Semicossyphus pulcher (California sheephead): 138606401
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Entry
138606401 CDS
T10596
Symbol
chd5
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 5 isoform X1
KO
K14435
chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
Chromosome and associated proteins [BR:
spul03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
138606401 (chd5)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138606401
NCBI-ProteinID:
XP_069534968
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Position
Unknown
AA seq
2010 aa
AA seq
DB search
MPGSLSNEDEGQDDMDFEDDMPDEDDEGERERNTVPLTPLDSFFSDNDSLKQQKKKKPKK
MKEGKMPKVKKRKKEGGIQARVDSDLEETSEVEEERERPEIGSESESSTTYGPTKKKKKK
PKEKKERKPRKKKRDEEDDDDDDDDGNMKEPKSSSQLMQEWGLEDVQYGFTEDDYKTITN
YKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGASATAVAAAVAAAVETV
TVAQPTSVSGSSQPSSQPGPIKKAKTKEGKGPGVRKRSKSVKEVKKKPKPKKTKSKSGQS
GKKKKASSSEEDFLEESDFDDISIHSASVLSDTSGAATKKKARRGRKKRKKEDGDGYETD
HQDYCEVCQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEAKDDEE
EEEEPAGEEEDDHMEFCRVCKDGGELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCMC
PPLKGKVQKILHWTWGEPPLPAELPPGPDGKPNDPLTKPPLKGHPEREFFVKWAGLSYWH
CSWVSELQLELYHTVMYRNYQRKNDMDEPPPYDYGSGEEELNSEKRKSKDPQYAVMEERF
YRYGIKPEWMVIHRILNHSFDKDGDVHYLIKWRDLPYDQCTWEVDDFDVPEYDGHKASYW
DHREQILGEDQRPLVVRKGKKLKEDHQKREAIPDAPIIDPTIKFEHQPWYINATGGTLHP
YQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPFLVSAPLSTII
NWEREFEMWAPDFYVVTYTGDKDSRAIIRENEFTFEDSAVKTGRKVFRMKKDTPIKFHVL
LTSYELITIDQAILGSITWACLVVDEAHRLKNNQSKFFRILNGYKIYYKLLLTGTPLQNN
LEELFHLLNFLTPERFNNLEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPA
KTELIVRVELSPMQKKYYKFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVA
AVEAPVLPNGSYDGNLLVKSSGKLTLLQKMLKKLKDEGHRVLIFSQMTKMLDLLEDFLEF
EGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLASADTVIIYDSDW
NPHNDIQAFSRAHRIGQNRKVMIYRFVTRGSVEERITQVAKRKMMLTHLVVRPGLGSKTG
SMSKQELDDILKFGTEELFKDEMEAARAMGDNKDGEEGNVIHYDDDAISKLLDRSQDATE
DTEIQNMNEYLSSFKVAQYVVKEEDGEEEVEREIIKQEENVDPDYWEKLLRHHYEQQQED
LARNLGKGKRIRKQVNYNDTTQEDQEWQDDLSDNQSEYSVGSEDEDEDFEERPEGGRRQS
RRQLKSEKDKPLPPLLARVGGSIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDL
RGKSEREFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQE
FEHVNGKLSSPDLIPIGMELKKLTESLSSDPNTPVPASPVATQPGTPIPPDKTECLLGPA
EEKEATEQESKKLSEQETSSSEAAPAPEKAADSDEGKASSEEKTGEERDRTESPNTKTEP
SANPKESALKQSELSASQTSPKMEPCKETEKSSDKADNDSPLAKTEDKENKPDDAKNEDA
LEGRLNGDKDTLDEMDESRKEDKNGYKAKFMFNIADGGFTELHTLWQTEERAALSSGKMH
DIWHRRHDYWLLAGIVTHGYARWQDIQNDPRYAILNEPFKTEMHKGNYLEMKNKFLARRF
KLLEQALVIEEQLRRAAYLNMTQDPSHPAMALNTRFTEVECLAESHQHLSKESLAGNKPA
NAVLHKVLNQLEELLSDMKADVTRLPNMLSRIPPVSARLQMSERSILSRLTSRGSEPPPQ
QVRWDTPFSQGGFGCSQMYSSSFGGGFRGPGGQPMVNYSQMPLGPYVSVSTNGPPPPTSH
LDKKSLDSLRDVATPDLKSGKPSDVICIED
NT seq
6033 nt
NT seq
+upstream
nt +downstream
nt
atgccggggtcgctgagtaatgaagacgagggacaggacgacatggattttgaagacgat
atgccagacgaggatgacgaaggcgagcgcgagcgcaacaccgttcccctcacaccgctc
gacagcttcttctcggacaacgactccctcaaacaacaaaagaagaagaagcccaaaaag
