Semicossyphus pulcher (California sheephead): 138608187
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Entry
138608187 CDS
T10596
Symbol
hdac6
Name
(RefSeq) histone deacetylase 6 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spul01009
]
138608187 (hdac6)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spul03019
]
138608187 (hdac6)
04131 Membrane trafficking [BR:
spul04131
]
138608187 (hdac6)
03036 Chromosome and associated proteins [BR:
spul03036
]
138608187 (hdac6)
Enzymes [BR:
spul01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
138608187 (hdac6)
Protein phosphatases and associated proteins [BR:
spul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138608187 (hdac6)
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
138608187 (hdac6)
Membrane trafficking [BR:
spul04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
138608187 (hdac6)
Chromosome and associated proteins [BR:
spul03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
138608187 (hdac6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
zf-UBP
Motif
Other DBs
NCBI-GeneID:
138608187
NCBI-ProteinID:
XP_069536808
LinkDB
All DBs
Position
Unknown
AA seq
1101 aa
AA seq
DB search
MPSGSDPPGSGLKSVRRSPRLSPQCSGSKGKEEKKGESSLQEVKRRGRMERSREEDEELN
DRLQTLDLSCRSAASGTGLVYSEIFTHHKNLWEPSHPESPGRVTAIMEELQRQELLSHCV
TLQPREATEEELLLAHTKQYVDLMKSTQTMTEEELHTLSDTYDSVYIHPETFQVSVSAVG
SVLQLVDQVMTSELRNGFAVIRPPGHHAQTNQANGFSVFNNVGIAARYARTTHKVSRVLI
VDWDVHHGQGIQYLFQDNPSVLYFSVHRYEGGSFWPHLPESDSQSVGSRRAEGRNINLPW
NKTGMTDADYITAFQQLLLPVAHEFQPQLVLVSAGFDAAIGDPKGEMCVSPQCFHLLTHM
LMSLAEGRLVLALEGGYNLQSTAEGAAACVRALLGGACPLLTPPTAPSDSALQSLSQTLS
ALYPHWASLQTLEGGPLAEGSVIRATTNEQSTKLSSHAPSVTTTTGLVYDERMMEHVNLW
DRHHPEQPQRIFKIYSKHQQLGLVDRCQRIPVRLATEEELARCHSVQHIHQMKATALMKP
RDLHKLGNEFNSIFINNQSFQCALLAAGGCFSAVESILTGLVSNGVAIVRPPGHHAETDS
PCGFCLFNTAALAARHAQKISQDALRVLILDWDVHHGNGTQHMFEDDDSVLYVSLHRYDN
GTFFPSSVDAAPDRVGVSKGAGFNVNVAWSGGRMGDSDYLAAFHHIIMPIATEFNPGLVL
VSAGFDAARGDPLGGYHVTPEGYAHLTHLLMSLAGGRVLLILEGGYNLSSISDSMAMCTS
VLLGDPPPSLVTPLPPPHHSAVATINQVIRHHAPYWRSLRIHIPESVRASLPSPKHRGKR
SSKGKGRKSDQSGTDRPPLPPAGREDTTTERSLEQLTQGLAGLDISQTSANHTPATSTPV
GGARPKVRLSPEKVTCEVEVKAQSEEVTPEQSQSAESTQAVAVAASESVAPGDESAGRVG
AEPESEGACGWSKSQMSLELTCGGQADTPLYVVDPLPWCPHLDAIKPLPPSGIDVFQSCQ
DCGSDAENWTCLTCYQVLCGRYVNEHMVTHGVVSEHPMVLSFCDLSVWCYLCESYVHNQI
LFEAKNAAHFAKFGEEIPPWS
NT seq
3306 nt
NT seq
+upstream
nt +downstream
nt
atgccatctggatcagatcctccaggatcaggactgaaatcagtcagaagatctcctcgt
ctctctcctcagtgcagcggcagtaaaggaaaggaggagaagaaaggagagagcagcctg
caggaggtgaagaggagaggcaggatggagaggagcagagaggaggacgaggagctgaac
gacagactgcagacgctggatctgtcctgtagatcagcagccagtggaacaggtctggtt
tactctgagatcttcactcatcataagaacctgtgggagcccagtcacccagagagtccg
ggcagagtgaccgccatcatggaggagctgcagagacaggagctgctgtctcactgcgtc
acactgcagcccagagaggcgacagaagaggagctgctgctcgctcacacgaaacagtac
gtcgacctgatgaagtccactcagaccatgaccgaggaggaactacacactctgtctgac
acgtacgactctgtgtacattcatcctgagacgttccaggtgagtgtgtcggcggttggt
