Semicossyphus pulcher (California sheephead): 138605422
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Entry
138605422 CDS
T10596
Symbol
tubb1
Name
(RefSeq) tubulin beta-1 chain
KO
K07375
tubulin beta
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04145
Phagosome
spul04540
Gap junction
spul04814
Motor proteins
spul05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
138605422 (tubb1)
09144 Cellular community - eukaryotes
04540 Gap junction
138605422 (tubb1)
09142 Cell motility
04814 Motor proteins
138605422 (tubb1)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
138605422 (tubb1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spul03036
]
138605422 (tubb1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
spul04812
]
138605422 (tubb1)
04147 Exosome [BR:
spul04147
]
138605422 (tubb1)
Chromosome and associated proteins [BR:
spul03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
138605422 (tubb1)
Cytoskeleton proteins [BR:
spul04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
138605422 (tubb1)
Exosome [BR:
spul04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
138605422 (tubb1)
Exosomal proteins of colorectal cancer cells
138605422 (tubb1)
Exosomal proteins of bladder cancer cells
138605422 (tubb1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_2
Tubulin_3
Vein_beta-barrel
Motif
Other DBs
NCBI-GeneID:
138605422
NCBI-ProteinID:
XP_069533770
LinkDB
All DBs
Position
Unknown
AA seq
472 aa
AA seq
DB search
MREIVHLQIGQCGNQIGSKFWEVISEEHGLNATGNYEGDSNLQLERVNVYFSEAHGGKYV
PRALLVDLEPGTMDSVRGSRIGALFRPDNFIHGNSGAGNNWAKGHYTEGAELVEQVVDRV
RNESESCDCLQGFQLVHSLGGGTGSGMGTLLINKIREEYPDRIMNTFSIMPSPKVSDTVV
EPYNATLSVHQLLENTDETFCIDNEALYDICFRTLKLTTPTYGDLNHLVSMTMSGVTTSL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTPRGSKQYRALTVPELTQQMFDARNMM
TACDPRRGRYLTVAGIFRGRMSTKEVDEQMLAIQQKNTNHFVEWIPHNVKVAVCDIPPTG
LKMSSTFIGNNTAIQEIFRRVGEQFSLMFRRKAFLHWYIGEGMDEMEFTEAESNLNDLVS
EYQQYQDATVEQDSEAEDEEEEGPSSKVTTNVESRVEVKLETVTETSKETVD
NT seq
1419 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaaattgtacatctgcaaattggacaatgtggcaaccagatcggctcaaagttt
tgggaggtgatcagtgaagaacatgggctcaatgcaacaggaaactatgagggtgacagc
aacctccaactggagcgggtcaacgtctacttcagtgaggcacatggtgggaaatatgtc
cccagggccctgctcgttgacttggagcctggtacgatggacagtgtgagaggaagtcgc
atcggggctcttttcaggcctgacaacttcatccacgggaactcaggagctggcaataac
tgggcgaagggccactacacagagggagcagagctggtggagcaggttgtagaccgggtg
aggaatgagagtgaaagctgcgattgcctgcagggcttccagctggttcactccttagga
ggtgggaccggctctggcatgggaactctcctcatcaacaagatccgagaggagtacccc
gaccgcatcatgaacaccttcagcatcatgccctcccctaaagtctccgacactgtggtg
gagccgtacaacgccaccctgtcagtccaccagctgctggagaacacagacgagaccttc
tgcatcgacaacgaggccctctacgacatctgttttcgcacgcttaaactgaccacaccg
acttacggggacctcaaccacttggtctccatgaccatgagcggggtcacaacctctttg
agatttccaggacagctcaacgcagacctgaggaagctggctgtgaacatggtacctttc
cctcgcctccacttcttcatgccaggctttgcccccctgacgcccagaggaagcaagcag
tacagagccctcacagtgcctgagctcacccagcagatgtttgacgcccgcaacatgatg
acggcttgcgaccccaggcgaggccgctacctcactgtcgctggcatcttccgtggccgg
atgtccaccaaagaggtagacgaacagatgctcgcaatccagcagaaaaacaccaaccac
tttgttgaatggatcccccataacgtcaaagttgccgtgtgtgacatcccacccacaggc
ctcaaaatgtcatccaccttcatcggcaacaacacagccattcaggagatattccgccgt
gtgggcgagcagttctcgttgatgttcaggcggaaagcttttctccactggtacattggg
gagggcatggatgaaatggaattcactgaggctgagagcaacctcaacgacctggtgtca
gagtaccagcagtaccaagacgccactgttgaacaagattcggaagcagaggatgaagaa
gaggagggaccttcatcaaaagtgacaacaaatgttgagtctcgggtggaagttaaactg
gagacagtgactgaaacaagcaaagaaactgtagattaa
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