSGFLNIMMELKKCCNHCYLIKPPEDNEFFNRAE
ALQQLIRSSGKLVLLDKLLVRLKERGHRVLIFSQMVRMLDILAEYLKSRQFLFQRLDGSI
KGEMRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARA
HRIGQKRQVNIYRLVTRGSVEEEIIERAKKKMVLDHLVIQRMDTTGKTVLHTGAAPSSSA
PFNKEELSAILKFGAEELFKELEGEEQEPQEMDIDEILKRAETRENDPGPSTVGEELLSQ
FKVANFSMMEEEEIDIDSERSQRSWDDIIPEEQRRRMEEEERQKELEEIYMLPRMRNCAK
QISFNTSGGRQSRNRRYSGSDSDSPSDRKRPKKRGRPRTIPRENIKGFSDAEIRRFVKSY
KKFGGPLERLDAIARDAELVDKSEHDLKRLAETVHNGCVRTLRENPCGPEKNSGGRRGKV
KGPTFRISGVQVNAKLVISHEEELAPLHKAIPADPEERKKYMIPCHSKAAHFDIDWGKED
DSSLLIGIYEYGYGSWEMIKMDPDLNLTHKLLPDDPDKKPQAKQLQTRADYLIKLLSKDL
AKREAQKQAGTANSRKRKPRSKKSKTLKPTKTDEVIKSTSSEPSSDKRSDEEDEVEEEKA
VTPVKPLNRRGRADRVTVKEEEDEEEEEDDNDEDDDEPEEEEVSSSGEREVKGKEIKKEI
KKEKKEDTWDIKEKEPKERKETKPLETIHKQEESSEKQNDVKTEVRERTKKAPDGPVHIT
ASGENVPISEESEELDQRTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKI
GDHITECLKEYSNPDLIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQENAQAMEQN
TRGLNTHGYKHADIERLKDNSHQDESSRDSCSSDRHQPSGRYHESSSSKERHSSESHRKT
SGGGGGGGESRKRPYSSFSNGKDHRDRDHYRPDSRDRPDSRDRDRDRQDRYYNDSKHRKL
EEFRSSRDHRPDMKDHSHSDHRSSYRYHSDWQNEQRASASGPRSPRDQRSPYDSRSPLGH
RSPFDYSSDHKSTPEQIWSSRKT
NT seq
5472 nt
NT seq
+upstream
nt +downstream
nt
atggctggacgcagtgaggatgaaagtgtaagcaacagcagcggagaatcaagtaattct
gatgatgaatccggttctggatcgggctcagcatcagggtccggctcaggctccagttcc
agctcctccagcagcagcagccaatcagggagcagtgactcaggtagtggctcagactcc
ggcagccagtcagactctgacaacgagaaatccaaggagaagatggaaccgccaaataag
tcaaacattgacggagctgagttctggaagtccaacccaagtatcctcgcagtgcaaaga
tctgctatgctcaggaaacagcagcttcagcagcagcagcagcagcagcagcagcagcag
cagagacaaagctcctccaacagtggatcagatgaggactcgtcgagtagcgatgattct
gactcatcgagtggatccaaaaggagacgaaattcaggatcctctgactctggatcgggt
tctggatccgggagcggttctggatcagactcatcagcagaggaaaacagtgacgaaaca
gcgtcagactatgagcccagtcacaaaatcaaaagcaaaaagcctccaaccaagatgaat
tttcgaaatgggaagaaaagcagcaaccagaagaagaaaacccaaaagtgttcgtcctct
gacgacgaggatgggaactacaagaaggtggcagccgcgggtccacggcggcaggccacg
gtcaacatcagctacaaagaggacgaggagctgaagaccgactcagatgacctggtggaa
gttttgggcgaagacgtaccgcagcctgaggaagacgagtttgaaacactggagagagtg
atggacagcaggataggacggaaaagagcaacaggaagtgtaaccactgtatacgctgta
gaagcagacggggacccaaacaccaacttcaattccaacaaagaggccggtgatatccag
tatttgatcaagtggaagaactgggctcatatccacaacacctgggagacagaggagacg
ctcaagttacagaacgtcaagggcatgaagaaactggacaatttcaagaagaaggaccag
gagaagaagaaatggttaaaggcagcttcaccggaagatatcgagtattttaattgtcaa
gaggaactgatggatgatctgcactctcagtaccagctcgtagaacgaatcatagggcat
tcaaaccagaagtcagcggcaggttacccagactacctgtgtaagtggcagggtttaccg
tactccgagtgcagctgggaggacggcgctctgatttccaagaagttccagaaatgcatc
gacgactacatgagcagaaaccagtcgaagaccattccattcagagactgcaaggtgctg
aaacagaggccgaggtttgtgcccatgaagaagcagccgacgtacatcggaggagacggg
ctggagctccgagactaccagctggacagtttgaactggatggcccactcctggtgcaaa
ggcaacagttgcatcctcgctgatgagatgggtttagggaagaccatccagaccatcagc
ttcctcaactacatgttcaacgatcaccagctgtacgggcccttcctgctggtcgtgcct
ctctccacgctcacctcctggcagagagaaatccagctgtgggcccctcagatgaacgtc
gtggtctatctgggagacatcagcagcaggaacatgatcaggacacatgagtggatgcat
gtccacaacaagagactgaaattcaacatcctcctcacaacatacgagattcttctcaag
gacaagtcgtttctgggtaacgtgaactgggcgttcatcggtgtggatgaggcgcaccga
ctgaagaatgacgactccctcctctacaagaccatgatcgacttcaagtccaatcacagg
ctcctgatcacaggaacgcctctgcagaactccctgaaggagctctggtccctgctgcac
ttcatcatgcctgagaagtttcactcttgggagatgttcgaggaggagcacggtaaaggc
agagactcgggctacacgagtctgcacaaagagctcgagcctttcctgctgcgtcgagtc
aagaaagacgtggagaaatcacttcctgccaaagtggagcagatcctccgagtggagatg
