Semicossyphus pulcher (California sheephead): 138608296
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Entry
138608296 CDS
T10596
Symbol
casc3
Name
(RefSeq) protein CASC3
KO
K14323
protein CASC3
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03013
Nucleocytoplasmic transport
spul03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
138608296 (casc3)
03015 mRNA surveillance pathway
138608296 (casc3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spul03019
]
138608296 (casc3)
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
138608296 (casc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
138608296
NCBI-ProteinID:
XP_069536955
LinkDB
All DBs
Position
Unknown
AA seq
776 aa
AA seq
DB search
MADRRRRRRRASQDSEDDDESGSGSDSGRSGSPATKSRGREPDPPEPTAVREEAKSDVES
ECESEDGVGEAVLSDYDSADPEENGSHSEGVEEEEEAEHYSDEEAPAAASEPKPSAADVP
TKEEVQPQEEEAEGEGGGQSKEESKAEEKGNLAGERQSGDGQESTEDPETKAGVKPGQKL
DDDEDRKNPAYIPRKGLFFEHDVRGHAQEEERPKGRNRKLWKDEGRWEHDKFREEEQAPK
SREELIAIYGYDIRNGGGHGDRTFRQRRPRQSTSPSRDKRWRDGGERPVRSWQSGGGGLN
RGGGPPPSSIHPSSTPASSLPLSSAQRGSNTSRPPPFRSRPQHQNQMHLPPQSQYRNNES
NAPQMHPRERQGPKAPSEPTGDRVSRGGRATGGGRGGPSVVVEDVTVSHGGVREEDPSVV
TTAAASQLGGYQSASPRRQQQEQRGSADRSVSGLAAPSASDSAPQSSAQTATNREASPPT
ERPVERKSYSLARRTRSRPADLGSKQTSIEESAAGGNTSSPGIVGGKSWAGADGPSQTGG
GGGGGGGGGLTELDQDVARLSLAGQSWSQSPTSYIRSEMRGLPNPMHLPGGPPQFSSMEE
IGVGSNRAKRYSSQRQRAVPEPAPPMHLGVMEGHYYEPISYQGPIYAHGEGPAPIPPQGM
LVQPEMHLPHPGLHPHQSGGPIANPALYGGPPVSLSPGQPPQQLLPPPFYPPPGVMTFPY
PAMYPSPQGQSQVTYGGVTYYDTMQQQAQPKPSPPRRTSQPVTIKPPPPEVHFASE
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggcggaccggcggcgaaggaggaggcgcgcgtcccaggacagcgaggacgacgacgag
tccggttcgggttcggacagcgggaggtcgggatccccggctaccaagagccgagggaga
gagcccgacccgccggagcccacagcggtccgggaggaggcgaagagcgacgtggagtcc
gagtgtgagagtgaagatggagtaggagaagctgtcctctccgactacgacagtgcagat
ccagaggaaaacggctcccattcagagggagtggaggaagaagaggaggccgagcattac
agcgatgaagaggctccagcagcagcaagcgaacccaaaccctctgcagccgacgtccct
acaaaggaggaggtgcagcctcaagaggaggaggcagagggggagggaggaggacagagt
aaagaggagagtaaggccgaggagaaaggaaacctggccggagagagacagagcggagat
ggacaggagtccacagaggaccctgaaacgaaggcgggagtcaaaccgggtcagaagctc
gatgatgacgaggacagaaagaatccagcctacatcccgaggaagggtctgttcttcgag
cacgacgtgagaggacacgcccaggaagaggagagaccaaaaggtcgtaacaggaagttg
tggaaggacgagggtcgctgggagcacgacaagttcagggaggaggagcaggcaccgaag
agccgcgaggagctcatcgccatctacggttacgacatccgaaacggaggcggccatgga
gaccgaacgttccggcagcgcagacccagacagagcacgtctcccagcagagacaagcgg
tggagagacgggggagagcgaccggtccgatcctggcagagtggaggaggaggtctgaac
cgaggaggaggtcctccaccttcatccatccatccatcctcgacacccgcctcctctctc
cctctctcctctgctcagcgaggcagcaacacctccagaccgcctccctttcgcagcaga
ccccagcaccagaatcagatgcacctcccgcctcagtcccagtacaggaataatgaatca
aacgcaccccagatgcatcccagagagcgacaggggcccaaagctccatctgaacctaca
ggagaccgggtcagcaggggggggcgtgctactggtgggggcagggggggtccgtctgtg
gtcgttgaggatgttacggtcagccacggaggcgtcagggaggaggaccccagtgttgta
acgacagcagcagcatcacagctgggtggttaccagtctgcatcaccacgccgacagcag
caggaacaaagagggagcgctgacagatccgtgtcaggattggctgctccctccgcctct
gactccgccccacagtcgtcggcacagacggcaaccaatcgggaagcctctcctcccacc
gagcggccggtggagcgtaaatcttactcactggctcgcaggactcgctcccggccggca
gacctgggcagcaaacagacgtccatcgaggagtctgcagccggagggaacacctcctcc
cccggcattgtgggaggaaagagctgggcaggggcagatggcccaagtcagacaggagga
ggaggaggaggaggaggaggaggaggactgactgagctggaccaggacgtggctcgactt
agtctggcaggacagagctggagtcaaagcccgacgtcgtacatccgctcagagatgaga
ggcctccccaaccccatgcacctccccggcggcccgcctcagttctccagcatggaggag
attggtgtcggctccaatcgggccaaacgctactcctcccaacgacagagagccgtaccg
gagccggctccacccatgcatctgggggtgatggagggacactactatgagcccatatcg
taccagggaccaatctacgctcacggggaaggccccgcccccatcccaccgcaaggcatg
ctggtccagccggagatgcacctcccccaccccggtctccatccccaccaatcaggcggc
cccatcgctaaccccgccctctatggaggccctcctgtttctctgtcgccagggcaacca
ccacagcagctgctgccaccacctttctaccctccgcctggggtcatgaccttcccgtac
cccgccatgtacccaagtcctcagggtcagtcccaggtgacctacggaggtgtgacgtac
tatgacaccatgcagcagcaggctcagcccaagccttcgccccctcgccgcacgtcccag
cccgtcaccatcaagcccccccctccagaggtgcactttgcctcagagtga
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integrated database retrieval system