atgaaggaggggaaaatgcccaaagtgaagaagaggaaaaaggagggaggaatccaggca
cgagtggacagcgacctggaggagacctcggaggtggaggaggaacgggaacgtccggaa
atcggctccgagagcgagagcagcaccacgtacggcccgaccaaaaagaagaaaaagaaa
ccgaaggagaagaaagagaggaagccgaggaagaagaagagagacgaggaggacgatgac
gacgacgatgacgacgggaacatgaaagagcccaaatcctccagccagctgatgcaggag
tggggtctggaggatgttcagtacggcttcaccgaggacgactataaaaccatcactaac
tacaaagctttcagccagttcctcaggcctctcatcgccaagaagaaccccaagatcccc
atgtcaaagatgatgacagtgttaggggccaagtggcgagagttcagtgccaacaacccg
ttcaaaggcgcatctgccaccgctgtggccgccgctgtggctgctgcagtggaaacggtt
accgtggcacagccgacgtctgtcagcggcagcagccagccgagctctcagccggggccg
atcaaaaaagccaaaaccaaagaggggaagggtccaggagtcagaaagagaagcaagtct
gtgaaggaggtgaagaagaaacccaagccgaagaagaccaaatcaaagtcgggccaaagt
gggaagaagaaaaaagcgtcctcgagcgaggaggacttcctggaggagtcagactttgat
gacatcagcatccacagtgcctcggtgctttctgatacctcgggggccgccaccaagaag
aaggcccgacgtgggcggaaaaaaaggaaaaaggaggacggtgacggttatgagacggat
caccaggactactgtgaggtttgccagcagggcggggagatcatcctgtgtgacacctgt
ccccgagcgtaccacctggtgtgtctggaccccgagctggagaaggccccagagggcaaa
tggagctgtccacactgtgagaaagagggtatccagtgggaggccaaagatgatgaggag
gaggaggaagagccagcgggcgaggaggaggacgaccacatggagttctgcagagtctgt
aaagatggaggagagctgctgtgttgcgacacctgcccttcctcttaccacatccactgc
ctcaacccgcctctgcccgagatacccaacggggagtggttgtgtccacgctgcatgtgt
cctcccctcaaaggtaaggtccagaagatcctgcactggacttggggagagcccccgctg
ccggctgagctgccccccggccctgacgggaagccaaatgatccgctgaccaagcctccg
ctcaagggccacccggagagggagttcttcgtgaagtgggccggcctttcgtactggcac
tgctcctgggtcagcgagctgcagttggagctgtatcacacggtgatgtatcggaactac
cagcggaagaacgacatggacgagcccccgccgtacgactacggctccggagaggaggag
ctcaacagtgagaagaggaagagcaaagacccccagtacgctgtgatggaggagcgcttc
taccgctacggcatcaaaccagagtggatggtgatccaccggatactcaaccacagtttt
gacaaagatggcgacgtgcattacctgatcaaatggagagacctgccctacgaccagtgc
acctgggaggtggatgactttgacgtcccggaatatgacggtcataaagcttcttactgg
gaccacagggagcagatactcggggaggaccaacgccccctggtggtgaggaaaggaaag
aaactaaaagaggaccatcagaagagggaggccattcctgacgctccaatcatagatcct
actatcaagttcgaacaccagccgtggtacattaacgccactggcgggacactgcacccg
taccagctggagggcctgaactggttgaggttctcctgggcgcagggcacagacaccatc
ctggctgatgagatggggcttggaaagacggtgcagacaatagtgttcctctactcgctc
tataaggaggggcactctaaggggcccttcttggtgagtgcgcccctctccaccatcatc
aactgggagagggagtttgagatgtgggccccagatttctacgtggtgacgtacactggg
gacaaagacagcagggcgatcatcagggagaacgagttcacctttgaggacagtgcagtc
aaaacaggacgcaaagtgtttcgcatgaagaaagacactcctattaaattccacgtgctg
ctgacgtcctacgagctaatcactatagatcaagccattctgggctccatcacatgggcc
tgcctggtggtagacgaagcccacagactgaagaacaaccagtcaaagtttttcaggatt
cttaacgggtacaagatctactacaagctgctgctcactgggactcctcttcagaacaac
ctggaggagctgttccacctgcttaacttcctcaccccagagcgcttcaataacctggaa
ggcttcctggaggagtttgctgatatctcaaaggaggaccagatcaagaagctccacgac
ctgctcgggcctcatatgctcaggaggctgaaagctgatgtgttcaaaaatatgcctgca
aagacagagttgattgtcagagtggagctcagtcccatgcagaagaaatattacaagttt
atcttgacgcgaaatttcgaggctctgaactccaaaggcggagggaaccaagtgtccctg
ctcaacattatgatggacctgaagaagtgctgcaaccatccctacctgttccctgtggct
gctgtggaggctcctgtgttacccaacggttcctatgatggcaacctcttagtgaaatcc
tcaggaaaactgacgctgcttcagaaaatgctgaagaaactcaaagacgaaggacacaga
