Semicossyphus pulcher (California sheephead): 138607310
Help
Entry
138607310 CDS
T10596
Symbol
frem1b
Name
(RefSeq) FRAS1-related extracellular matrix protein 1b
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04512
ECM-receptor interaction
Brite
Lectins [BR:
spul04091
]
C-Type lectins
Lecticans
138607310 (frem1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138607310
NCBI-ProteinID:
XP_069535995
LinkDB
All DBs
Position
Unknown
AA seq
2159 aa
AA seq
DB search
MVAVSVLLLLLVATSLCSGGLVVVNSGVEVSRGGSVFVTEKELKISVGQSVDCKVEVVMN
EPVTQRVGKLTPQVFDCSFLEDEVKYVHSGSPLLDEDAVMLRVYRFTSSDTQVETVVLPV
RVMDSGSGVVELGSAPLVVPQFYGLSNAIDSSVLNIRTTADLVCIVRLMTTDTGVPALGQ
LVREEDATQRKGRETAALCPGNKPCLHHTKEVRFLKTSCQDFLSSGLKYQHLSPPSPEID
YIPIRVELREQATRALLEAESIWLPVLIHGAMQNQLPQAAFMASFILEVDQFILTPLTTA
ALDAKDHETPQERLVFNMTVPPADGYITHLDDHTKPITSFTWLDLHEMKVAYQPPNSSQS
QRRNYEVEFQAIDGSYMTSPPMMVHISIRAAETNAPRVSWNMGLDLLEGQSRPITWEELQ
IVDNDNINAVFLVAVDGPLHGRLSVRGGKAFMFRVRDLKDGVVVYHHSDSDTTRDHIVFR
ISDGRHSIRHKFPINILPKDDSPPFLINNVAVEVQEGGAVRLEEYMLLASDLDSSDDYIL
YQLVSKPRAGQLVRKTSTHEAGAPVDGFLQRDLIQGQIFYQHSGDETFEDSFDFTLSDSH
QPPNLSQTYTVVVHVFPVKDQLPVEVSGSVRSLTVKETEVVYVTQAHLHFTDREHPDTDL
TYVITQPCFSPVHPGLMDAGRLFYTDSTNAMKKDHMVAVLKSFTQHAVNHMKVAFMPPVE
DIGPEPLFVHFVFSVSDHHGGTVSDLLFNITITPVDDQAPEAFSNLLRVEEGGGAFVTEE
HLLVQDRDSREEVLRVEVQRTARHGRLELQGQTLLQGDRFSLQDLRGLRLRYIHDDSETT
EDEVGLKVTDGLNSADVVLPIQVLPMNDEPPQLGGGLRGELSCEEGGRVQVTVDYLSATD
RDSEDSRLTYMLARSPGRGQLQRAGLSVDKFSQQDLLQGHVYYVHTGGEIGPEPVFDTVT
LIISDGEAGGTEGCCHGEAPPPPVPLHGTLPVYDLNITILPVNNQVPTITLGDSMFVVDE
GSSACLCAGVLGASDPDSPPDQLTFHLETLPVHGFLENTLPTPGSEKSNAGVRVESFSLI
HLTSGFINYVQSESKGAEPTVDQLSISVSDGLHRSAPVPFYIIINPTNDETPSLLLANFT
LKEGGMRELTPSILNGFDLDAPLDVLTFTVVQPPAHGSLINGIYGTEMSRYKEMGADLLQ
RSLPITSFTLQELRQGMKIVYMHDDTETLKDVVSLRLTDGVHTVQGTAQVTLLPVNDEKP
RLLKNAGLQVDSGERRVISSVVLEAEDLDTPPNQVYYFLNAAPRFGKLLLKTESGWSELS
AGQNFTQDDVEMNRLWYAHTAATNTAGFKGHDSFRFTLSDLDNESPAQSFFISVHTVQKG
DLVLLSKAVHLTEGQRVVLNTDILLASDSSGRPEELVYTVSVPPRHGLVHAVHQPGVPLV
SFTQLDVAAHRVCYTHDNSHHAETDSFSFVITNGDSSRSGTLHFTIEHGDRIPPALYHNT
GLRLQDGSTETITAEQLQLTDPDTASANLSFIVTQPPRYGKLLLRGVPLSAPPRFTQADV
DELNVAYRHDPSSPAEIDRFYFLPTDGSNRGYLEFGQLREEPAIFNIQVHRMDRTPPSLT
TRRSPSTVVDLGGGRYGVFITSKHLQASDPDSPTEELEFSVIRPPHFGYLENALTGAYIR
GRFTQQDVDQRAVMFVLPADMEVTADSFQFRLVDPAGNTALPEILDLSWSRVELSATCYR
TCETAGTLQIQIQRSGKSADPAYVAIQVEEGSAKPGRDFTHSTAGLIQFDPGVSVKTWNI
HLIDDGLEENHETFTVTLKNPKNSVLGQRTSASVEIIDPRGGRCDPDDLRVEDDEKRLPA
