Semicossyphus pulcher (California sheephead): 138609193
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Entry
138609193 CDS
T10596
Name
(RefSeq) tenascin-like
KO
K06252
tenascin
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04510
Focal adhesion
spul04512
ECM-receptor interaction
spul04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138609193
04518 Integrin signaling
138609193
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138609193
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
spul00536
]
138609193
Glycosaminoglycan binding proteins [BR:
spul00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
138609193
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_TEN
EGF_Teneurin
EGF_Tenascin
EGF_2
Fibrinogen_C
fn3
hEGF
EGF
DUF7949
EGF_PEAR1L
FN3_Tor_3rd
Fn3_Dep-1_3rd
FN3_DSCAM-DSCAML_C
EGF_integrin
Fn3_Dep-1_2nd
Big_5
EGF_laminin
RGS12_usC
Ig_J
Motif
Other DBs
NCBI-GeneID:
138609193
NCBI-ProteinID:
XP_069537932
LinkDB
All DBs
Position
Unknown
AA seq
1380 aa
AA seq
DB search
MSPSLLLVLLLASPALLTPLTSQELEVRGQSTPRDTKQDSIKVVISEGCSTQGDSSDVSQ
GGKEIDLTPGSPLVLTHKIKLVPSGSGSGSGSCGCEGDFAALRERLERLEREVSALREKC
GGAEGGCCTSKESKGAGCLIKPDVGQCPNECSDQGRCDDGMCVCFPGFSGPDCSASNCPG
NCNDKGQCVNGQCVCDPGFTGPDCSQEGCPDNCNNRGRCVNGQCVCDSGFTGPSCSDESC
PGNCKNRGRCVNGQCVCNRGFTGRDCSKKACPDNCNNHGRCVNGKCVCNSGFTGADCSET
ACPGNCNNKGRCIDGECVCDEGYGGPDCSEIICPNDCYDRGRCVDGKCVCDSGFTGEDCS
ETSCPGNCNNRGRCVNGQCVCNDGFTGEDCSENSCPGNCNNRGRCVNGQCVCNDGFTGED
CSENSCPGNCNNRGRCVNGQCVCNDGFTGEDCSENSCPGNCNNRGRCVNGQCVCDDGFTG
EDCSENSCPGNCNNRGRCVNGQCVCDDGFTGEDCSENSCPGNCNNRGRCVNGQCVCNDGF
TGEDCSEKSCPGNCNNRGRCVNGQCVCDDGFTGEDCSDISCPGNCNNRGRCVNGQCVCDD
GFTGEDCSEKSCPGNCNNRGRCVNGQCVCNDGFRGEDCSEKACPNNCSKRGKCVNGKCVC
DVGFAGPDCAAKGCPNNCNNKGRCVKGRCVCRRGFTGPDCSQCEEGMTGPNCDTAMSGVS
QLSARDVTETSVTLIWTPPPVQYETYYITFTSQKESDQQISVQVEGSLTTFTQTGLAAGQ
EYTVTITGEIDGRRGAESSAEFMTLISGPSNLQVVKTTTTSAVVQWEQSQGEIDRYRLTI
TPNDGIGRAQDMTVPAGQDSAHIQQLEAGRLYDITVVAEKGTSRSDPASTQVTPGPEPPT
DIVFSELTENSLTVSWTKPRTPISGFKVTYTHKEEGEPVSVSVDSGDSTLGLSQLSPGST
YEVSIVSVLGLDESDPLKDSVTTLPDPPTDLRAVNVTDSTALLLWRPALAAVDKYAIVYG
SGTDSELRISVSGNAAEQHLSGLEGSTTYTVTITSQLGSQESSEATTSFTTTGGSRAGPR
DLQASDVTPRTALLQWTPPSNPVGSYRLTYQTEDGDMKELIVDGTLTEYNLIRLYPGSKY
TVKLQAEMGGQYTAAVSTEFTTGTLRFPFPTDCSEELLNGIRTSGEVEIFPRGKHGTSMM
VYCDMETDGGGWTVFQRRKDGSVDFFKGWKDYVKGFGDPSGEFWLGLDSLHNLTTMSRMT
LRVDLRDKDESVFAKYTTFEVAKRNYRLTVGGYSGTAGDSLTYHNNRLFSTKDRDPQPFI
TRCAMSYRGGWWYKNCHEANLNGLYGIDVKHQGIIWTSWKGKEHSIPFTEMKMRPAAFRG
NT seq
4143 nt
NT seq
+upstream
nt +downstream
nt
atgtctccctccctcctcctcgtcctcctcttggcctcgcccgccctcctgaccccatta
acctcccaggagttagaggtcagaggtcaaagcacacccagggacaccaagcaggactcc
atcaaggtggtgatctcagagggctgcagtactcagggggattcatctgatgtcagccag
ggaggtaaagaaatcgacctgacccccggctcccctctggtcctgacccataagatcaaa
ctggttccgtcgggttctggttcggggtccgggtcttgtggatgtgagggggacttcgct
gccctgcgggagcgtctggagaggctggagagggaggtgtcagccctcagggagaaatgt
ggaggagctgagggaggctgctgcacctccaaggagagcaaaggtgcaggttgcctcatc
aaaccagacgttggccagtgtcccaacgagtgcagtgatcagggtcgctgcgatgacggc
atgtgcgtctgcttccctggtttcagtgggccggactgcagcgcgtccaactgtcccgga
aactgcaacgacaagggacagtgtgtgaacggtcagtgtgtgtgcgaccctggttttaca
ggtcccgactgctcgcaggaaggttgccccgacaactgtaacaacagggggcgctgtgtc
aacggacagtgtgtgtgcgacagcggcttcaccggccccagttgctcagatgaatcctgt