agtgctatccagaaacagtattacaaatggatcctgaccaggaactacaaggctctgagt
aaaggtaccaaaggcagcacgtcgggtttcctgaacatcatgatggagctaaagaagtgt
tgtaaccactgttacctgatcaaacctccagaggacaacgagttcttcaacagagccgaa
gccttacagcaactgatccgcagcagcgggaagctggttctgttggacaaactgttggtg
cgtctgaaggagcgagggcacagagtcctcatcttctcccagatggttcggatgctggat
atcctggctgaatacctgaagagccggcagttcctctttcagagattagacggctccatc
aaaggggagatgaggaagcaggcgttggatcattttaacgctgagggctcagaggacttc
tgcttcctgttatcaacacgtgcgggcggtctgggtatcaatctggcctcggctgacacc
gtcgtcatctttgactccgactggaaccctcagaacgatctgcaggctcaggccagagcg
cacaggatcggacagaagagacaggtgaacatctaccgtctggtgacgaggggctccgta
gaggaggagatcatcgagagggcgaagaagaaaatggtcctggaccacctggttattcag
aggatggacaccacggggaagacggtcctccacacgggtgctgccccctccagttcagcg
ccgttcaacaaagaggagctgtctgccatcctgaagtttggtgccgaggagctttttaaa
gagctggagggggaggagcaggagcctcaggaaatggacatcgacgagatcctcaaaaga
gcggagacgagagaaaacgaccccgggccatccacagtgggagaagagctcctgtctcag
tttaaggtggccaacttctccatgatggaggaagaggagatagacatcgactctgagcgc
agtcagaggagctgggacgacatcattcctgaggagcagcggaggaggatggaggaggag
gagaggcagaaggagctggaggaaatctacatgctgccgcgcatgaggaactgtgccaaa
cagataagctttaacaccagcgggggtcgacagagcaggaacaggaggtactccggctcc
gacagcgactcgccgtcagaccgaaagaggccaaagaaacgaggacgtccacgaaccatt
ccacgagaaaatatcaagggcttcagtgatgctgagatccgaaggtttgtcaagagttac
aaaaagtttggaggaccactggaaaggttggacgctatcgctcgggatgctgaactggtg
gataaatccgaacatgacctcaaacgtctggcagagacggttcataacggctgcgtaagg
acactacgagaaaacccctgtggaccagagaagaactcaggaggcagacgagggaaggta
aaaggtcccacattcagaatctctggagtccaggtgaacgccaagctcgtcatctcccac
gaggaagagctggctccgctgcacaaggccattcctgcggaccccgaggagaggaagaag
tatatgattccatgccactcgaaggcagcacactttgacatcgactgggggaaggaggac
gactccagcctcctcataggaatctatgagtacggttacggcagctgggagatgatcaag
atggatccggacctcaatctcacacacaagctcctaccagacgaccccgacaagaagcct
caggccaaacagctgcagacccgagcggactacctcatcaagctgctgagcaaagacctg
gccaagagggaagcacagaaacaagcggggacggcaaattcacggaagaggaaaccaaga
agtaaaaagagcaaaactctgaagccgacaaagacagacgaggtgataaagagcacgtcc
tcagaaccctcatcggacaagaggtcggacgaagaggatgaagtcgaggaggaaaaggcc
gtgacaccagtgaagccgctgaacaggcggggccgagctgacagggtgactgtgaaggag
gaggaggacgaggaggaggaggaagacgacaacgatgaggacgatgacgagccggaggag
gaggaagtttcttcgtcgggggagcgggaggtcaagggaaaagagatcaaaaaagaaatc
aaaaaggagaagaaggaggacacttgggacattaaggagaaggagccaaaggagaggaaa
gaaacgaagcctctggagacgattcacaaacaagaggagagctcggagaagcagaatgac
gtgaagacggaggtacgagaacggacgaagaaagcgcctgacgggccggttcacatcacg
gcgagcggagagaacgtgcccatctctgaggagtctgaggagctggaccagaggaccttc
agcgtgtgtaaggagcgcatgcggccggtgaaagcggctctgaagcagctggacaggccg
gagaaaggactgtcggagcgcgagcagctggaacacacgagacagtgcctcataaagatc
ggagaccacatcaccgagtgtctgaaggagtactcaaaccccgacctgatcaaacagtgg
aggaaaaacctgtggatatttgtctctaagttcaccgagttcgacgccagaaaacttcac
aaactgtacaaacatgcaatcaagaagagacaggagaacgcccaggcgatggagcagaac
actagaggtctgaacacacacggctacaaacacgcagacatcgagaggctgaaggacaac
tctcaccaggacgagagcagcagagacagctgcagctcggacagacatcagccgtcaggg
cggtaccacgagagcagcagcagcaaggagagacactcctccgagtcccacaggaagacg
tccggaggaggaggaggaggaggagagtccaggaagagaccgtactcctccttcagcaac
ggaaaagaccaccgagacagagaccactacagaccggacagcagggacagaccggacagc
agggaccgggacagagacagacaggacagatactacaacgacagtaagcacaggaagctg
gaggagttccgctccagcagagaccaccggccggacatgaaggatcattcccactcagac
caccgctcctcctaccgctaccactcggactggcagaacgagcagcgagcctcggccagc
gggccgcgctccccccgagaccagcgctccccctacgactcccgctccccgctgggtcac
cgctcgcccttcgactactcgtcggaccacaagagcacaccggagcagatctggagcagc
cgcaagacataa
DBGET
integrated database retrieval system
