Semicossyphus pulcher (California sheephead): 138606819
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Entry
138606819 CDS
T10596
Name
(RefSeq) aggrecan core protein-like isoform X1
KO
K06792
aggrecan 1
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
Proteoglycans [BR:
spul00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
138606819
Glycosaminoglycan binding proteins [BR:
spul00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
138606819
Lectins [BR:
spul04091
]
C-Type lectins
Lecticans
138606819
BRITE hierarchy
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Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138606819
NCBI-ProteinID:
XP_069535385
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Position
Unknown
AA seq
1245 aa
AA seq
DB search
MASPEQLQAAFDDGFHQCDAGWLADHTVRYPIHDPRVNCYGDKEGLPGVRTYGVRDLNDT
YDVYCFTERMTGKVFHTASVEKFTFSEAVAACSAQGAQLANTGQLYLAWQGGMDVCNAGW
LGDRSVRYPINVRRTQCGGGLLGVRTVYLHTNQTGYPQSESRYDAFCYTESPDEEGSGSE
EEGSGMVTATTLTRTMEVFFSGKTTESEAVGELETLRPIVDFTFIASPSELPSPSELLSS
TVLPSLTGLPSPTGLPSSTGLPSPTGLPSSTELLLPQPTNVTEFITDRIESATTRPDLDL
LPSTGSVMPPTGVVFLYRSGSGRYTFTFIEAQQACRSMGASIASPQQLQVSYLAGYHQCD
AGWLLDQTVRYPIVSPRDKCAGDLGGEPGVRSYGLRPAEERYDVYCYIDGLRGEVFHVGS
AEGFTYDEAASSCQEQKAVLASTGELYAAWKMGFDKCRAGWLSDQSVRYPINSPRAECGA
GKPGVHTVYAHHNQTGYPEPEARYDAYCFRVDILLIAKETGLKVTDIQEALLNLTSLTDL
LRPAGPSIVPPIPVETSGSGSADFGSGSAVDSGSGSTSGDLSGDLSGGQFISGELSGSGN
WAGSASAGLSSGSSGFSSADASGSALSGEVSGITVVFSGSDSIVSREDSGSAGLQEAGEG
STEILLLPSSEAGSGLLSGSGDLPGSGTGSGFSSAESGSSVDSSGESGQFSGFISFKDFS
GFGGFPSGFSSGSASGRSGELSGSGDPQILLIDGEPIEMSSPNTHKEQELGGGILAFSGS
GDISGSGIFSGDLSGSASGFFSGVNFVGSGFTDLKVSSSEEQEASGSLLHSSGPGSGGHL
SGSGSGMSGSESSTSGDEGSVTFLSGDFMIEVSGDTKPSLKLGQGSVEFSGEGSSSSDFY
SGSGVNRMSSASGVSSGSSSGYLPQMVLPSPSSKWTLTESPTGPEEAHGGAELPQTLGGL
YRTRSPELAPAGLAAAFTAATPASEPSPGVNEDIVQGVSNPCEPSPCGAVSCSVEDGVAL
CHDEQLCEDGWNKFQGSCYLHVSDREVWLDAEQRCRDLNGHLVGIITPEEQHFVNSNAQD
YQWIGLNDKTVEKDFRWTDGTPLQYENWRPNQPDNYFHSGEDCVVMIWRENGQWNDVPCN
YHLPFTCKKGPVSCGAPPQVENAHMFGNRREEYPVGSIIRYQCDPGFRQRHLPVVRCTAD
GQWEKPRVECTDVKSRRRTEQRRAAGGGGAAGGGGAAAGGGGELH
NT seq
3738 nt
NT seq
+upstream
nt +downstream
nt
atggcttcacctgaacagcttcaggcagcgttcgacgatggattccaccagtgtgatgcc
ggctggctcgctgaccacacagtcaggtacccaatccacgatcctcgtgtgaactgctat
ggtgacaaagagggactgcctggggtcaggacatacggagtcagagacctcaatgacacg
tatgatgtgtactgtttcactgagaggatgacaggcaaagtgttccacaccgcctctgta
gaaaagttcaccttctccgaggcagtggctgcatgctcggctcagggagctcagctggcc
aacaccggtcagctgtacctggcctggcagggtgggatggatgtctgtaacgccggctgg
ctgggagacagaagtgttcgataccccatcaacgttcgtcggacccagtgtggagggggt
ctgctgggggtgcgaactgtttatctgcacacaaaccagacaggatacccacagtctgag
tcccgctacgacgccttctgttacacagagtctcctgacgaggagggttcaggctccgaa
gaagagggtagtggcatggtgactgctaccaccttgacacgaaccatggaggtgttcttc
agtgggaagaccacggagagcgaggcggtcggagagctggagactctgcgacccatcgtg
gacttcaccttcatagcaagcccgtctgagctgcccagcccgagcgagctgctgagttcg
accgtgctgccgagtctgaccgggctgccgagtccgaccgggcttccgagttcgaccggg
ctgccgagtccgaccgggcttccgagttcgaccgagctgctgctgcctcagcccacaaat
