Semicossyphus pulcher (California sheephead): 138605876
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Entry
138605876 CDS
T10596
Name
(RefSeq) C-myc promoter-binding protein-like
KO
K20163
DENN domain-containing protein 4
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spul04131
]
138605876
Membrane trafficking [BR:
spul04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
138605876
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DENN
dDENN
uDENN
PPR_2
PPR_3
DUF2464
PPR_long
PPR
Motif
Other DBs
NCBI-GeneID:
138605876
NCBI-ProteinID:
XP_069534466
LinkDB
All DBs
Position
Unknown
AA seq
1973 aa
AA seq
DB search
MMEDKGPRVADYFVVAGLTDSSKPLDQEIHFDDVCHKTAKPKAPITDVTVVIRSMGEEVP
PGFTCIEETPTGHSADLNNGGLMAPQIFVCYRRGRDKPPLIDLGVLYEWKERLKQGCHLI
QTTHSGRPANISGNSSQRIYVTYRRAPESQPHTALAVTDICIIIPSKGETPPHTFCKVEK
NLNSSMWGSSVYLCYKKSVAKTNTIAYKAGLFSRYPEEDYESFPLPESVPLFCLPMGATI
ECWPANTKYSLPVFSTFVLTGASGEKVYGAAIQFYEPYPQECLTDQQSSQLGLLNPEPPK
PSSPKNTKTADISTPNSTTNSPATPRLVYTNKCICLLSHWPFFDAFRKFLTFLYRYSISG
PHALPIEKHISHFMHKVPFPSSQRPRILVQLSPHDSLMLSQPVSSPLPLSGGRFSTLLQN
LGPENAVTLLVFAVTEHKILVHSLRPAVLTSVTEALVSMIFPFHWPCPYIPLCPLALADV
LSAPCPFIVGVDSRYFDLYDPPPDVSCVDLDTNTIFHNEDKRALTWKILPKKACKNLMNV
LSNLYQQLVDGQYRPDGLLELSMSDTSELSCGKSLHTLELEIQEAFLRFMAAILKGYRSF
LRPITQAPSEKATDASSLFDLQGFLKSRDRSHQKFYSLMTKTQMFIRFIEECSFVSDKDA
SLAFFDDCVDKLYNSERGADKGSKVDSDRPEEARLIEIDESQRSEHTVFITPPELPPLPE
GEEYPLCYRYDGFPVLSLDLFDPVEGLRTPSSRLAARQSCPTSPAPMFRRTKQEIKSAQK
IAKKYSSIPQLWSKCLLRHCYGLWFICLPAYVKVCHSKVRALRTAYDVLRKMQAKKLQPP
DEVCYRVLMQLCGQYGQPVLAVRVLFEMKKAGVHPNAITYGYYNKAVLESTWPSSTRGGY
FLWMKLRNVVLGVAQFKQALRRHAPTQSPLSDGSDLDAVSHGSLDSSADTNLAEQGPDSA
KVYPTDDRSSTGDQSDLGYNSLSKEEVRRGDPSAPDSAPDKDDKKESDCSSLSETESSKG
SKDCLPQLEVEAQSSFKPRGIVRSSCAFDDSSCKPKSSASAGHVAGLLFTSSLDEIGEVN
SNSLLRRHKSALEEVVGSSVGSSGSGTTVLGLGMSQGETDPDKIAGHLGADVKILSGANF
SKKMRPRSLVLVELEEDAPKQGFSRSYDHREEEEETEEADSSDEDRSNTEAIFDLEDLDL
DKPATGGGMSSKRSHKKPVGRSASYGGMSTEASRGAAKRTDIETGYDPLSLLAAETQSKQ
QNEDQYPEGDEASTPSARRHLAREIELYMNHMGSPLSSRTPSLDLQDPASPLLLHPSSIS
APRRASLPHSSPLRTAGVPRSCTFHPPSPSETISRQRLWSSPPRRSSSTTPSPSPRPSPY
RERTDRMSLASPSPSSSSFALDTLLTPTLDVFKTSMVSAGKGVAEKASRWYSRLATYTTP
TKDGLSDRLSVSSLGVGDPDCSSMLDEEDCRESGSSVVSPQRNGPVGPRKSPRRSPFRSR
LDSPTAGSSLGRPTSLLPGCVLTPPGFPLPDKSDLGSSRYTSNTSIFNNYAMELLISSCS
RCKTCDCLVYDEEIMAGWTADDSNLNTTCPFCGNPFLPFLNVEIRDMRGPGRLFLKGSPS
VDEAMTSSYSASTGLDTGTSTLSTPCPTTAVSPPSPVIAAPECSGTGRTRSARAQGINIP
TDRREGALSPGGPMARSVSAFGPLEETSRPRRCVPTSGSLPSRLNETPDPLSMEWRLHNP
EPVTVPYLSPLVLWKELESLLENEGDPVITEADMVDHHPIIYWNLVWYFRRLDLPSNLPG
LILTSEHCNRDSQVPRHWMSEDSKHVLIQILWDNLKLHQDQIQPLYILWNTYNVGYPLSR
PVSEEERPFSEELLQSVVSNIQRNDVSRPMAQLLQLLGQTLGVKRQRSLYRDILFLSLVA
LGKDNIDIDAFDREYKLAYDRLVPSLVKLTHNCDRPPSTGVMECRRTFGEPYL
NT seq
5922 nt
NT seq
+upstream
nt +downstream
nt
atgatggaggacaaaggccctcgtgtagccgactactttgtggtggccggtctgacggac
tcgtccaagccgttggaccaggagatccactttgatgatgtctgccacaagacggccaaa
ccaaaggcgcccatcaccgatgtgacagtggtgatccgctcgatgggcgaggaggtgcct
ccggggttcacctgcatagaggaaacaccaaccggccattcagctgatctgaacaatgga
