Semicossyphus pulcher (California sheephead): 138605421
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Entry
138605421 CDS
T10596
Symbol
pdzrn3b
Name
(RefSeq) E3 ubiquitin-protein ligase PDZRN3-B isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
Enzymes [BR:
spul01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138605421 (pdzrn3b)
Ubiquitin system [BR:
spul04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
138605421 (pdzrn3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138605421
NCBI-ProteinID:
XP_069533765
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All DBs
Position
Unknown
AA seq
1040 aa
AA seq
DB search
MGFELDRFKGTVDPDFKCNLCNKVLEDPLTTPCGHVFCSGCVLPWVVQQSSCPVKCQRIS
AKELNHVLPLKNLILKLEIKCDNHARGCDVVVKLQHLAKHAEMCDYSPVKCRNKGCSEVL
NLRDIDDHMRESCDLRPAGICESGCGLMLVHKEQRLNNHCCLRALKAHNSALQCKIICLD
REFKKQTIKANKREKSLLAQLSAVHSELQMTALKYQKKFTEYSERIDSLTKTVAFSCKED
DTKSLTVVLLRESGSLGFNIIGGRPSADDNDSTSNEGIFVSKIVAEGPADKEGGLQIHDR
IIEVNGKDLFKSTHDQAVEAFCTAKEPIMVQVLRRALHPKLVSQAAESQLSDVSTQTDIT
LRHIMALTKLPSSSPPMTELDEYLLPEEHPSRHAYFDPNDFLEGIHQDIEREELEYEEVD
LYRANIQDKLGLTICYRTDDEDEAGIYISEIDPNSIAAQDGRIREGDKIIQINGVEIQNR
EDAVALLTSEGNPNISLLVARPEIQLDMGWIDDERNDFLDDLHMDMLEQQHRQAMQFTAS
MLQQKKQEDDGGTTDTATLLSIHHEKDSGLGRTDESTRNDESSEQENLGDDQTTASNTLG
SYGKLTYSQDTLSSTDLPFSSESFISAECTDTDFLGITADECERFRELLELKCQMGNTEV
PYYQAGEAGGQEGVDKELELLNEELRTIELECLNIVRAHKMQLLREQCRESWMLHNSGFR
NYNTSIDARRHELSDITELPEKSDKDSSSAYNTGESCRSTPLTLELSPDNSLHRGAGNQG
PAGASVSTSSNVRMLKPLLSPVQEAFSLSQSRDSSKDSDGALQAESKERKHGETSKSRQN
LSRPHSPYKHAHIPAHAQHYQSYMQLIQQKSAVEYAHSQMSLVSMCRDPIIPSDLEPKME
WKVKIRSDGTRYITKRPVRDKLLRERALRIHEERSGMTTDDDAISELKMGRYWSREERKQ
HAVRAKEQKQRREFMKQSRADCLEDKKEPNIIQLSHKKLMKKRNKKIFDNWMTIQELLTH
GTKSPDGKRAYNSLLSVTTV
NT seq
3123 nt
NT seq
+upstream
nt +downstream
nt
atgggattcgagctggaccgctttaaggggaccgtggacccggatttcaaatgcaacttg
tgtaataaagttctggaggacccgctgacgactccgtgcggtcacgtcttctgctccggc
tgcgtgctgccctgggtcgtccagcagagcagctgccccgttaaatgtcagcgtatctcc
gccaaagagctgaaccacgtcctgcctctaaaaaatctcatcctgaagctggagatcaaa
tgtgacaaccatgcgaggggctgcgatgtggtggtgaagctgcagcatctggctaagcac
gccgagatgtgcgactactccccggtgaagtgcaggaataaaggatgcagcgaggttctc
aacctaagggacatagatgatcatatgcgggagtcgtgcgacctcagaccagcggggata
tgcgagagcggctgcggattgatgctcgtccataaagagcagagattaaacaatcactgc
tgcctaagagcactgaaggcgcacaatagcgcgttgcagtgcaaaattatctgcctggat
agagagttcaagaaacagactattaaagcaaacaaaagagagaagtctcttctagcacaa
ctttccgctgtgcacagtgaactccagatgacagctctgaaatatcaaaagaaattcacc
gagtacagtgagaggatcgattccctcaccaagacagtggctttctcttgcaaggaagat