LPPPPRLPDPPRAEEEEDPVTDIEAELLWENQPHPPRGDVPNRRPYLDYTEGEPQDQAAP
SYSHIHHHSRQLPGTSTGSTGSTGHRVRHEGLKVHLSGERRSEEKVWTFHSLTPLRLEEL
KPGDAGWSQRPHSRLLQELPIGDPPQMDHPEPRHPPELRQRKTGKSVTSSCPDGWTHYRR
RCYVVSSSVASWGSAERTCSLLFNSSLTSVRSRRDMTWLWKFAGRKPFWIGLSGGPGRWM
WADGRSVSFSRLKGVPPGRSESDVGSDCVLVENPRSWISTSCSPETQHTFICSSPAHTH
NT seq
6480 nt
NT seq
+upstream
nt +downstream
nt
atggttgccgtcagtgtgttgttgctgctgctggtggcgacgtccctctgcagcgggggt
ctggttgtggtgaactcgggcgtggaggtctcacggggtggatcagtgttcgtcacagag
aaggagctgaagatcagcgtgggtcagagcgtggactgtaaggtggaggtggtgatgaac
gagcctgtcacacagagagtgggaaagctgacgccacaggtgtttgactgcagcttcctg
gaggacgaggtgaaatacgtccacagtggaagtcctctgctggacgaggacgcagtgatg
ctgagagtctacaggtttacgtcctcggacacgcaggtggagacggtggtcctgccggtg
cgggtgatggactcggggtccggtgtagtggagctcggcagcgccccgctggtggttcct
cagttctacggtttatctaacgccatcgacagctccgtcctgaacatccggaccacagcc
gacctggtctgcattgtcagactgatgaccacggacactggcgtccccgctctgggtcag
ctggtgagggaggaggacgctacgcagaggaagggcagagagacagcagcgctctgtccg
gggaacaaaccctgtcttcatcacaccaaggaggttcgattcctcaaaaccagctgccag
gacttcctgagctccggtctgaagtaccagcacctcagccctccgtcaccagagatcgac
tacatccccatcagggtggagctgagggagcaggccaccagggcgctgctggaggctgag
tcgatatggttaccagttctgatccatggagcgatgcagaaccagctgccccaggccgcc
ttcatggcctccttcatcctggaggtggaccagttcatcctcaccccgctcaccactgcc
gccctggacgccaaggaccacgagacgccgcaggagaggctggtcttcaacatgaccgtc
ccacctgccgacggctacatcacccatttggacgaccacacaaagcccattacgtccttc
acctggctggacctccatgagatgaaggttgcctaccagccgcccaacagcagccaatca
cagcgcaggaactatgaggtggagttccaggctatagacggttcctatatgaccagcccg
cccatgatggtccacatctccatccgagcagctgaaacaaacgcacccagagtctcctgg
aacatgggcctggatctgctggagggtcagtcccgaccgatcacgtgggaggagctgcag
atagtcgacaacgacaacatcaacgcggtcttcctggtggctgtggatggacctcttcat
ggacgccttagtgtcagaggtgggaaggcgttcatgttccgtgtgcgcgacctgaaggac
ggcgtggtcgtctaccaccactccgacagcgacaccacccgcgaccacatcgtcttccgc
atcagcgacggccgccacagcatccgccacaagttccccatcaacatcctgcccaaggac
gactcgccgccgttcctcatcaacaacgtggcggtggaggtgcaggagggcggggccgtg
cggctcgaggagtacatgctgttagcctccgacctggactccagcgacgactacatcctc
taccagctggtgtccaaaccccgggcggggcagctggtcaggaagacctccacccacgag
gcaggagctccagtggacggtttcctgcagagagatctgatccagggtcagatcttctac
cagcactcgggagacgagacgtttgaagactccttcgacttcacgctgtcggacagccac
cagccgcccaacctctctcagacttacacggtggtggtccacgtctttccggtgaaggac
cagctgccggtggaggtttcgggcagtgttcgctctctgacggtgaaggagacggaggtg
