Semicossyphus pulcher (California sheephead): 138607922
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Entry
138607922 CDS
T10596
Symbol
crocc2
Name
(RefSeq) rootletin
KO
K16469
rootletin
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
spul03037
]
138607922 (crocc2)
Cilium and associated proteins [BR:
spul03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
138607922 (crocc2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rootletin
ATG16
PUMA_CC
DUF5930
Tropomyosin
Motif
Other DBs
NCBI-GeneID:
138607922
NCBI-ProteinID:
XP_069536683
LinkDB
All DBs
Position
Unknown
AA seq
1944 aa
AA seq
DB search
MSSQREPGAHSPRLEAVIQKLEESLLRSDSSSGEGTLTLRGDGQESSVTPSPVSSRIRQI
ITRNLSEQQTVESSEVTELEESKALREQPSPSQMNHDQPSVKQASLTDRVGLDQMLMPQS
AVDSDQDSVSPASLQTLQSKERAYRQKLQVYQEAQQRQAQLVQKLQTKVLQYKKRCGELE
EKVLEKTSGAEKMRLVLQAHLDSAQRQQRTEQDLNVAIQNKSAQLEEEQKRCAGLSQVNS
MLREQLEQAGTVNIGLTESLWKAREDIDLCDNRLRREQETCASRLSREQARVRDLWRQAA
SLRSTFTQLRTFTDRTMSDMRGDCVAASRQLHVACMNLEARVTQESSSSGTGMSALERQL
KEKLKEAMQLQGRWDAEKVELNSRVLELTDTVKHLRSQNSEKDASLDTMQNSLDRMETRR
TEDKGEMEVLHTEMQALQKLLCHVQQMVGGEDDSSGFESVSFSPLHGRSPLRNTTLMAVQ
SALSKHHKQTQDLRGRLDAALEQVNTLRDHLQEKDTERKELEQKIQDERRESQEAKKALE
ESLRDSSRYRCSMELISSEKSSLEKLLSGLQQEVDSQRAELEALRGSSLELQRQRDLLRQ
QREDLEMQLTRQRTEAQRGERSLEELEAKHSDLRRELVTVKEALSQITLQKEVLEDDKAS
LALALSKMESQSAAHELAFTKLQNQEAALKDSLAKMAALSEGLAKDKVELNRIVLQSEGE
KAEFAERRREAEVERAVAREETTRLQQEMMNLLVEKQALESSHSHLQDLCQSLEAELSLL
QRENAQTLEQHSQVNKQMQSVSEELCACRKELETQTTALKRATHDREELAKDKAALDVKL
NSVDRKACGLTQELVALRAEKESLETVLFESQELASSLEAERTRMEGERRSLLLANEALT
RDGARMRADAERQVVLAAQEHSKLEEKLVQVERNALQTLNNKEQIHREQLEAERQQMEQQ
RAELTLKREQAEEQLRRQCEEVRVRSQKELQQVQEEQARLQQDFNQSLLQAESEKQQALS
QKEAEKVELTEKLAALQQDLATAGMELELMQREALSKQEQDRNVMDVLQSELQGLRTQFE
ESLNSNENAKKSLTEQVRELTQQTEHTQQELEGLRRQLQETEDGLIKGKTELIEAHRELQ
ECAQQRDTQRKEALDLRRLLGDETREKETIQASNQELRVLIKRAECDNSSLRRSLEEKEQ
KVVVLEECRTSLHQEAMSLRSSMRELEKSRLQARRELQELRRQVKVLEGENSRQKQELRE
LQARVCQEEQKEEEARCEAFTLKQRVLECEAGREAALNEVAGLQRRVVELETVEHKTQDL
LQEREAYQQQCEQKHREITAQLEEALEDAQIQVKELSAQVGLAERKVQGLEEQLCLSDAK
RRELELKLSGLYSTLRHTVCTGHTRLLGNPASRKRSPSPWRNHHVKDEDMDLESVHAALR
EFQQELRDTHRERDEAKAQIVSVSRQLKELEGSQDMSATQLLQLQKSLKHAEQGKREMAE
RLHEAHTSLSMQEEAAHRTEGEKRRLEEEVAQLRASLQAAAAESRALQDKLELLQGSESR
ANIEQQKQKESLEAAETRASRLELSHRTLEGELQRAQLRAAELDAEAGALQERLTELRRK
LGESEDRCAALRVSEERLATALARAEQHESQLREQIHKLSNTLSDNRSSSGALQEQVTQL
QRALTASEQDRRLLQERLDKTRDALSESKRLSHKLTEQVQNLQRTQEDLELKNCELEKHN
RTLKESRKQQHEAEVQAQVSSQQLEREKEDLRDKVTNLQKSLQKLQSERAEMERVLTRLG
KDKSALRKTLEKVEMERLRGEEEAAASAGREKEQLGQRVRSLEVQLAEKQEEVQTVQAQI
SLLEHSHAQRLLEVTARHHQELDLETDRLRDSQLQAEQALETREKAHRQRVRCLEEQVLT
LKEQLDQETRRRQAYFNQMLQPGV
NT seq
5835 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcaacgggagccaggtgcacactcacctagactggaggctgtgattcagaag
ttggaggagtccctgcttcgctcagacagcagctctggggaggggactttgacactgcga
ggtgatggacaagagtccagtgtcacaccttcaccagtctccagccgcatccgccagatc
atcacccgcaacctgtcagagcagcaaactgtcgagagctctgaggtcactgagctggag