gacactaaaagcttgacggttgtccttctacgtgagagcggatctctgggttttaacatc
ataggaggaaggccaagtgcggatgacaatgacagcacttcaaatgaagggatctttgta
tccaagatcgtggcggaaggtccagcagacaaggaagggggccttcaaatacacgacaga
atcatagaggtcaatggcaaggatctcttcaagtccacccacgatcaggcagtcgaagcc
ttctgcactgccaaggagcccatcatggtccaggttctgcgccgagccctgcatcccaaa
ctggtcagccaggctgctgaatcccagctctcagatgtcagtacccagactgacatcacc
cttagacacatcatggctcttacaaagctcccttcctcttcacccccaatgacggagctg
gacgagtatctgcttccggaagaacatccttccagacatgcatactttgaccccaatgac
ttcctggagggcatacaccaggacatagagcgagaggaactggaatatgaggaagtagat
ttgtaccgagcaaatatccaggacaagcttgggttgacgatctgttacaggactgatgac
gaggacgaagctgggatctacattagtgaaatcgatcctaatagcattgctgcacaggat
ggcagaattagagaaggggacaaaatcattcagatcaatggtgttgaaatccagaaccgg
gaggatgctgtggcgctgctaactagtgaggggaacccgaatatctctctgctggtggcc
aggccagagatccagctggacatgggctggatagatgacgaaagaaacgactttctggat
gacctccacatggatatgctggagcagcagcaccgtcaggccatgcagttcactgccagc
atgttgcagcagaagaagcaggaagacgacggaggcactacagacacggccactcttctg
tcgattcaccatgagaaggatagtggtcttggtcgtacagatgaaagtacgcgaaacgat
gagagctcagagcaggagaaccttggtgatgaccagacaacagcgtccaacacgctgggc
agctacggaaagctgacctacagccaggacaccctcagcagcactgaccttcccttcagc
agtgagtcattcatctctgcggaatgcactgacactgactttctgggaatcactgctgat
gagtgtgagcgtttcagagaactcctggaactgaagtgccagatggggaacactgaagtt
ccatactaccaggctggtgaggcaggtggtcaggagggtgtggacaaagagctagagctg
cttaatgaggagctgcgcactattgagctggagtgcctgaatattgttcgtgctcacaaa
atgcagctgctcagagagcagtgccgtgagtcctggatgctccacaacagtggcttccgc
aactacaatacaagcattgacgcacgccgacatgagctctcagacattacagagctgcca
gagaaatcagacaaagacagctccagtgcctacaacactggtgagagctgtcgcagcaca
cctctcacgttggagctgtctcctgacaactcactccaccgaggagcagggaatcagggt
ccagctggggcatctgtctccaccagctccaacgtcaggatgcttaaacctctcctgtcc
cctgtgcaggaagcatttagcctcagtcagagcagagactcctccaaggattcagatgga
gccctgcaggcagagagtaaggaaaggaaacatggggagaccagtaagtcgaggcaaaac
ttgtctcggccacattcaccgtacaagcacgcccacatccctgcacatgcccagcactac
cagagctacatgcagctgattcagcagaaatcagccgttgagtatgcccatagccagatg
agtctggtcagcatgtgccgggaccccatcatcccgagtgatctggagcctaaaatggaa
tggaaggttaagatacgtagtgatggcacacgctacatcacgaagcggcctgtccgagac
aagcttctgcgggagcgtgcactgcgcattcacgaggagcgcagtggtatgaccacagac
gacgatgccataagtgagcttaagatgggccgctactggagcagggaggagaggaagcag
catgcagttcgtgccaaagagcagaagcaacgccgagagttcatgaagcagagccgagca
gattgtctggaggacaaaaaggagcccaacatcatccaactcagccacaaaaagttgatg
aaaaagagaaataagaaaatatttgacaactggatgactatacaggaactgctgacccat
ggtacaaagtcaccagatggcaaaagagcttacaactcactcctatctgtgaccacagtt
taa
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integrated database retrieval system