gtttacgtcactcaggctcacctgcacttcaccgacagagagcatccagacacagacctg
acctacgtcatcacacagccctgcttcagcccagtgcatcctgggctgatggacgcagga
cgtttgttctacacagacagcaccaacgccatgaagaaggaccacatggtggcggtgtta
aagtccttcacacagcatgcagtcaaccacatgaaagttgccttcatgcctcctgttgag
gacatcggccccgagccgctcttcgtccacttcgtcttctcagtcagcgaccatcatggc
ggcaccgtctccgacctcctcttcaacatcaccatcacccctgtggacgaccaggctcca
gaggcgttctctaacctgctgcgggtggaggaggggggaggggcctttgtgacggaggag
cacctcctggttcaggaccgggacagccgggaggaggtgctgagggtggaggttcagcgg
acggctcgccacggccggctggagctgcagggccagacgctgctgcagggagacagattc
agcctgcaggacctgagaggactccggctcaggtacatccatgacgactctgagacgacg
gaggatgaggtgggcctgaaggtgacggacggtctgaactcagcagacgttgttctgccg
atacaggtcctgccgatgaacgatgaacctccgcagttgggtgggggtctgcggggggag
ctgagctgcgaggaaggggggcgggtccaggtaacggtagactacctgtcagccacagac
cgggacagcgaggactccaggctgacctacatgctggcccggagtccaggcagagggcag
ctgcagagagccggactcagcgtggacaagttctcccagcaggacctgctgcagggacac
gtctactacgtccacacaggaggggagatcggacccgagcccgtctttgacaccgtcacc
ctcatcatctctgacggagaggcgggagggacagagggatgttgtcacggagaagccccg
cctccacctgtacctctgcacggcacacttcctgtgtatgacctcaacatcaccattctt
ccggtcaacaaccaagtccccacgatcactctgggtgactccatgttcgtggtggacgag
ggctcctcagcctgtctgtgtgcgggggtcctgggggcctcggaccctgacagccccccc
gaccagctgacctttcacctggagactctgcctgtgcacggcttcctggagaacacgctg
ccgacgcccggctccgagaagagcaacgcaggagtccgagtcgaatccttcagtctcatc
cacctgacctctggtttcatcaactacgtccaatcagagagcaaaggggcggagccgact
gtggaccagctgtccatcagtgtgagtgacgggctgcatcgctccgcccccgtccccttt
tacatcatcatcaatccgaccaatgacgagacgccttcgctgctgctcgccaacttcacc
ttgaaggagggcgggatgagggagctgactccctccattctgaacggctttgacctggac
gcccccctggacgtcctgaccttcaccgtggtgcagccgccggctcacggcagcctcatc
aacggcatctacggcaccgagatgagccgctacaaggagatgggagccgacctcctgcag
aggagcctccccatcacctccttcaccctgcaggagctccgacaaggcatgaagatcgtg
tacatgcacgacgacacagaaaccctgaaggacgtcgtgtctctgcggctgacagatggc
gtccacacagtgcaggggacggctcaggtcaccctgctgccggtcaatgacgagaagccc
cgactgctcaagaacgctggcttgcaggtggactcaggtgagcgcagggtgatctccagc
gtggttctggaggccgaggacctggacacgcccccaaaccaggtgtactacttcctgaac
gccgcgccgcgcttcggcaaactgctgctcaagaccgagtcgggttggagcgagctgtcg
gccggtcagaacttcacccaggacgacgtggagatgaaccgtctgtggtacgcacacacc
gccgccaccaacactgccgggttcaaaggtcacgacagcttccgcttcaccctgagcgac
ctggacaacgagagtcctgcacagagcttcttcatctccgtccacactgtgcagaaaggt
gacttagtgctcctgagcaaggcggtgcatctgacggagggccagcgggtcgtcctgaac
