Semicossyphus pulcher (California sheephead): 138609039
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Entry
138609039 CDS
T10596
Symbol
vars2
Name
(RefSeq) valine--tRNA ligase, mitochondrial
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
138609039 (vars2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
spul01007
]
138609039 (vars2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spul03016
]
138609039 (vars2)
Enzymes [BR:
spul01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
138609039 (vars2)
Amino acid related enzymes [BR:
spul01007
]
Aminoacyl-tRNA synthetase
Class I (U)
138609039 (vars2)
Transfer RNA biogenesis [BR:
spul03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
138609039 (vars2)
Prokaryotic type
138609039 (vars2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
Parathyroid
Motif
Other DBs
NCBI-GeneID:
138609039
NCBI-ProteinID:
XP_069537745
LinkDB
All DBs
Position
Unknown
AA seq
1082 aa
AA seq
DB search
MWRAGCVLSLRLIGRGAARLCSSHPPKPSSYSSSSSHSSTRPKAEKQKRRREKEEAILSG
QHTAAEDKAVRWSEKQKIVYSAPTPPGTKKDTSLPFPSAYSPDYVESSWYQWWEKEGLFR
PEQHETLPQAVDRTFSLCIPPPNVTGTLHVGHALTVAVEDALVRWRRMQGHRVLWVPGCD
HAGIATQSVVERKLLRERGKSRKDFSRREFLQEMWRWKNEKGDEIYQQLRRLGASLDWSR
ACFTLDPSFSTAVTEAFVRLCDSGLIYRSEGLVNWSCALESAISDIEVDSRELSGQTLLS
VPGYENQVEFGTMVTFAYPLEADDGEVSVSTTRPETMLGDVAVAVHPDDPRYQAVQGKQV
RHPFSDRLLPIITDSEVDMNLGTGAVKVTPAHDHADFLLSQRHSLPRLTVMAGDGTMTPP
CGHWLQGVKRFDARRLVVDALMEKKLFRGKKSHAMTLPVCSRSGDVIEPLLKKQWFVRCD
EMAKEAVQAVEDGRLQIIPHFHSKTWKSWLSNISDWCVSRQLWWGHQIPAYHVQLPDSAD
GEQEERWVWGRSEDEARQRAAVKYGAKPEDMTLTQDPDVLDTWFSSGLFPFAMLGWPEQT
PDLQRFYPNSILETGSDLIFFWVARMVMLGTELTGQLPFRQVLLHSLVRDKHGRKMSKSL
GNVIDPLDVIHGVSLERLEEKVKEGNLDPREQLVAMEAQRKDFPGGFPQCGTDALRLALC
SHRMQGEPISLSVSQVLSCRHFCNKMWQTLRFTLGVLEKDGAAVGTLEETRPVSSVDRWI
CSRLYSTVLQCEQAFESYELHAVTSALHAFWVQSLCDVYLECVKPLVALRDDGPVVLTHS
EDRLRSRRAAVSVLYHCVSSSLALLSPFMPFITEELWQRLQPFRAGAARHSSLSLQPYPR
SDQLAHWFFPEEERDFLLVQEVIREARSLRAQCGLTKERPDMWAVCSPSQAQVLLHFDSA
VRTLSRISSLHITCPDATDSPPSVSSAAPPAGSLVSVVDHTCQLHLHVQSGLRADRQLLQ
LSQRRDKLAPKLEEMLSRVQAADYLTKVPAHVRQRTSTKISALQEELRTLEEQLKALQET
TE
NT seq
3249 nt
NT seq
+upstream
nt +downstream
nt
atgtggagggcaggttgtgtcctgagtttgaggctgataggaagaggagctgccagactc
tgttcaagccacccaccaaaaccttcctcctattcctcctcttcatctcattcctctaca
cggcccaaagctgagaaacagaagcggagaagagagaaggaggaggccatactgtcaggt
caacacactgctgctgaagataaagcagtgaggtggagtgagaagcagaagatcgtttac
tctgctccaactcctcctgggacaaagaaagacaccagcttgccgttcccctccgcctac
agtccagattacgtggagtccagctggtatcagtggtgggagaaggagggactcttcagg
ccagagcaacatgagacgttacctcaggcggtggatcggaccttctctctgtgtatccct
cctcccaacgtgacggggactctgcacgtcggccacgcgctcactgtggctgtggaggac
gctctggtccgatggaggaggatgcagggccacagagttctgtgggtccctggatgtgac
cacgcaggtatcgcaacgcagagcgtggtggagaggaagctgctgagggagcgagggaag