gtcacagagttcatcacagaccggatagaatcagctactactcggcctgacctagacctg
ctgcccagcacaggctctgtgatgcctcctactggtgtggtcttcctttatcgctctggc
tctggccgttacaccttcaccttcattgaggcccagcaggcctgcaggagcatgggagcc
tccatcgcctctccacagcagctacaggtatcatatttggctggatatcaccagtgtgat
gcaggatggttactggaccagaccgtcaggtatcccattgtttccccgcgagataaatgt
gctggagatctgggaggtgaacctggagttcggtcttatggattgaggccagcagaagag
agatatgatgtgtactgctacatcgatgggctcagaggtgaggtcttccatgtgggctct
gctgagggtttcacctacgatgaggcagcttccagctgtcaggagcagaaagctgtgctg
gcctccactggagagctctatgctgcctggaaaatgggttttgacaagtgccgtgctggc
tggctttctgatcaaagcgtccgctatcccatcaacagcccccgcgctgagtgtggagct
gggaaaccaggagtacacacagtgtacgctcaccacaaccagacaggatacccagaacct
gaagccagatatgatgcttactgtttcagagtggatattcttctgattgcaaaggaaact
ggacttaaggtcacagatatccaggaggccctcctgaacctgacatctctcactgatttg
ttgaggcctgctggtccttccatagtccctcccatccctgtggaaacttcagggtcgggc
tcagcagacttcggctcaggttctgcagttgatagtggctctgggagcacctctggagat
ctctctggtgacttgtctggaggtcagttcatctctggagagctgtctggttcaggaaac
tgggctggcagtgcgagtgctggtctttccagtggatcatcaggtttcagcagtgctgac
gcttctggatcagctcttagtggagaagtatctggtatcactgttgtcttctcaggtagt
gacagcattgtctcaagagaggactcaggttcagcaggactccaggaagctggagaggga
agcacagagatcctcctcctcccttcatctgaagcaggatctgggttgctgagtggtagt
ggtgatctgcccggttctggcactgggtctggtttcagctctgcagagagtggctcttct
gtggacagctctggggaaagtggacagttctccggtttcatctccttcaaggacttttct
gggttcggtggtttcccatcaggattttcttctggaagtgccagtggaagatctggagag
ctttcaggaagtggagaccctcagatcttactgatagatggtgaaccgatcgagatgtcc
agtcctaacacacacaaggagcaggagcttggtggaggcatcctggcattcagtggctct
ggagacatttcaggatctgggattttcagtggggatctcagtggctcagcttctggattc
ttctccggtgtgaactttgtggggtcagggttcaccgacctaaaagtgtcgtcctctgaa
gagcaggaggcctctgggtctttactccacagctcagggccaggaagtggtgggcacctg
tctgggtctggatcaggaatgtctggatcagagtcctcaacaagtggagatgaaggcagt
gttacattcctgtctggggattttatgatagaggtatcaggagacacaaaaccgtctctg
aagcttggacaggggtcggtggagttcagtggagaaggaagcagcagcagtgacttctac
tctggcagcggagtcaaccgcatgtcctcagccagcggtgtttcttcaggatcttcctca
ggatatcttccacagatggttctgccctctccatccagcaaatggacactgactgagagc
cccacaggaccagaggaggcccatggtggggctgaactgccacaaacccttggtggtctg
tatagaactcgcagccctgaacttgcccctgcaggactggctgctgctttcaccgccgct
acaccagcctctgagccaagtccaggtgttaatgaagatatagtacaaggtgtttctaac
ccctgtgaacccagcccatgtggtgctgtctcatgctcagtcgaagatggtgttgctctc
tgtcacgacgagcagctgtgtgaggacggctggaacaagttccaggggagctgctacctg
cacgtctctgacagagaggtgtggctggatgcagagcagcgctgcagggacctgaacgga
cacctggtcggcatcatcacccccgaggagcagcactttgtcaactcgaacgcccaggac
taccagtggatcggcctgaacgacaagacggtggagaaggacttccgctggacagacggg
acacctctgcaatacgagaactggaggccgaaccagccggataactactttcactctgga
gaggattgtgtggtgatgatctggcgcgagaacggacagtggaacgacgtgccctgcaac
tatcacctgcccttcacctgcaagaaaggcccagtgtcgtgtggcgccccccctcaggtg
gagaacgcccacatgttcggtaacaggagagaggagtatcctgtcggctccatcatcagg
tatcagtgtgacccaggcttcagacagcgccacctgcctgtggtccgctgcacagcagat
gggcagtgggagaaacctcgggtggagtgcacagacgtgaaatccagaagaagaacagag
cagaggagagcagcaggaggaggaggagcagcaggaggaggaggagcagcagcaggagga
ggaggagagcttcattag
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