gagagcaaggccctgagggagcagccgtctccgagccagatgaaccatgaccagccgtca
gtcaaacaggccagtctcactgacagggtaggacttgatcagatgctgatgccgcagtca
gcagtggactcagaccaggacagcgtgtcaccagcatccctgcaaacccttcagagcaag
gagagagcttacagacaaaagctacaggtctaccaggaggcccagcagagacaggcccaa
cttgtacagaagcttcagaccaaggtacttcagtacaagaagagatgtggggaactggaa
gaaaaagtgctggagaagacctccggggctgagaagatgagattggtgctgcaggcccac
ctggactcagcccagcgtcagcagcgtacagagcaggatctaaacgtggctatccagaat
aaatctgctcagctggaggaggagcagaaaaggtgtgctggcctcagccaagtcaactct
atgctgcgggaacaacttgagcaggccggcactgtcaacattggactaacagagagcctg
tggaaggctcgggaagacattgatttgtgtgataaccgtctgcgcagagagcaagagaca
tgcgcctcccggctctctcgtgaacaagctcgtgtcagagatctgtggcgccaggccgct
tccctgcggagtactttcacccagctaaggactttcactgacaggactatgtctgatatg
cgtggggattgtgtcgctgccagccggcagctgcatgtcgcctgtatgaacttagaggca
agagtaacacaggagagctcctctagtggtacgggtatgtcagcactggagaggcagctg
aaggagaagctcaaagaggccatgcagcttcaggggcgctgggatgcagagaaagtcgaa
cttaactccagggttctggagctgactgacacagtgaaacacctccgcagccagaacagt
gagaaggatgccagcctcgacaccatgcaaaacagtctggacaggatggagacgaggaga
acagaggataaaggagagatggaggtcctccacacagagatgcaagccctccagaagctt
ttatgccatgttcaacagatggttggcggcgaggacgatagcagcgggtttgaaagtgtg
tccttctcacctcttcatggtcggtctcctctgaggaacacaaccctgatggctgtgcag
agtgctctctccaagcaccacaaacaaacacaggacctgcgtggacgtctggatgctgcc
ctggagcaagtgaacacactgcgtgatcatctgcaggagaaagacacagagaggaaagag
ctggagcagaagatccaggatgaacggagggaaagtcaggaggctaaaaaagctctggag
gaaagcctcagagacagcagcagatatcgctgctcaatggagctcatttcaagtgagaag
agcagcctggagaagctgctctcagggctgcagcaggaggtggactcccagcgtgccgag
ctggaggcactgcgaggctcctcactggagctgcagagacagcgggacctcctgaggcag
cagagggaggatctggagatgcagctgacacggcagcgcacggaggcccaaagaggtgag
aggagtcttgaggagctcgaagcaaagcactcagatcttcgtagggagcttgtgacagtg
aaggaggctctaagtcaaatcaccctacagaaggaggtgctggaggatgataaggccagc
ctcgctctggctctcagcaagatggagtcccaaagtgctgcacatgagttagccttcacc
aaactgcagaatcaggaggctgcccttaaagattctctggcaaaaatggctgccctgagc
gaaggcttagctaaggacaaggtggaactcaatcgtattgtgctgcagtcagagggtgag
aaggcagagtttgctgagcgtagacgggaagccgaagtggagcgggcagtggcccgggag
gagacaacaaggctccagcaggagatgatgaatctgcttgtcgagaaacaagcccttgag
agctcccacagccacttgcaggatctctgccaaagcctggaagcagagttgagcctgctg
cagagggagaacgctcagactctggagcagcactcccaggtcaataagcagatgcagagt
gtgtcagaagagctgtgtgcgtgcaggaaggagcttgagacacagaccacagccctaaag
agagctacccatgacagggaggagctggccaaggacaaggctgctctggatgtcaagcta
aactctgttgaccgaaaggcctgtggactcacgcaagagctggttgcacttagagcagag
aaggagtccctggagacggtgctgtttgagagccaggagctggcctcgtctctggaggcc
gagcgcaccaggatggagggggagaggcgcagcttgctcctggctaacgaggccttgacg
cgtgacggtgctcggatgcgggcggatgctgaacgtcaggtggttctagcagcacaagag
catagtaagttggaggagaagctggtccaggtggagaggaatgccctgcagaccttaaac
aacaaagagcaaattcatagagagcagctcgaagcagaacgacaacaaatggaacagcag
cgtgcagagctgacacttaagcgtgagcaggctgaggagcagctgcgtagacagtgtgag
gaggtgcgtgtgcgcagccagaaagagctgcagcaggtgcaagaggagcaggccaggctg
cagcaggacttcaaccaaagcctcctgcaggctgagagtgaaaagcagcaggctttgtcc