ggcctcatggcgccacagatcttcgtgtgctacaggcgaggtcgcgacaagccgcctctc
attgacctgggcgtgctgtacgagtggaaggagcgactgaagcagggctgccacctcatc
cagaccacgcactccggacgtccggcaaacatcagcgggaattcctcccagcgaatctac
gtcacctaccgccgggcgcctgagagccagccgcacaccgccctcgctgtcaccgacatc
tgcatcatcatcccgagcaagggagagacgccgccacacaccttctgcaaggtggagaag
aacctcaacagcagcatgtggggctcctctgtctacttgtgttataagaagtctgtggcc
aaaaccaacacaatcgcctacaaagcaggtttgttcagcagatatccagaggaggactat
gagtcattccctctgccagagtctgtccctctcttctgccttcccatgggggccacaatc
gagtgctggccggctaacaccaaatactctctgcctgttttttccacctttgtcctcacc
ggagcctccggagagaaggtgtacggtgctgccattcagttctatgagccctacccgcag
gagtgtctgactgatcagcagagctcccagctgggtctcctgaacccggagccacccaaa
ccctcctcccccaaaaatacgaagacagccgacatcagcaccccaaacagcaccacaaac
agccctgctacacctcgcttagtctacaccaacaagtgcatctgtctgctctcccactgg
cccttctttgatgctttccgcaagttcctcaccttcctctatcgctactccatctccggc
cctcacgccctgcccatcgagaagcacatctctcattttatgcacaaagttcccttccct
tcctcccagaggcctcgcatcttggtgcagctttcccctcacgacagcttgatgctgagc
caaccggtgtcttctcctttaccgctcagtggtggtagattttccacgctgctccagaac
ctcggaccagagaacgctgttaccctgctggtgtttgccgtcactgaacacaagatcctg
gtccactcgttacgacccgctgtactgaccagcgtcactgaagctctggtgtctatgatt
ttcccgttccactggccgtgcccgtatattcctctgtgcccgctggcgttggctgacgtg
ctgagcgctccctgtccgttcattgtaggagtggactcccgctacttcgatctttacgac
cccccacccgacgtgagctgcgtggacctggacacaaacaccatcttccacaatgaagat
aagcgagccctcacatggaagatcctgccaaagaaagcctgtaaaaacctcatgaatgtg
ctgagcaatctctaccagcaactggttgacggtcagtaccggcccgatgggctgctggag
ctgagcatgagcgacacctcagagctgagctgtgggaagagcctccacacgctggagctg
gagatccaggaagccttcctgcgcttcatggcagccatcttgaaaggctaccgttcattc
ctgcgacccatcacccaggcaccgtctgagaaagccacagacgccagctcgctgttcgac
ttgcaagggttcttgaagagccgcgaccgctcacaccagaagttttactctctgatgacg
aaaactcagatgtttatccgcttcattgaggagtgctcctttgtgagcgacaaggacgcc
agcctggccttctttgacgactgtgtggacaagctctacaactcagagcggggtgcagac
aaaggaagcaaggtggacagtgacaggcccgaggaggccaggctgatagagattgatgaa
tcgcagcgcagcgagcacacagtcttcatcacacctccggagctgccccctctgcccgag
ggggaggaatatccactctgctacaggtacgatggtttcccagtgttgagccttgacctg
tttgaccctgtggagggcctgcgcaccccctcctcccgcctcgctgccagacagagctgt
cccaccagccctgcccccatgttcagacgcaccaagcaggagatcaaatcagcccagaag
atagccaagaagtactcgtccatcccccagctgtggtccaagtgtctgctccgtcactgc
tacggcctgtggttcatctgtctgccagcatacgtgaaggtgtgccactccaaggtgcgg
gcgctccgaaccgcctacgacgtcctcaggaagatgcaggcaaagaaactgcagccccct
gatgaggtttgctaccgggtgctgatgcagctgtgcggacagtacggccagcctgtgctg
gctgtgagggtcctgtttgagatgaagaaggccggagtccacccgaacgccatcacttac
ggctactacaacaaggcggtgttggaaagcacgtggccctccagcaccagaggcggatac
ttcctgtggatgaagctgagaaacgtcgtcctgggcgtggcgcagttcaaacaagcgctg
cgccgacacgctcccacccagagccctctgtcagatggcagcgacctggacgccgtgagt
cacggcagcctggatagctctgccgacactaacctggccgagcagggccctgactccgcc
aaagtttaccccactgatgatagatctagcacaggggatcaatcagatctgggttataac
tcgctgtccaaagaggaggttcggagaggagaccccagcgccccggactccgctcctgac
aaagatgacaagaaggagagcgactgcagctccttgtcggagacggagagcagcaaggga
agtaaggactgcctccctcagctggaggtggaggcccaatcctccttcaaacccagggga