tcagtcctccagctggttgatcaggtgatgacctctgaactcaggaatggattcgctgtc
atcagacctccaggtcatcacgctcagaccaaccaggccaacgggttcagtgttttcaac
aatgtggggatcgctgctcgatatgctcgcaccacccacaaagtcagccgggtgctgata
gtggactgggatgttcatcatggtcagggcatccagtacctgttccaggacaaccccagt
gtgctgtactttagtgtccacaggtatgagggcgggtctttctggccacacctcccagag
tctgatagtcaaagtgtcggcagcagacgagctgaaggcagaaacatcaacctgccctgg
aacaagacggggatgacggatgctgattacatcacagcttttcaacaactgctgcttcct
gtagcccacgagtttcagcctcagctggttctggtctctgcaggattcgatgcagcaatc
ggagatccaaagggggagatgtgtgtgagtcctcagtgtttccacctgctcactcacatg
ttgatgagtttggcagaaggtcgactcgttctcgctctcgagggagggtataacctgcag
tcgacagcagagggcgctgcagcctgtgtcagagctctgctgggaggagcttgtcctctg
ctgactccgcccaccgctccgtctgacagcgctctgcagtcgctctctcagacgctgtct
gctctgtatcctcactgggcctctctgcagacgctggagggtggcccattggctgaggga
agtgtcatcagagcaacaaccaatgagcaaagcacaaagctgtccagtcacgccccctct
gttaccacgacaacaggtctggtttatgatgagaggatgatggagcacgtgaacctgtgg
gacagacatcaccccgagcagcctcagagaatctttaagatctactccaaacatcagcag
ctgggattggtcgatcgttgccaacggataccagttcgcttagcaacagaagaggagctg
gccaggtgtcacagtgtgcagcacatacatcagatgaaggccacagcgctgatgaagccc
agagatctgcacaaactgggaaacgagtttaactccatcttcatcaacaaccagagcttc
cagtgtgctctgctggctgctggaggctgcttcagcgctgtggagagcatcctcaccgga
ctggtgagtaatggcgtggccatcgtccgtcctcctggtcatcatgctgagacggactct
ccctgtggcttctgtctcttcaacacggcagcactcgccgctcgtcatgcacagaaaata
tcccaggatgcactgcgagtcctcatcctagactgggacgttcaccatggcaacgggaca
cagcacatgtttgaagacgacgacagcgtcctgtacgtttccctccatcgctatgacaac
gggaccttcttcccgtcgtcagtggacgccgcccccgacagggtgggcgtgtccaaaggg
gcaggatttaacgtcaacgtggcatggagcggagggaggatgggcgactccgactacctt
gctgcctttcatcacatcatcatgccgatcgctaccgagtttaaccccggtctagttctg
gtgtcagccgggttcgatgccgctcggggggatccgctgggaggatatcatgtgaccccc
gagggatacgcccacctgacacacctactgatgtcactggcaggggggcgggtccttctc
atactggagggtggttataatctgtcgtccatctctgactccatggcgatgtgcaccagt
gtgttgctaggagatcctcctccgtctttagtgacacccctcccccctccccatcacagc
gccgtggcaacgatcaaccaggtgatccgacaccatgccccctactggcggtccctgagg
atacacatcccagagtctgtgcgggcatctctgccctccccaaagcaccgtgggaaacgt
agttctaaaggaaaaggcaggaagtcggatcagagcggcacagacagaccacctctgccc
cctgcagggcgggaggacacgacgacggagcgcagtctggagcagctcactcagggattg
gctggtttggacatcagtcagacctcagccaatcacactcctgccacatccactccagtg
ggcggggccaggccgaaggttcgcctcagcccagagaaggtcacctgtgaagttgaagtg
aaggcacagtcagaggaagtgactcctgagcagagccaatcagcagagagcactcaggct
gttgccgtggcagcatcagagtctgttgctcctggagacgagtcagctggtagagtgggg
gcggagccagagtcagagggagcgtgtggttggtcaaagtctcagatgtctctggagctg
acgtgtggaggacaggcggacacccctctgtacgtggtggaccctctgccctggtgtcct
cacctggatgccattaagcccctccccccctcaggcatagatgtcttccagtcatgtcag
gactgcggctctgatgctgagaactggacctgtctcacctgctaccaggtgctctgtggt
cgttatgtgaacgagcacatggtgactcacggcgtggtgtctgagcacccgatggtcctg
agcttctgtgacctgtctgtgtggtgttacctgtgcgagtcgtacgtgcacaaccagatt
ctgtttgaagctaaaaatgctgctcactttgccaagttcggagaggagatccctccatgg
agctga
DBGET
integrated database retrieval system
