KEGG   Semicossyphus pulcher (California sheephead): 138607601
Entry
138607601         CDS       T10596                                 
Symbol
lsm7
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
  KO
K12626  U6 snRNA-associated Sm-like protein LSm7
Organism
spul  Semicossyphus pulcher (California sheephead)
Pathway
spul03018  RNA degradation
spul03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:spul00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    138607601 (lsm7)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    138607601 (lsm7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:spul03019]
    138607601 (lsm7)
   03041 Spliceosome [BR:spul03041]
    138607601 (lsm7)
Messenger RNA biogenesis [BR:spul03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     138607601 (lsm7)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     138607601 (lsm7)
Spliceosome [BR:spul03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    138607601 (lsm7)
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 138607601
NCBI-ProteinID: XP_069536336
LinkDB
Position
Unknown
AA seq 103 aa
MADKEKKKKESIFDLSKYIDKPIRVKFQGGREASGVLKGFDPLLNLVLDGTIEYMRDPDD
QLKLTEDTRQLGLVVCRGTSVVLICPQDGMEAIPNPFIQQQDG
NT seq 312 nt   +upstreamnt  +downstreamnt
atggcggataaagaaaagaagaaaaaggagagcatcttcgacttgtcaaagtacatcgac
aagccgatacgtgtgaagtttcaaggaggacgagaagccagcggtgtcctgaaaggtttt
gaccctctgttgaacctggtgttggacggcacaatcgagtacatgcgagatccagatgac
cagctgaagctgacagaagacacccggcagctggggctggtggtctgcagaggaacgtcc
gtagtgctaatctgtcctcaggacggcatggaggccatacctaaccccttcatacagcaa
caggatggctaa

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