Semicossyphus pulcher (California sheephead): 138606429
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Entry
138606429 CDS
T10596
Symbol
optc
Name
(RefSeq) opticin
KO
K08127
epiphycan
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
spul00535
]
138606429 (optc)
Proteoglycans [BR:
spul00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class III
138606429 (optc)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_1
LRR_4
LRRNT
LRR_LRWD1
LRR_9
LRR_NLRC3
Motif
Other DBs
NCBI-GeneID:
138606429
NCBI-ProteinID:
XP_069534998
LinkDB
All DBs
Position
Unknown
AA seq
338 aa
AA seq
DB search
MSGLRSSLMGVLIGILVLVLLGPFPALSAPPGEPDGEVFDLESYDLTSETDWENLDVNIY
GDGYDYDDLDQEIEVGSIAPDSAPPTPQPTPEHHEEEVTPPTSHPIPSQPPAPVTLDFKG
PGLFGPETGLGMPTCLLCVCISGSVYCDDTGLDQIPPLPKDTTRFYGRFNRIRHVKNTDF
MNLQRLLSVDLSGNRISGMDEDVFVSLSHLQEVLLSDNHLKILPELPRSLRLIDLRNNQL
GSRGVHAEAFKDMSQLEFLYLSDNNLDYVPAPLPLSLRVLHLQNNNIQSLHEDTFCNRHD
RNFIRRNLEDIRLDGNPLNINLFPSAYVCLPRLPVGGH
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgtctggcctgaggagctctctaatgggggttctgatagggattctggtcctggtcctg
ttgggccccttccctgccctgtcggcccccccaggagaacctgatggagaagtgtttgac
ctggagagctatgacctgaccagtgagacagactgggagaacctggacgtcaacatttac
ggagatggttacgactacgatgacctggaccaggagatcgaggtgggctccatagcacca
gactccgcccccccaaccccccagcccacacctgagcaccatgaggaggaggtgactccg
cccacctctcacccaatcccttcccagcctccagcccctgtcactctggactttaagggt
ccaggtctgtttggacctgagaccggtctgggtatgcccacctgtctgctgtgtgtgtgt
atcagtgggagtgtgtactgtgacgacacgggtctggatcagatcccccccctccccaaa
gacacaacccggttctatggacgattcaacagaatccggcacgtgaagaacactgacttc
atgaacctgcagcgtctcctgtctgtggacttgtcggggaacaggatctctgggatggac
gaggacgtgtttgtgtctctgtctcacctgcaggaggtcctgctgtctgataaccacctg
aagattctacctgagctaccacgctctctgaggctcatcgacctgaggaacaaccagctg
ggtagcagaggcgtgcatgcagaggccttcaaggatatgagtcagctcgagtttctctac
ctgtccgataataatctggattacgtcccagccccgctgcctctgagcctcagagtgtta
cacctgcagaataacaacatccagtctctgcacgaggacaccttctgcaaccgacacgac
agaaacttcatccgcaggaacctggaggacatccgtctggacggaaacccgctcaacatc
aacctgttcccctccgcctacgtctgcctgccccgcctacctgtgggggggcactga
DBGET
integrated database retrieval system