agcaggaaggacttcagcaggcgggagttcctgcaggagatgtggagatggaagaacgag
aaaggagacgagatctaccagcagctgaggagactcggagcgtctctggactggagcaga
gcctgtttcactctggatccaagtttcagcacagcggtgaccgaagccttcgtccgcctc
tgtgactctggtctcatttatcgctctgagggcctggtgaactggagctgtgctctggag
tcggccatctctgacatcgaggtggactctcgggagctgtctggacagaccctgctgtct
gttcctggatatgagaaccaggtggagtttgggacgatggtgacctttgcttatcctctg
gaggctgacgatggagaggtgtctgtgtccaccacccgtcctgagaccatgctgggagac
gtggctgtcgctgttcaccctgatgatcccagatatcaggctgttcaggggaagcaggtc
agacacccgttcagcgacagactgctgcccatcatcaccgactctgaggtggacatgaac
ctgggaacaggtgcggtgaaggtgactcctgctcacgaccacgctgacttcctgctgtct
cagagacactcgctgcctcgcctcactgtgatggcaggagacggcaccatgacgcccccc
tgtggacactggctgcagggagtgaagcgctttgatgccaggcggctggttgttgacgct
ctgatggagaagaagctgttcagagggaagaagagccacgccatgactttacctgtctgc
agccgctcaggagacgtcatcgaacctctgctgaagaagcagtggttcgtccgctgtgac
gagatggctaaagaagccgtacaggccgtggaggacggacggctgcaaatcatccctcac
ttccacagcaagacgtggaagagctggctgtccaacatcagtgattggtgcgtgtccagg
cagctgtggtggggtcatcagatccccgcgtaccacgtgcagcttcctgattctgctgac
ggagaacaggaggagcggtgggtgtggggacgcagcgaggacgaggcccgacagagagct
gctgtcaaatatggagcaaagcctgaagacatgactctgactcaggacccggacgtcctg
gacacctggttctcctcggggctgtttcccttcgccatgctcggctggcctgagcagacc
cctgacctccagcgcttctaccccaactccatcctggagacaggaagtgacctcatcttc
ttctgggtggcgaggatggtgatgctgggcaccgagctgacgggacagctgcccttcaga
caggttctgcttcactctctggtcagagacaaacacggcaggaagatgagcaagtctctg
ggaaacgtcatcgacccgttagacgtcattcacggagtctctctggagagacttgaagag
aaagtgaaggaggggaacctggacccccgggagcagctggttgccatggaagcgcagagg
aaagacttccccggggggttccctcagtgtgggactgacgctctgaggttggcgctgtgc
tctcacaggatgcagggtgaacccatcagcctgtccgtctctcaggtgctgagctgcaga
cacttctgtaataagatgtggcagacgctgagattcacactgggagtactggagaaggac
ggggcagcggtgggaacactggaggagacgcgtcccgtgagcagcgtggaccgctggatc
tgctccaggctctacagcacggtgctgcagtgtgagcaggcctttgaatcctacgagctg
cacgcggtcacgtctgctctgcacgccttctgggtccaaagcctgtgtgacgtttacctg
gagtgtgtgaagcctctcgtggctctgcgggacgatggtccggtggtcctcacacactca
gaggacaggctcaggtccaggcgggcggcggtcagcgtcctgtatcactgcgtgtcctcg
tctctggccctgctgtcccccttcatgcccttcatcacggaggagctgtggcagaggctg
cagccgttcagagccggagctgcccgtcacagcagcctgagcctacagccgtacccccgc
tcggatcagctggctcactggtttttccctgaagaggagagagatttcctgctggtgcag
gaagtgatccgagaggcccgatcactgcgagctcagtgtggactgaccaaagagagacct
gacatgtgggccgtgtgttcacccagccaggctcaggtcctcctccactttgactcagct
gttaggactttaagccggatctccagcctccacattacctgtcctgatgccacagacagc
cccccctctgtcagctcagccgctccacctgcaggcagcctggtcagtgtggtggaccac
acctgtcagctgcacctccacgttcagagcgggctgagggctgacaggcagctgctgcag
ctctctcagcgcagagacaaactggctccaaagctggaggagatgctgagcagagttcag
gctgcagactacctgaccaaggtccctgctcacgtcaggcagaggacgagcacaaagatt
tccgccctgcaggaggagctgaggactttagaggagcagctgaaagccctgcaggagacc
acagagtga
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