Semicossyphus pulcher (California sheephead): 138605809
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Entry
138605809 CDS
T10596
Symbol
nfasca
Name
(RefSeq) neurofascin homolog (chicken) a
KO
K06757
neurofascin
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
138605809 (nfasca)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
spul04515
]
138605809 (nfasca)
Cell adhesion molecules [BR:
spul04515
]
Immunoglobulin superfamily
L1 family
138605809 (nfasca)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
I-set
Ig_3
ig
fn3
Ig_2
Bravo_FIGEY
V-set
Ig_DSCAM-DSCAML_C
C2-set_2
Ig_VEGFR-1-like_5th
BiPBP_C
DUF3792
Motif
Other DBs
NCBI-GeneID:
138605809
NCBI-ProteinID:
XP_069534350
LinkDB
All DBs
Position
Unknown
AA seq
1368 aa
AA seq
DB search
MLGQGGHTALALVSLLLLLWREAAPIEVPQDPKILKDLKQPPTIIKQSAKDYIVDPRDNI
IIECEAKGNPVPTFSWRRNGKFFNIGKDPRVTMRKRSGTLEIGFRSGGRPEDYEGEYQCF
ASNDFGVALSNNILLRVSKAPLWPKEVLEPVVVPEGSSLILPCNPPPGLPPPYTFWMNSA
MIPIPQDKRVSMGLNGDLYFSNVLAKDAHTDYSCNARFLFTHTIQQKNPFTLKVQTSRKV
AESTPTFLSPLGTESSKMVLRDEQLLLECIAAGLPTPTVKWFKKGGDLPAQKVKFEKFNK
TLKIINVSEEDAGEYVCMAYNQLGSARHSIFVQVKAAPYWLDKPTNLVLAPDENGRLVCR
ANGNPKPNIQWLINGQPIDSFPTNPSTQVEGDTIIFRSVQMGSSAVYQCNASNQHGYLLA
NALVSVLDMPPRMLGPKNQLIRVIENNRTFLDCPFFGSPLPDLRWFKNGQGSGLDGGQYR
VYINGTLEIKRARAEDEGTYTCVASSILGTANNQVRLEVKEATRIVPAPKHQTAIRGTTA
RFDCKVMSDPSLSVTVTWMKDDKPLSLGWRLKKDDETLTIPNVNEGDEGLYTCTVKSDID
EDSYSARLTVLEEASLNPSVSSALPPDRPDPPMDLDLSDPAARSVRLTWIPGNDHRSPIS
QFLVQFEEDRWDPGRWQNLSSYPGDLNSVILQLSPFVNYQFRVIAINSVGQSEPSRPSPR
YKTSGAAPDAIPRGLRGWGSKKDNMEITWEPLLDLERNGPNLHYSVWWRRKDQGEGWTNV
TTVESKYVVQNTKTYVPYEIKIQSRNEFGSGPESNMVVGYSGEDKPTDAPTDLRVSKVDS
TKANIHWKSVDLNSILGEFKEYRLYYWRESSRVPGLVVSKEKKTKGFYSTAAEPSGILSD
LVPYSQYKMFMVAANSRFEGPPSNTVEFTTKEGVPDAPKFFRINRRSFDTIHLQWDKPLE
PNGILIGYQLRYQTVNGSRVGRPQLETFLPNVSDFTLRLPDRSTRYKFYLSALTQVGAGE
VFAEESPHFANEENFTDTTGLVELTDASLASEFTPTPPPPAPHPPTTIAPTTISTSTSTT
TTSTTTTPSTTTTTTTEATTTTTPPVPVTTKRTDQTVLATPGRDIWNLTVESNSNYANVS
WRHNFPAGSSEFVLEFTLDSDKSVKVVPGQQPPVTVADLIAGAKYHLRVYSHELNSVSSK
SVTFKTKPAYKDPVDIATQGWFIGLMCAIALIILILLIVCFIKRSRGGKYPGCRCVTGFA
KYLVRDKKDLPLDPVDQKDQDGSFDYQNENENSSDEDNKPLQGSQTSLDGNVKESDDSLV
DYGEGGDGQFNEDGSFIGQYTVKKDKDETEGNESSEATSPVNAIYSLA
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atgttggggcagggcgggcatacggccctggctctcgtgtcattactgctgctactgtgg
cgcgaagcagcaccgatcgaagtcccacaagatccaaagatcctgaaagacctgaagcag
ccccccactataatcaaacagtcagcaaaggactacattgttgatcccagagacaacatc
atcatcgagtgtgaggccaagggcaacccagtgccaacgttctcatggcgaaggaacggg
aagtttttcaacatcgggaaagatcccagggtgacgatgcgaaaacgctcgggaactctg
gagatcggtttccgtagcggaggacgaccggaggactacgagggagagtaccagtgtttc
gcctccaatgactttggagttgctctgtccaacaacatcctgctccgggtctcaaaggct
cctctgtggcctaaagaggtgctggaaccagtggtggtacctgaaggctcctcgctgatt
ctaccctgcaaccccccaccaggcttgcctcctccctataccttctggatgaacagcgct
atgattcccatccctcaggataagagagtgtccatgggtctgaacggggacctctacttc
tccaacgttttggccaaagatgctcacactgactacagctgcaacgctcgcttcctcttc
acacacaccatccagcagaagaaccccttcacactcaaagtccagaccagccgcaaagta
gccgagtccacgccgaccttcctttcacctttggggacggagagctccaaaatggtgcta
cgagacgagcaactgctgctggagtgcatcgctgctggactaccaacacccactgttaag
tggtttaagaagggcggggacctgccagcacagaaagtgaagtttgagaagttcaacaag
accctgaagataatcaacgtgtctgaggaggacgctggggagtacgtctgcatggcctac
aatcaattaggcagcgcacgccactccatctttgttcaggtcaaagcggctccttattgg