cagaaggaggcagagaaggttgaactcacggagaagctagcagcactgcagcaggacctg
gccaccgcaggcatggagcttgagctgatgcagagggaggcacttagcaaacaggaacag
gataggaatgtgatggatgtccttcagtcagagctgcaaggcttgcggactcagtttgaa
gagtctttgaactccaatgagaatgctaaaaagagtctaactgagcaggttagagagttg
acacaacagacagaacatacacaacaggagttagagggccttcgtcggcagctgcaggag
acagaggatggactcattaaagggaaaactgagctgattgaggctcacagagagctccag
gagtgtgcacagcagcgggacacgcaacgaaaagaagccctggacctgagaaggctcctg
ggggatgagaccagagagaaggagaccatccaagcctctaaccaggagctgagagtttta
atcaagagagccgagtgtgacaacagcagcttgagaagatctctggaggagaaggagcag
aaagtggtcgtcttagaggaatgtagaacctcattgcaccaagaggcgatgtctttacgg
agcagcatgagagagctggagaagtctcgcctgcaggcacgcagagaactgcaggagctg
cgcagacaggtaaaggtcctcgagggagagaacagtcgacagaaacaggaactgcgggag
ctgcaggcccgggtgtgtcaggaggagcagaaggaggaggaagcacgttgcgaggctttt
actctcaagcagagagtgttggagtgcgaggctggcagagaggcagcgctgaatgaggtt
gcaggtctccagcgtcgtgtggtagaactggagacagtggagcataaaacccaagatctc
ctgcaggaaagggaggcttatcagcagcagtgtgaacagaagcacagagaaatcacagcc
cagctggaggaagcactagaggacgcccagatccaggtgaaggaactctctgctcaggtt
ggcctcgctgaaaggaaggtccaaggcctggaagagcagctgtgcctgagtgatgccaaa
cgcagggagctggagctcaagttgtcggggttgtattcaactctgcgccacactgtttgc
accggccatacacggcttttaggcaaccctgcatcccgtaaacggtctccctccccttgg
agaaaccaccatgtgaaggatgaagacatggacttggagtcagtgcacgcagctctgcgg
gaatttcagcaggaactcagggacacacacagagaaagggatgaagccaaggctcagata
gttagtgtaagtcggcagctgaaagagcttgaaggcagccaagatatgtcagccacccag
ctgcttcagctacagaaatccttgaagcatgcagagcaggggaaaagagaaatggcggaa
cgtttgcacgaggcgcatacatccctctccatgcaggaagaagcagcacatcgtacagag
ggggaaaagagaagacttgaggaggaggtagcacaattaagggcaagtctgcaagctgct
gcggctgagtccagggcgctgcaggacaagttggagctcttacagggctcagaatctcga
gcaaatatagaacagcagaagcagaaggagtctctggaagcagcagagaccagggcgagc
cgtctggagctctcccaccgcacccttgaaggtgagctacagagggcccagctcagggca
gcagagctggatgcagaggccggggcgctgcaggagagactgacggagctaaggaggaag
ctgggtgagagcgaggacaggtgtgcagcgcttagggtcagtgaggagaggttggcaacg
gcacttgctcgagctgagcagcatgagagccagctgagagaacagatccacaagttgtca
aacaccctgagtgacaacaggagcagcagtggagcccttcaggagcaggtcacccagctg
cagagggctctgactgccagtgagcaggaccgaaggctgctgcaggaacgcctggataaa
acacgagatgctctttcagagagtaagaggctgagccacaaactaacagagcaagtccag
aaccttcaaagaacacaagaggacttagagcttaaaaactgtgagctggagaaacataac
agaaccctgaaggagagcagaaaacaacagcacgaagctgaagtgcaggcccaggtgagc
tcccagcagctggagcgagagaaggaggacctccgagacaaagtcaccaatcttcagaag
tctttgcaaaagctacagagtgagagagcggagatggagagggtgctgacacgcctcggg
aaagacaagtcagcactcagaaagacactggagaaggtggagatggagaggctgaggggg
gaggaggaggctgcggcgtccgcaggcagagagaaggagcagttgggacagagggtccga
agtctggaggtgcagctggctgaaaaacaggaggaggtgcagactgtgcaggcccagatc
tccctgttggagcactctcatgcacagcgccttctagaggtgacagcccgccatcaccag
gagctggacttagagacagaccgtctgagagacagtcagctccaagcagagcaggctctg
gagaccagggagaaggctcatcgccagagggtcagatgcctggaggaacaggtgctgacg
ctgaaagagcagctagatcaggagacgagaagacgacaggcctatttcaatcagatgcta
caacctggtgtgtag
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integrated database retrieval system