gttctcattttctctcagatgacaaagatgttggatctgctggaggatttcctggagttt
gagggatataaatatgagcgtattgatggagggattaccggaggcctgaggcaggaagcc
attgaccgcttcaatgcaccgggcgctcagcagttctgcttcctgctctcaacacgagcc
ggaggtcttggcatcaacctcgcgagtgcagacactgtgatcatctacgactcggactgg
aatcctcacaatgacatccaagcttttagcagagcccaccgtatcggccaaaacaggaag
gtgatgatctaccgttttgtgacgcgcggctcggtggaggagcgaatcactcaggtggca
aagaggaagatgatgctcacccacctggtggtgcggcccggcctgggctccaaaactggc
tccatgtccaaacaggaactggacgatatcctcaagtttggcactgaggagctttttaag
gatgaaatggaagcagcgagagccatgggtgacaacaaagatggcgaggagggcaatgta
attcactacgatgacgatgctatctccaagctgctggaccgcagccaggacgccaccgaa
gacacggagatccagaacatgaacgagtacctgagctccttcaaggtggctcagtatgtg
gtgaaggaggaggacggagaggaggaggtggagcgggagatcatcaagcaggaggagaac
gtggacccggactactgggagaaactcctccgccatcactacgagcagcagcaggaggac
ctggctcgcaacctgggcaaaggcaaacgcatccgcaagcaggtcaactacaacgacacg
acccaggaggaccaagaatggcaggatgatctttcagacaatcagtcggagtactctgtg
gggtccgaggacgaggacgaagatttcgaggagaggcctgaaggtggacgcagacagtcc
cgtcggcagctgaagagcgagaaagacaaacctctgccgcccctactggcacgagttggg
ggcagtatcgaggtcctggggttcaacgctcgtcagaggaaggccttcctcaatgccatc
atgcgctgggggatgcctcctcaggatgctttcaactcccactggctggtcagagacctg
agggggaagagtgagcgcgagttcagggcctatgtgtctctgttcatgagacatctgtgt
gagccgggggcggatggagccgagacattcgctgacggagtcccacgtgagggtctgtcc
cgtcagcatgttctcaccaggatcggagtcatgtccctcgtcaggaaaaaggtgcaggag
tttgagcatgtaaacggcaagctgagctccccggatctgattcccatcggcatggagctg
aagaagctgactgagagtttatcctctgatccaaacactccagtgccggccagccccgtc
gccacccagcccggcactcccatccctccagataagactgagtgtctgctgggtcccgct
gaggagaaggaagccacagagcaagagagcaagaaactctcagagcaggaaacgtccagc
tcagaggcagcacctgcacccgagaaggcggctgacagtgacgagggcaaggccagctct
gaggagaaaacaggagaggagagggacagaaccgagtcacccaacacaaagacggagcca
tctgccaacccgaaagagtccgctttgaagcagagcgagctgtcagccagtcaaacctct
cctaaaatggagccttgcaaagaaacagagaagtcctcggacaaagcggataatgattct
cctctggcgaaaactgaagacaaggaaaacaagccagatgacgcgaagaatgaagatgca
ttagagggtcgattgaacggagacaaagacactctggatgagatggatgagagcaggaag
gaggacaaaaatggatacaaggccaagttcatgtttaatatcgctgatggaggctttaca
gagctgcacaccctctggcaaactgaagagcgagcagcgctgtcgtctggaaagatgcac
gacatctggcaccgccgacatgactactggctgttggctgggattgtaacacacggctac
gctcgctggcaagacattcagaacgacccacgttatgctattctgaatgagcctttcaag
actgagatgcacaagggcaactacctggagatgaagaacaagttcctggctcgtcgcttt
aagttgttggagcaggctctggtgattgaggagcagctgaggcgggcagcttacctgaac
atgacccaggacccgagtcacccggccatggcgctcaacactcgcttcactgaggtggaa
tgtctggcagagtcccaccagcacctgtccaaagagtctctggccgggaacaagcctgcc
aacgccgtgctgcacaaagtgctgaaccagctggaggagcttctgagcgacatgaaagca
gatgtgacacggctgcccaacatgctgtccaggatcccgccggtgtcggcccgcctgcag
atgtccgagcggagcatcctgagccgcctcaccagccgagggagcgagcctccaccgcag
caggtgaggtgggacacgcctttcagtcagggtgggttcggctgctctcagatgtacagc
agcagctttggaggagggttcagaggccccggtggacagccgatggtcaactacagtcag
atgcctctgggcccttatgtcagcgtgtccactaacggccctcctccccctacaagccat
ctggacaagaagtcacttgactccttgagagacgtggctactcctgacctcaaatcaggc
aaacctagtgatgtcatctgtattgaggactag
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integrated database retrieval system