ctggacaaacccacaaacctggtgctggcaccggatgagaatggacgcctggtgtgtcgg
gcaaacggcaaccccaaacccaacatccagtggctgatcaacggccagcctatagacagc
tttcctaccaacccgagcacacaggtggagggcgacacaatcatctttcgctcggtgcag
atgggaagcagtgcggtctaccagtgcaacgcttccaaccagcacggctatctgctggcc
aacgcattggtcagcgtcctcgacatgcctccgaggatgctgggcccaaaaaaccaactg
attcgggtcatcgagaacaaccgcaccttcctggactgtcccttctttggctcccctctg
ccggacctacgctggtttaagaacggacagggcagcgggctggatggaggtcagtatcgt
gtttacatcaacggcaccctggagatcaaacgggcccgagcagaggacgaaggaacctac
acctgtgtggccagcagcatcctgggcacagccaataaccaggtccgcctggaggtcaaa
gaagcgactcgtatcgttccggccccgaagcaccagacagccatccggggcaccacggct
cgctttgactgtaaggtgatgtccgaccccagcctgtccgtcaccgtgacctggatgaag
gacgacaagcctctctcactgggatggaggttgaagaaagacgacgagacgctgaccatc
cctaatgtgaacgagggcgatgagggactgtacacctgcactgtaaaatcagatatagac
gaggactcatactcagcccgcctcactgtgttagaggaagcctccctcaacccctcagtc
tctagtgccttgcctccagaccgccctgaccctcccatggatctggatctatcagatcca
gcagcacgcagcgttcgcctcacctggatccccggaaacgaccacaggagcccaatcagc
cagttcctggtccagtttgaggaggaccgctgggacccgggcaggtggcagaacttgtcc
tcttaccccggagacctcaactcagtcatcctgcagctctcccccttcgtcaattaccag
ttcagggtcattgccatcaactctgtgggccagagcgagcccagccgcccctcgcctcgg
tacaagaccagcggagcggccccagatgccattcccagaggcctccgagggtggggctcc
aagaaggacaacatggagatcacttgggagcctctgcttgatctggagagaaacggtcca
aacctgcactacagcgtgtggtggaggcggaaggatcagggggaggggtggactaacgtg
accacggtggagtccaaatatgtcgtccagaacacaaaaacctacgtgccttatgagatc
aaaatccagagcaggaatgagttcggatcaggacccgagtccaatatggtcgtcggatac
tctggagaggacaagcccactgatgctcccacagacctgcgcgtttcaaaggtcgacagc
accaaggcgaacatccactggaagtctgtggacctgaactccatcctgggggagttcaag
gagtacagactgtactactggcgtgagtccagtcgggtccctggtctggtggtcagtaag
gagaagaagaccaaaggtttctacagcactgcggccgagccgtccggcatcctcagcgac
ctggtgccctactctcagtacaagatgttcatggttgcggccaacagccgttttgagggt
ccgcccagcaacacggtggagttcaccaccaaggagggagtgccggacgctcccaagttc
ttccggataaaccgcagaagtttcgacaccatccacctccaatgggacaaacctctggag
ccaaacggcattctgattggataccagctcaggtaccaaacagtcaatggctccagggtg
ggtcgtccccagttggagacgttccttcctaacgtgtcagacttcacgcttcgcctgccg
gacagatccacccgctacaagttctacctgtcggcgctcacgcaggtgggagcaggggag
gtctttgcagaggagtcgccacacttcgccaatgaagaaaactttactgacactacaggg
ctagtcgagcttacagacgcctccttggcttcagagttcactcctactcctcctcctccc
gctccacatcctcctaccaccatcgctcctacaaccattagtacctcgacttctacaacc
acgacttcgactacaactactccttctaccaccaccaccactacgaccgaggcgaccact
accaccactcctcccgtgccggtcaccaccaagcgtactgatcagaccgtgttggcgacc
cctgggcgggacatctggaatctgacggtggagtctaacagtaactacgctaacgtcagc
tggagacacaacttcccggccggcagcagcgagtttgtgctagagttcacactggacagc
gacaagtccgtgaaagttgtaccgggacagcagcctcccgttacagtggcggatctgatc
gcaggcgccaagtaccatctgagggtttactcccatgagctcaacagcgtcagcagcaaa
tctgtcacctttaagaccaaaccagcctataaagacccggtcgacatagccacccaaggc
tggttcattggcttgatgtgcgctattgccctcatcattctgatcctcctcatcgtctgc
ttcatcaagaggagtcgcggaggcaaatacccaggttgcagatgcgtaactggtttcgca
aaatatctagtccgtgacaaaaaagatctccccttggatccagtagatcagaaagaccaa
gatggatcctttgattaccagaacgaaaacgagaacagcagtgacgaggacaacaagccc
ctgcagggcagccagacgtcgctggacggcaacgtgaaggagagcgatgacagcctggtg
gactacggggagggcggcgacggccagttcaacgaggacggctctttcatcggccagtac
acggtgaagaaggacaaggatgagacggagggcaacgagagctccgaggccacctcgccc
gtcaacgccatctactcgctggcgtag
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integrated database retrieval system
