Semicossyphus pulcher (California sheephead): 138606328
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Entry
138606328 CDS
T10596
Symbol
shmt2
Name
(RefSeq) serine hydroxymethyltransferase, mitochondrial
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul00260
Glycine, serine and threonine metabolism
spul00630
Glyoxylate and dicarboxylate metabolism
spul00670
One carbon pool by folate
spul01100
Metabolic pathways
spul01200
Carbon metabolism
spul01230
Biosynthesis of amino acids
spul01240
Biosynthesis of cofactors
spul04981
Folate transport and metabolism
Module
spul_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
138606328 (shmt2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
138606328 (shmt2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
138606328 (shmt2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
138606328 (shmt2)
Enzymes [BR:
spul01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
138606328 (shmt2)
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Paralog
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Motif
Pfam:
SHMT
DUF5857
TFIID-18kDa
Motif
Other DBs
NCBI-GeneID:
138606328
NCBI-ProteinID:
XP_069534895
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All DBs
Position
Unknown
AA seq
501 aa
AA seq
DB search
MLSFALRQLTRPLCQRAPLRLSVRGQQSHAAPRAVDEDRPWTGQDSLAQDDPEMWDLLQK
EKDRQCRGLELIASENFCSRAALEAQGSCLNNKYSEGYPGRRYYGGAEVVDQIELLCQKR
ALEAFDLDPALWGVNVQPYSGSPANFAAYTAVLNPHDRIMGLDLPDGGHLTHGYMSDVKR
ISATSIYFESMPYKLNIATGLIDYDQMEMTAKLFRPKLIIAGTSAYARLIDYARIKKLCT
DIKAYLLADMAHISGLVAGRAIPSPFEYADLVTSTTHKSLRGARAGLIFYRKGVRSVDKK
GKEIMYDLEDRVNFSVFPSLQGGPHNHAIAGVAVALRQAQSPMFKEYISQVLKNSKAMAT
ALLSKGYTLVSGGTETHLVLVDLRPKGIDGARAERVLELVSVTANKNTCPGDKSALTPGG
LRLGAPALTSRQFKEADFVQVVEFMDEGFKIALDVKKKTVKLQDFKNFLLQDPETVARIA
ELRHRVEAFARPFPMPGFHDH
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgctgtccttcgctctgagacaactcacacggccactgtgccagcgagccccacttcgt
ctcagtgtgcgtggccagcagtcccacgccgccccccgtgcagtggatgaagatcgtcca
tggacgggccaggacagcctggctcaggacgaccccgagatgtgggacctgctgcagaag
gagaaggacaggcagtgccgcggcttggagctcattgcatcggagaatttctgcagtcga
gctgctctggaagctcagggctcctgtctgaacaacaaatactcggaaggctacccaggg
agaagatactacggtggagcagaagtggtcgaccaaatcgagttgctgtgtcagaagcga
gccctggaggcctttgacctggacccagctctgtggggcgtcaacgtccagccgtactct
ggttcccccgccaactttgccgcctacaccgctgtgctgaacccccacgaccgcatcatg
ggcctggacctgcccgacggaggacatctgacccacggctacatgtctgatgtgaagagg
atctcggcgacctcgatctattttgagtccatgccctacaagctaaatattgcaacagga
ctcatagactacgaccagatggaaatgacggccaagctgttccggcccaagctcatcatc
gctggcaccagcgcctatgcccgcctcattgactacgcccgcatcaagaagctgtgcacg
gacattaaggcctacttgctggctgacatggcccatatcagcggcctggtggcaggaaga
gccatcccctctcccttcgaatatgctgacctggtcacctctaccacacacaagtccctc
cgaggagccagggctggcctcatcttctatcgtaagggtgttcgctccgtggacaagaag
gggaaggagatcatgtacgacctggaggacagggtcaacttctccgtcttcccctccctg
cagggtggacctcataaccacgccatcgctggtgtggctgtggcactcagacaggcacag
tctcccatgttcaaggagtacatcagccaggtacttaagaactccaaggcgatggctaca
gctctcctcagcaaaggctacaccctggtgtcaggcgggaccgagacccacctggtcctg
gtggacctccggcctaagggcatcgatggggctcgtgcagagagggtgctggagctcgtg
tcagtcactgccaataagaacacctgccccggggacaagagcgccctgactcctggtggc
ctgcggctgggtgccccggccctgacctccagacagtttaaagaagccgactttgttcaa
gttgtcgagttcatggatgaaggcttcaagatcgccttggatgtcaagaagaagacagtg
aagctccaggacttcaagaacttccttcttcaggacccagagactgtggctcgcattgca
gagctgcgccaccgcgttgaagcctttgccaggcccttccccatgccaggcttccacgac
cattag
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