Semicossyphus pulcher (California sheephead): 138607665
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Entry
138607665 CDS
T10596
Symbol
rfc4
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03030
DNA replication
spul03410
Base excision repair
spul03420
Nucleotide excision repair
spul03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
138607665 (rfc4)
03410 Base excision repair
138607665 (rfc4)
03420 Nucleotide excision repair
138607665 (rfc4)
03430 Mismatch repair
138607665 (rfc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spul03032
]
138607665 (rfc4)
03036 Chromosome and associated proteins [BR:
spul03036
]
138607665 (rfc4)
03400 DNA repair and recombination proteins [BR:
spul03400
]
138607665 (rfc4)
DNA replication proteins [BR:
spul03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
138607665 (rfc4)
DNA Replication Termination Factors
ELG1-RFC complex
138607665 (rfc4)
Chromosome and associated proteins [BR:
spul03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
138607665 (rfc4)
DNA repair and recombination proteins [BR:
spul03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
138607665 (rfc4)
Check point factors
HRAD17(Rad24)-RFC complex
138607665 (rfc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
RCF1-5-like_lid
DNA_pol3_delta2
Rad17
AAA_30
AAA_16
AAA_assoc_2
AAA_22
AAA_11
Gp44_lid
AAA_24
Mg_chelatase
AAA_19
DUF815
SLFN-g3_helicase
AAA_28
RuvB_N
AAA_14
AAA_5
ResIII
DNAX_ATPase_lid
Cdc6_lid
AAA_7
AAA_3
Motif
Other DBs
NCBI-GeneID:
138607665
NCBI-ProteinID:
XP_069536407
LinkDB
All DBs
Position
Unknown
AA seq
358 aa
AA seq
DB search
MQAFLKGATVQSTRPQKDKAAAGPSTEKKAKALPWVEKYRPKCVDEVAFQEEVVAVLKKS
LEGADLPNLLFYGPPGTGKTSTILAAARELYGPELYRQRVLELNASDERGIQVVREKVKT
FAQLTVAGTRSDGKLCPPFKIIILDEADSMTAPAQAALRRTMEKESRTTRFCLICNYISR
IIEPLTSRCSKFRFKPLANQIQEERLLQICQKENLKYTKESIAALVKVSEGDLRKAITFL
QSAARLNVDKEITERCVIEIAGVVPPKMIDNLFQVCFKGTFEKLEVAVRNMVDEGYAATQ
ILSQLHDSIIEEDLSDKQKSAITEKMAVVGKCLSDGADEYLQMLSLCSVIMQQASQNN
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcctttttgaaaggagcaactgttcagtctaccagacctcagaaagacaaggca
gcagcaggacccagtacagaaaagaaagccaaggcacttccttgggtagaaaaatacagg
ccaaagtgtgttgatgaggtggcctttcaggaggaggtggtagcagtgctgaagaaatct
ctggaaggagcagatctcccaaatttgctcttttatggacctcctggaacaggaaagacc
tccaccatcttagctgcagccagagaactttatggtcccgagctatacaggcagagggtg
ctggagctcaacgcctctgatgagcgaggcatccaggtcgtcagagagaaggtcaagacc
tttgctcagctcactgtggctggcactcgctcagatgggaagctgtgtcccccttttaag
atcataatccttgatgaggctgactccatgactgcaccggctcaggctgctctcaggcgg
accatggagaaggagtcacgaaccacccgcttctgcctcatctgtaactacattagcagg
attattgagcccctgacctccagatgttccaagtttcgtttcaaacctttggccaatcag
atccaagaagagcgcctgttgcagatctgtcagaaagagaacctcaagtacaccaaagag
agtatagcagcgttggtgaaggtgtctgagggagacctgcggaaagccatcaccttcctc
cagagtgctgcgcgcctcaatgtggacaaggagatcacggagcgctgcgtcattgaaata
gctggggtcgttcctcctaagatgattgacaacttgttccaggtctgcttcaaaggcacg
ttcgagaaactagaggtcgcagtcaggaacatggtggatgaaggctatgcagccacgcag
atcctgagtcagcttcatgattctataatagaggaagacctgagcgacaagcaaaagtca
gccattacagaaaagatggcggttgtaggtaagtgcctgtcagatggtgcagacgagtac
ctgcagatgctgagtctgtgttcagtcatcatgcagcaggcttcccagaacaactaa
DBGET
integrated database retrieval system