atcgttcgcagcagttgtgcatttgacgattcgtcatgtaaacccaagagctctgccagc
gcaggccatgttgcaggccttctctttacctcctccctggatgagatcggtgaggtcaac
agcaacagtctgctcaggagacataagagcgctctggaggaggtggtgggcagctcggtc
ggcagcagcggcagcggcaccaccgtcctcggcctgggtatgagccagggtgaaaccgac
cctgataagatcgcgggacacctgggggcagacgtaaagattctctctggtgccaacttc
agtaagaaaatgaggcctcgatcgctggttttggttgagttagaggaggatgctcctaag
cagggcttctccagaagttacgatcacagggaggaggaagaggagacagaggaggcagac
tccagtgatgaggacaggagtaatacagaagccatttttgatttggaggatctggattta
gacaaacctgccacaggaggaggcatgagctctaaaagatctcataaaaagccagtggga
cgcagcgccagctatggcggcatgagcactgaggcgtcccgaggagctgctaagcgcact
gacattgagacgggctacgaccctctgtccctgctggcagcagagacgcagtccaagcag
caaaacgaggaccagtacccagagggggacgaggccagcacgccgagcgcccgaaggcac
ctggccagggagatagagctctacatgaaccacatgggcagcccgctgagcagccgtaca
cccagtctggacctacaggacccagccagccccctcctcctccacccctcctccatctct
gccccccgcagagccagcctgccccacagctcccccctcaggacagccggagtaccacgc
tcctgcaccttccaccctccttcgccctctgaaaccatctcacgccaacgtttgtggtca
tcacctccccgtcgcagctccagcaccacccccagcccgagcccccgacccagcccgtac
agggagaggacagacaggatgagcctggcctcaccttcaccctcctcctcctcgttcgct
ctggacactctgctcacaccaacgctcgatgtcttcaagaccagtatggtctctgctggg
aagggcgtggcagagaaggcaagccgctggtattcacggctcgctacgtacaccactcct
accaaggacggcctcagtgaccgcctgagtgtgtcctccctcggtgtcggagatccagac
tgctcctccatgctggatgaggaggactgtagggagtcggggagctcagtggtctctcct
cagaggaacggccccgtgggtcctcgaaagagccccagacgcagccccttccgcagccgc
ctggacagccccactgcaggatccagcctggggagacccacgtctctgctcccaggatgt
gtcctcacgcctcccggcttccctctgccagacaagtcggacctcggctcttcacgttac
accagcaacaccagcatcttcaacaactacgccatggagctgctgatctccagctgttct
cgctgcaagacgtgtgactgcctggtgtatgacgaggagatcatggccggctggacggcc
gacgactccaacctgaacaccacctgccccttctgtggaaaccccttcctgcccttcctc
aacgtggagatcagggacatgcgaggacccggcagactcttcctgaagggcagcccgtca
gtggacgaggcgatgacctcatcgtactcggcctccactggtctggacacggggacgtcc
accttgtcaaccccctgtcctacaacagccgtgtcccctccctcacctgtgattgctgcc
ccggagtgctcagggactggaaggactcgatcggccagagctcaaggtatcaacatcccc
acagaccgccgggagggggcgctgtcccccggagggcccatggcccgcagcgtcagcgcc
tttggtcctctggaggaaacatcccgacccagacgctgtgtgccgacgtcaggcagtctg
cccagccgcctcaatgaaacgcccgaccctctgagtatggagtggaggcttcacaacccc
gagccggtgacggttccctacctgagcccgctggtgctgtggaaggagctggagagtctg
ctggagaacgagggcgaccccgtgatcacggaggccgacatggtggaccatcaccccatc
atctactggaacctggtctggtacttcagacggctggacctgcccagcaacctgccaggc
ctcatcctcacctcggagcactgcaacagagactcacaggtccctcgtcactggatgtca
gaggacagcaaacacgtgttgatccagatcctgtgggacaacctgaagctgcaccaggac
cagatccagcctctctacatcctgtggaacacatacaatgtgggttaccctctgtcccgg
cccgtctccgaggaggagaggccgttcagcgaggagctgctgcagagcgttgtgagtaac
atccagaggaacgacgtcagccggccgatggctcagctgctgcagctgctgggacagacg
ctcggggtcaagaggcaaaggagtttgtaccgggacatcctcttcctctctctggtggct
ctggggaaagataacattgatattgacgcctttgaccgcgagtacaagttggcatacgac
cgcctcgtgccgagcctggtgaaactgacccataactgtgaccgtcctccgagcacaggg
gtgatggagtgccgcaggacgtttggagagccttacctgtaa
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