Semicossyphus pulcher (California sheephead): 138608191
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Entry
138608191 CDS
T10596
Symbol
hcfc1b
Name
(RefSeq) host cell factor 1b
KO
K14966
host cell factor 1
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03083
Polycomb repressive complex
spul04980
Cobalamin transport and metabolism
spul05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
138608191 (hcfc1b)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
138608191 (hcfc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
138608191 (hcfc1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spul01009
]
138608191 (hcfc1b)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spul03036
]
138608191 (hcfc1b)
03029 Mitochondrial biogenesis [BR:
spul03029
]
138608191 (hcfc1b)
Protein phosphatases and associated proteins [BR:
spul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138608191 (hcfc1b)
Chromosome and associated proteins [BR:
spul03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
138608191 (hcfc1b)
HMT complexes
COMPASS/SET1 complex
138608191 (hcfc1b)
MLL-HCF complex
138608191 (hcfc1b)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
138608191 (hcfc1b)
Mitochondrial biogenesis [BR:
spul03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
138608191 (hcfc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Kelch_HCF
Kelch_KLHDC2_KLHL20_DRC7
Beta-prop_FBX42
Beta-prop_ATRN-LZTR1
Kelch_1
Kelch_2
fn3
Kelch_FKB95
Motif
Other DBs
NCBI-GeneID:
138608191
NCBI-ProteinID:
XP_069536813
LinkDB
All DBs
Position
Unknown
AA seq
1570 aa
AA seq
DB search
MATEPTTPAVLQPRWKRVLGWTGPVPRPRHGHRAVTIKELMVVFGGGNEGIVDELHVYNT
ATNQWFIPAVRGEVPPGCAAYGFVCDGTRLLVFGGMVEYGKYSSDLYELQASRWEWKRLK
AKAPKNGPPPCPRLGHSFSLIGSCCYLFGGLANDSEDPKNNIPRYLNDLYCLELRPGSSV
VGWEIPLTSGQPPPPRESHTAVVTSGCGVNRLIIYGGMSGCRLGDLWVLHIDSLTWSRPT
LSGTAPLPRSLHSATTINNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDTMCW
ETVLMDSLEENVPRARAGHCSVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYLETERPCA
PSRVQLVRANTSSLEVSWGPSQTAETYLLQLQKYDIPATPATSSPASNLVPTATPGASSP
KSPAPIATAPASQPVPLSGLTLLPSPTACVPGSPLAAACRAPAVLKVAAAPGAVGGASIV
TVRQATPKSPVAVTTLPAGVRMVVPAQAGQATPRGGSPQMSGMAALAAAAAATQKIPPST
GATLNVPAGATVVKTVAGLPAKQASVTMVTNPATRILKTAAAQVGGASVVSTPGTPGRPI
ITVHKSGTVTVSQQAQVVTTVVGGVTKTITLVNSPLGAGGGGALIGNLGNLGKMVVQGGA
VTGQTGSSPITQILQTKGPLPAGTVLKLVTSADGKQTTLLSTAQAGAVPTKPNILGVTPA
TTGKPGTTIIKTIPVSALQGGAGANSPFTILTTKMVTTGSAGKIITTVPKITTAGPQGLT
QVVLKGAPGTPGTILRTVPMGGVRLVSPGAVGSKPTVTTLVVKATTGVSSLGTVTGSVST
TSAGGAVSASKASLATPITSLATIATLARQITTATATASGPKQVTLITTPSGAEAQPLVQ
DLPVSIMASPTSEDPGSTTSTTATTTTARGEGGDNAPATVMLVCSNPPCEMHDTGTTNTA
TTAAASMSREPQVSSHQPSASVSLNSGSTCSNPPCETHETGTTNTTTTARAGGLRQVCSN
PPCETHETGTTNTATTAGAGGLRQVCSNPPCETHETGTTNTATTATAQPGGDALQADSTD
