Semicossyphus pulcher (California sheephead): 138607896
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Entry
138607896 CDS
T10596
Symbol
lingo3a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 3a
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spul04131
]
138607896 (lingo3a)
Membrane trafficking [BR:
spul04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
138607896 (lingo3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
I-set
Ig_3
LRR_1
LRR_14
ig
Ig_2
LRR_EndoS
LRR_9
LRRNT
V-set
LRR_6
LRR_Zer-1
Cupin_1
Motif
Other DBs
NCBI-GeneID:
138607896
NCBI-ProteinID:
XP_069536655
LinkDB
All DBs
Position
Unknown
AA seq
609 aa
AA seq
DB search
MGTGLGQDVGWLLPFLFWLMVTVSPAQGQGCPQRCECITKLKTVSCYGKRLSTLPDGIPL
DTKILDLSGNKLRWVEHGDLLPFQRLEKLDLSENMISVLEPNAFSSLQNLQTLSLRGNQL
KLVPMAAFSRLSNLTSLDLSGNKIVILLDFTFQDLRSLKNLEVGDNDLVYISNKAFLGLV
GLRELTIERCNLTSVSSQSLSYLHNLVTLRLRYLSISALEDQNFRKLGNLRGLEIDHWPF
LEYISPHSLQGLNLSWLSITHTNITSVPTSALRSLAHLTSLNLSYNPISVLESWALRDLV
RLKELHLVNTNLAAVQPYAMGGLRQIRLLNLSTNSLVTLEEGAFQSVNTLETLRLDANPL
ACDCRLLWILQRRKTLNFDGAAPVCTTPVEVQGRALNAFSDSALFDHFTCQKPKIRNRKL
QQISAREGQVVSFICKAEGEPTPVIFWISPQRRRITTKSSGRLTVLPEGTLEIRYAQVTD
SGTYICIASNAGGNDTYFATLTVSGLPLDAALMANRTYYAGDLNDTNLNDTRVFLKFTLD
LKTILISTAMGCIMFLGVVLFCFILLFVWSRGRGQHKNNFSVEYSFRKVDGPAASGGQGG
ARKFNMKMI
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggggacgggcctgggtcaggatgtaggctggctcctgccgttcctgttctggctgatg
gtcacagtgtcacccgcacagggccaaggttgtcctcagcgatgtgagtgcatcacaaaa
ctcaagacagtgtcctgttatggtaaacgcctgtccacactgccagacggcatcccactg
gacacaaagatcctggacctgagtgggaacaaactccgctgggtggagcatggcgacctg
cttccctttcaacgtctggagaagctggacctgagtgagaacatgatcagtgtcctggag
ccgaatgctttttcgagtctgcagaacctgcagacgctttcattgaggggtaaccagttg
aaactggtccccatggcggctttctctcgtctctccaacctaacttcattggacctcagt
gggaataagatcgtaatccttttggactttactttccaagacctgagaagtctaaaaaac
ctggaagttggagacaatgatttggtttatatatctaacaaggcctttctgggtctggtg
gggctgagggagctgactatcgagaggtgcaacctgacgtctgtgtccagccagtctctg
tcttacctgcacaacctggtgactctgcggctccgctacctcagcatctccgccttagag
gaccagaacttccgaaagctgggaaacctgaggggcctggagatcgaccactggcccttt
ttagagtacatttcccctcacagcctgcaggggctgaacttatcttggctgtctatcacg
cacacaaacatcacctctgtgcccacctccgccctgcgcagcctcgctcacctcaccagc
ctcaacctctcctacaaccccatctccgtgctggagtcgtgggcgctgcgggaccttgtt
aggctgaaggagctgcatctggtcaacactaacctggcagcagtgcagccgtatgcaatg
ggtggtctgaggcaaatccgccttcttaacctctccactaacagcctggtgaccctggag
gagggagcctttcagtctgttaacactctggagacgctgcgtttggatgccaaccctctg
gcttgtgactgccgcctgctgtggatccttcaacgcaggaagactcttaattttgacggc
gctgccccggtgtgtacgacgcctgtggaggtgcagggtagggctctaaatgctttctca
gactcagctctctttgatcactttacttgccagaagcccaaaatccgcaacaggaagctg
cagcagatatctgcccgcgaggggcaggtggtgtcgttcatttgcaaagcagaaggtgag
ccgacgccagttatattctggatctctcctcaacgccgccgcatcactacaaagagcagc
ggccgcctgactgtgttgccagaaggcactttagaaatacgctacgcccaggtaacagac
agtggaacttatatctgcatagccagcaatgcaggtggaaacgacacctattttgccaca
cttacagtcagcgggctgcctttagacgcagccctcatggccaaccgcacttactatgcc
ggggacctaaatgacacaaatctaaacgacaccagagtcttcttgaagtttactctggac
ctaaagaccatcctcatatccacagctatgggctgtatcatgttcctgggggtggtgctc
ttctgtttcatcctgctgttcgtgtggagtcgagggagagggcagcacaagaacaacttc
tctgtggaatattccttcaggaaagtggacggacctgctgccagtggaggacagggtggg
gcgcgcaagttcaacatgaaaatgatttga
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