Semicossyphus pulcher (California sheephead): 138608899
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Entry
138608899 CDS
T10596
Symbol
sfpq
Name
(RefSeq) splicing factor, proline- and glutamine-rich isoform X1
KO
K13219
splicing factor, proline- and glutamine-rich
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spul01009
]
138608899 (sfpq)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spul03021
]
138608899 (sfpq)
03041 Spliceosome [BR:
spul03041
]
138608899 (sfpq)
Protein phosphatases and associated proteins [BR:
spul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138608899 (sfpq)
Transcription machinery [BR:
spul03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
138608899 (sfpq)
Spliceosome [BR:
spul03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
138608899 (sfpq)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
NOPS
RRM_7
Motif
Other DBs
NCBI-GeneID:
138608899
NCBI-ProteinID:
XP_069537584
LinkDB
All DBs
Position
Unknown
AA seq
681 aa
AA seq
DB search
MSRFTNNRGGLGMNQFQQRRGGGPGGPMRGGLMGNPHFRNQPYQNQNQNRRGPNNNMNRP
PNHGPQMTAQKPIIPPPSPGPALTMKGPMQQQQKPVEQQQKPAPQQQEQQQQQEKPTTPA
PQVKIESPQAKIQSPPPKPLITSPLPNQANKNQNPDQQLKSPGENANGQQQKQPPHPSPK
SGPHQGQRTGPQQGQRTGPHQGQRTGPHQGQRSGPYQGQRTGPHQGQRTGPQQGQRTGPL
GMRGKLERDEAEKRPSNNDAAVGEEGQTGEFKATLSMLLKPGEKTYTQRCRLFIGNLPND
LSEEDFKKLFAKYGEPSEVFINKSKGFGFIRLESRALAEIAKAELDDIPMKGRPLRVRFA
THSAALSVKNLSPFVSNELLEEAFSQFGMVERAIVIVDDRGRSTGKGIVEFASKPAARKA
LDRCNEGVFLLTTSPRPVVVEPLEQFDDEDGLPEKLAQKNPRYQGEREEPPRFARPGTFE
FEYSKRWKSLDEMEKQQRQQVEKNMREAREKLESEMEDAYHEHQANLLRQDLLRRQEELR
RMEELHSQEMQKRKEMQLRQEEERRRREEEMLRKREMEEQMRRQREENYRMGNFMDRDRE
MRMNSGGSMGMGDMSFGAANQKFPMGGMGQQGMGASPGGLMGNEMRNERFAQGGPRGMGP
GNAAYGRVREEFDGPTKKPRF
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgatttactaataatcgcggtggccttgggatgaatcagttccaacaacgcaga
ggtggtgggcccggcggcccgatgcgaggggggctaatgggaaaccctcatttcagaaac
caaccttaccagaatcaaaaccaaaaccggaggggaccaaataataacatgaacaggccg
cctaatcatggaccacagatgactgcccagaaaccgatcatcccaccaccgagtcccgga
ccggctcttacgatgaaaggcccgatgcagcagcagcagaaacccgtggaacaacagcag
aaaccggcaccgcaacagcaggagcagcaacaacaacaagaaaaaccgaccacccctgct
cctcaggtgaagattgaatctcctcaggcgaagattcaatcaccaccgccgaaaccactc
attacatcccctctacctaaccaagcaaacaagaatcagaacccggatcagcaactgaag
tccccgggagaaaatgctaacggacagcagcagaagcagcctccacacccgagcccgaaa
tcagggccacatcaaggccagagaacaggaccacagcagggccagagaacaggaccacac
caaggccagagaacagggccacaccaaggccagaggtccgggccataccaaggccagagg
acaggaccacatcaaggccagagaacaggccctcaacaaggccagaggacggggccactt
gggatgaggggaaaactggaacgagatgaggcggagaagaggcctagcaacaacgacgca
gccgttggagaggagggccagacaggggagttcaaggcaacactgtccatgctactgaaa
cctggtgagaagacgtacacacagcgatgccgactgtttatcggcaacctgcccaacgac
ctctcagaggaagatttcaagaagctgtttgcaaagtacggagaacccagcgaagtcttc
atcaacaaaagcaaaggctttggcttcatccgactggagtccagagcacttgcagaaata
gcaaaagctgagttggatgacataccgatgaagggcagacccctgcgtgtccgatttgcc
actcactctgcagctttgtctgtgaagaacctgtcaccgtttgtttccaatgagctcctg
gaagaagccttctcacagtttggaatggtcgagagggccattgtcattgtagatgaccgt
gggcgctccacaggcaagggtattgtagagtttgcctccaaacctgctgccagaaaggcc
cttgatcggtgcaatgagggcgtctttctgctcaccacgtctcctcggcctgttgttgtc
gagcctcttgagcagtttgatgatgaagatggtctcccagagaaattggcacagaagaac
cccagatatcaaggggagagagaggaacctcctcgtttcgcacgtcccggcacttttgaa
tttgagtactccaagcgctggaagtccctggatgaaatggagaagcagcagaggcagcag
gtagagaagaacatgcgcgaggctcgtgagaagctggagagtgagatggaggatgcttac
catgagcaccaggccaacctgctccgtcaagatctgctgaggcgacaggaggaactgagg
cgcatggaggagttgcacagtcaggagatgcaaaagaggaaggagatgcagctcagacaa
gaagaagagcgtcgcaggcgggaggaggagatgcttcgcaagagggagatggaagagcag
atgcggcgccagcgtgaggaaaactacaggatgggcaacttcatggatagggatagggaa
atgagaatgaactccggtggatcaatgggcatgggtgatatgtcctttggtgcagccaac
caaaagttccctatgggtggaatgggacagcagggaatgggagcatctccaggcggcctg
atgggcaacgaaatgcgcaatgagcgctttgcccagggtggtcctaggggaatgggtcct
ggtaatgccgcgtacggcagagtccgtgaggagtttgatggtccaactaagaagccccgt
ttttaa
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