PSSDPTPSTASQSRAVTMVTQATPTPGPSIPEISSLVGEGRVESSEAVMAAEEGEEPMQT
DSQGHVMSSTASVLQVHVEGSEAGAQMTSEGGLPQELMSSEGDGGEVVSGTTTLMVTGLT
PDQLAVTTTTDEAVQQATIQAVLQAAGHMGEGLVDQSIPIVLTQQDLAALVQQQLQDVNN
QPEPSGVLTEGLAPADSLNDPAAESNGHELTSSAVTSAVARLASTFGPAPQLTASLAKIQ
TATAHPEVTNGNAAPAGKQSVAVRSSVKDSQWYDVGIIKVTNMVVSHYYIPYGDNMADDD
SGVMPDYSQMRKAELQPGTAYKFRVAGINICGRGAFSEVSAFKTCLPGFPGAPCAIKISK
NLGGAQLTWEPPAVTSGRITEYSVYLAIQSSQAGSAPCSGPAQLAFMRVYCGPSPSCLVQ
SSSLANAHIDHTTKPAIIFRIAARNQKGYGPATQVRWLQESSKEAKPAVKRAGASPDHKP
VGPKKFRTDQ
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccgaacccacgaccccagcggtgctacagccccgctggaagcgcgtcctgggc
tggacaggcccggtgccgcgtccccggcacggacaccgagcagtgaccattaaggagctg
atggtggtgttcggtggagggaacgaggggatcgtggacgaacttcacgtctacaataca
gctactaaccagtggttcatcccagctgttcggggtgaagtccccccaggctgtgctgct
tatggcttcgtgtgtgacgggacgaggctgctggtgtttggagggatggtggagtacggc
aaatacagcagcgacctgtacgagctgcaggcaagtcgctgggagtggaaacgtctgaag
gccaaggctccaaagaatggcccacccccttgcccccgcctcggacacagcttctctctg
attggaagctgctgctacctgtttggaggactggccaatgatagcgaagaccccaaaaac
aacatccccaggtacctgaacgatctgtactgtctggagctgcggccaggctccagtgtg
gttggctgggagatcccgctgacttcaggtcagccgccaccgcccagagagagtcacacc
gccgtggtgacaagcggctgcggagtcaacaggctcatcatctacggaggcatgagcggc
tgcaggctgggagacctgtgggtgctgcacatagattctctgacatggagcagaccaact
ctgagtggaaccgcccccctcccccgcagcctgcactctgccaccaccatcaacaacaag
atgtatgtgtttggaggctgggttccgctggtgatggacgatgtgaaggtggcgactcat
gagaaggagtggaagtgtaccaacacactggcctgcctcaacctggacaccatgtgctgg
gagacggtgctgatggacagtctggaggagaacgtccccagagctcgagcgggtcactgt
agcgtcgccatcaactccagactgtacgtgtggagcggcagagatggctacaggaaggcc
tggaacaaccaggtgtgctgcaaggacctctggtacctggagacagagcgtccctgcgcc
ccctcccgggtgcagctggttcgggcaaacacgtcgtctctggaggtgagctgggggcct
tctcagaccgcagaaacctacctgctgcagctgcagaagtatgacattcctgccacacct
gcaaccagctcacctgcctccaaccttgtccccactgccacacctggagccagctccccc
aagagccccgctccaatcgccacagcaccagccagccagccggtccctctgtctggcttg
acgctgctcccttcccctactgcctgcgtacctgggagcccattggctgctgcttgcaga
gcaccagcggtcctgaaggtggcagctgctccaggtgcagtgggcggagcctccatcgtc
acagtgaggcaggccacgcccaaatctccagtcgctgtgacaacacttcctgcaggtgta
cgtatggtggtacctgctcaggctggtcaggcaacgccaagaggaggcagtcctcagatg
agcggcatggcagcgctggcggcagcggctgcagcgactcagaagatccctccatccact
ggcgcaacgctcaacgtccccgcaggagcgaccgtcgtaaagactgtagccggcctgcct
gccaaacaggcttctgttaccatggtaaccaacccggccactcgtatactaaagactgct
gccgctcaggtgggtggagcctctgtagtctccacccccggcacccctggccgaccaatc
atcacagtgcataaatcgggcacggtgactgtgtcccagcaggctcaggtggtcacaacg
gtggtaggcggagtcacaaagaccatcacactcgttaacagtccactgggtgcgggagga
ggcggggctctgattggtaaccttggtaatcttggcaagatggtggtgcagggtggagct
gtgactggtcagaccgggagcagccccatcacacagatcctgcagacaaagggccccctc
cctgcaggtactgtcctgaagctggtgacctcagcagacgggaagcagacgacgctgctc