accgacatcctgctggcgtcggactcgtcgggtcgtccggaggagctagtctacacggtg
tccgtccctcctcgacacggcctcgtccacgccgtccatcagcccggagtcccgctggtg
tccttcacacagctggacgtggctgcacaccgagtgtgttacacacacgacaacagccac
cacgcagagaccgactccttcagttttgtcatcacaaacggagactcgtcccgcagcggc
accctccacttcaccatcgagcacggcgaccgcatcccgcccgccctgtaccacaacacg
gggctgcggctgcaggacggctccacagagaccatcaccgccgagcagctgcagctcacc
gaccccgacaccgcctctgccaacctgagcttcatcgtcacacagccgccgcgatacggg
aaactgctgctgagaggagtcccgctgtcagcgccgcccagattcacccaggccgacgtg
gatgagctgaacgtggcgtacagacacgacccgagcagcccggctgagattgacaggttc
tacttcctgccgaccgacgggagcaacagaggatacctggagtttggacagctgagggag
gagccagctatctttaacatacaggtgcatcgcatggaccggacacctcccagtctgacc
accaggaggagtcccagcactgtagtggaccttggcggcgggcgttacggcgtcttcatc
acctccaaacacctgcaggcctcggaccccgacagcccaacagaggagctggagttctct
gtcatccgaccacctcacttcggctacctggagaacgctctcacaggagcgtacatccga
ggtcgtttcacccagcaggacgtggaccagcgtgccgtcatgttcgtcctccctgctgac
atggaggtgactgctgacagcttccagttccgcctggtcgacccggcaggaaacacagcg
ctgcctgagatactggatctgtcctggtctcgggtggagctgtcggcgacctgctacaga
acctgtgagacggcggggacgcttcagattcagatccaacgcagtgggaagagcgccgac
ccggcgtacgtcgctatccaggtggaggaaggatcggccaaaccgggcagagatttcact
cacagcacagctggtctcatccagtttgacccaggagtcagtgtgaaaacctggaacatt
cacctgatagacgacggtctggaggaaaaccacgagaccttcactgtcactctgaaaaat
ccgaaaaacagcgtcctgggtcagaggacgtctgccagtgtcgagatcattgaccccaga
ggaggaaggtgcgatccagacgaccttagggtggaggacgacgagaaacgactcccagct
cttcctcctcctcctcgcctccccgacccccccagggcggaggaggaggaggaccccgtc
acggacattgaggcggagctgctgtgggagaaccagcctcaccctcccagaggtgacgtc
ccaaaccggcggccctacctggactacacggagggagagccacaggaccaggcagccccc
agctacagccacatccaccaccacagcaggcagctgcctgggaccagcactgggagcact
gggagcactggacacagggtcagacatgaaggattaaaggtccatctgtcaggagagagg
aggtctgaggagaaggtctggacgttccacagtctgactcctctccggctggaggagctg
aagccgggtgatgccgggtggagtcaaaggcctcacagtcgcctcctgcaggagctcccg
attggagaccctcctcagatggatcatccagaacccagacacccaccagagctacgccag
cggaagacggggaagtctgtcaccagctcgtgtcctgacggttggactcactacaggagg
cgctgctacgtcgtcagctcgtctgtggccagctgggggagcgcagagaggacctgctcg
ctgctgtttaacagcagcctgaccagcgtgcgctccaggagagacatgacctggctgtgg
aagtttgcagggaggaagcctttttggatcggtctgtctggaggcccaggtcgctggatg
tgggctgacggtcgctcagtgtccttctccagactgaagggggtgccaccgggtcgaagc
gagtctgacgtgggctcagactgtgtcctggttgaaaaccccagaagctggatctccacg
agctgctcccctgaaacgcagcacacgttcatctgttcgtccccggctcacactcactga
DBGET
integrated database retrieval system