agcaccgcgcaggccggagccgtgcccaccaaacccaacatcctgggggtcaccccggca
accaccggcaaaccgggaaccaccatcatcaagaccatcccagtgtctgcactgcagggg
ggggcaggtgctaacagtccattcaccatccttaccaccaagatggtcacgacaggaagt
gccggaaaaatcatcaccaccgtcccgaagatcaccacggcaggcccacagggactcaca
caggtggtgttgaaaggagctccggggacgccaggtacgatacttaggaccgtcccaatg
ggcggagtcagacttgtgtcacctggagctgtcggctccaaacccaccgtcaccacgcta
gtcgtcaaggcaaccacaggtgtgtccagtctggggacagtaactggaagtgtctccacc
acatcagcaggtggagctgtctccgcttccaaagcctccctggccacgcccatcaccagc
ctagcaaccatcgccacgctggccagacagattaccacggcaactgccacagcatcagga
cccaaacaggtgactctcatcacgactccgagcggcgctgaggctcagccgctggtccag
gacctgcccgtctccatcatggcctctcctacttcagaggacccaggaagtactacgagt
actactgctactactacaactgcaaggggggagggtggagacaatgcacctgctacagtg
atgctggtctgttccaacccaccatgtgagatgcacgacactgggacgacgaacaccgcc
acgacagctgccgccagcatgagccgagagccgcaggtgagctcccaccagccttcggct
tctgtcagtctgaactcagggagcacctgctccaatcctccgtgtgagactcacgagaca
ggaaccactaacaccaccaccacggccagggcaggaggactgagacaggtgtgttctaat
ccaccgtgtgagactcatgagactggaaccaccaatactgccaccacagccggagcagga
ggactcagacaggtgtgctccaacccaccctgtgagactcacgagaccgggaccaccaac
actgccaccacagccacagctcagccaggtggagacgctctgcaggcagactccacagac
ccctcctctgaccccactccctccacagcaagccagagcagagctgttaccatggttaca
caggccacacccacccccggaccatccatacctgagatctcctcactggtcggagagggc
agggtggagtcctcggaggcagtgatggcagcagaagagggggaggagcctatgcagact
gacagccaaggacatgtgatgtcatcaacagcatcagtgttacaagttcacgtggagggc
agcgaggcaggcgcacagatgacctcagaaggtggtcttcctcaggagctcatgtcatca
gaaggggacggaggtgaggtcgtctccggcacgacgaccctgatggtgacaggactgacc
ccagatcagctggctgttaccacgacaacagatgaggcggtccagcaggcgacgatacag
gcggtcctacaggcggccggacacatgggggagggtttggtggatcagtccatccccatc
gttctaacccagcaggatctagcagctctggtccagcagcagcttcaggatgtcaacaat
caaccagagcccagcggcgttctcacagagggccttgctccagcagacagcctgaatgac
cccgcagcagagagtaacggacacgagctgacatcatcagctgtgacgagcgctgtggct
cgattggccagtacgtttggccccgcccctcagctgacggccagcctggctaagattcaa
actgccactgcacatcctgaggtgaccaacggcaacgctgctcctgcagggaagcagagc
gtggcggtgaggtcatcagtgaaggacagtcagtggtacgatgtcggtatcatcaaggtg
accaacatggtggtgtcacattactacattccctacggagacaacatggccgatgacgac
tcaggtgtgatgcctgactacagtcagatgaggaaggcggagcttcagccggggacggcg
tataagtttcgtgttgcggggatcaacatctgtggccgtggggcgttctctgaagtgtct
gcctttaaaacatgtctgcctggtttccctggggcaccctgcgccatcaagatcagcaag
aacctgggcggggctcagctcacctgggagcctcctgctgtcacgtcggggaggatcact
gagtactctgtgtacctggccatccagtccagccaggctgggtccgccccctgctctggt
ccagcccagctggccttcatgagggtgtactgtgggcccagcccatcctgcctggtccag
tcctccagcctcgccaacgcacacattgaccacaccaccaagcccgccatcatcttccgc
atcgccgcccgcaatcagaagggctatgggccggccactcaggtcaggtggctccaagag
agcagtaaagaagctaaaccagcagtgaagcgagcgggagcgtctcctgaccataaacct
gtcggaccaaagaagttcagaaccgaccaatag
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