cctggaaattgcaaaaacagggggcgctgtgttaatggacagtgcgtctgtaatcgtgga
ttcaccggacgagattgctccaaaaaggcctgtccggataactgcaacaaccatggtagg
tgtgtgaacggtaaatgtgtatgcaacagcggcttcaccggtgcagactgctctgagact
gcctgtcctggaaactgcaacaacaaggggcgctgtatagacggagagtgcgtttgcgat
gagggatacggcgggccggattgctcggaaataatctgccctaatgactgctatgaccgc
ggacggtgtgttgatggtaaatgtgtgtgtgacagcggcttcaccggcgaagactgctct
gagacctcctgcccaggaaactgcaacaacagggggcgctgtgttaatggacagtgtgtt
tgcaatgatggattcacgggtgaagactgctctgagaactcctgcccaggaaactgcaac
aacagggggcgctgtgttaatggacagtgtgtttgcaatgatggattcacaggtgaagac
tgctctgagaactcctgcccaggaaactgcaacaacagggggcgctgtgttaatggacag
tgtgtttgcaatgatggattcacaggtgaagactgctctgagaactcctgcccaggaaac
tgcaacaacagggggcgctgtgttaatggacagtgtgtttgtgatgatggattcacaggt
gaagactgctctgagaactcctgcccaggaaactgcaacaacagggggcgctgtgttaat
ggacagtgtgtttgtgatgatggattcacaggtgaagactgctctgagaactcctgccca
ggaaactgcaacaacagggggcgctgtgttaatggacagtgtgtttgtaacgatggattc
acaggtgaagactgctctgagaaatcctgcccaggaaactgcaacaacagggggcgctgt
gttaatggacagtgtgtttgtgatgatggattcaccggagaagactgctctgacatctcc
tgcccaggaaactgcaacaacagggggcgctgtgttaatggacagtgtgtttgcgatgat
ggattcaccggtgaagactgctctgagaaatcctgcccaggaaactgcaacaacaggggg
cgctgtgttaatggacagtgtgtttgtaacgatggattcagaggtgaagactgctctgag
aaagcttgtccaaacaactgcagcaaacgcgggaaatgcgtgaatgggaagtgtgtttgt
gacgtgggctttgcagggccggactgcgccgccaaaggttgtccaaataactgcaacaac
aaaggaaggtgcgtcaaagggaggtgtgtctgccgccgtgggttcaccggaccagactgc
agccagtgtgaggaggggatgaccggacccaactgtgatacagccatgtccggcgtctct
cagctgagcgctcgtgatgtcacagagacgtccgtcactctgatctggactccgcctccc
gtccagtacgagacctactacatcaccttcaccagccagaaggagagtgaccagcagatc
agcgtgcaggtggagggcagcctgaccaccttcacccagacggggctggcagccggtcag
gagtacaccgtcaccatcacaggagagatcgacggcaggaggggggccgagagctccgct
gaattcatgaccctcatctctggtccgtccaacctccaagtcgtcaagacgaccaccacg
tctgcagtggtccagtgggagcagtcccagggtgagatcgacaggtaccgtttgactatc
acaccaaacgacggaatagggagggctcaggatatgactgtcccagctggccaagactcc
gcccacatccagcagctggaggcggggcgtttgtatgacatcacagttgtggcggagaag
ggaacgagtcggagtgatccagcaagcacccaggttactccaggcccagagcctcccacc
gacatagtcttcagtgagttgacggaaaactctctgacggtgtcgtggaccaaacctagg
actcccatcagtggcttcaaggtcacctacacccacaaggaggaaggtgagccggtgtca
gtgtctgtggactcaggcgactctacactaggcctatcacagctctcacctggctctacc
tacgaggtcagcatcgtctccgtgcttggactggatgagagcgatccactaaaagactca
gtcacaactctccccgaccccccgacagacctccgagccgttaacgtcacagacagcaca
gccctgttactgtggcgaccagcgttggccgccgttgataaatacgccatcgtttacggc
tctgggacggattcagagttgaggatctcggtatctggaaacgcagcagagcagcacctg
agcggtctggaaggatccaccacctacaccgtcaccataaccagccagctgggcagccag
gagagctcagaggccaccaccagcttcaccaccaccggaggctcgagggcagggccacgt
gacctccaggccagcgatgtgacccctcgcacggctctgctgcagtggacaccaccttca
aaccccgtgggcagctacaggctgacctatcagaccgaagatggggacatgaaggagctg
attgtggacgggacgttgacggagtacaacctgatcagactttaccctggatccaagtac
acggttaagctccaggcggagatgggaggacaatacactgctgccgtctccaccgagttc
accaccggcaccctgaggttccccttccccacagactgctctgaggagctgctgaacggc
atccggacgtcaggcgaggtggagattttccctcgggggaaacacgggacatcgatgatg
gtttactgcgacatggagacggacggaggaggctggacggtcttccagaggaggaaggac
ggctccgtggatttcttcaaaggctggaaggattacgtgaaaggatttggggatccgagt
ggagagttctggctcggcctcgacagcctccacaacctgaccacgatgagcaggatgact
ctgcgcgtcgacctgcgcgacaaagacgagtcggtgtttgctaaatacacgacgtttgag
gtggcgaagaggaactacaggctgactgtgggcggctacagcggcactgcaggcgactct
ctcacatatcacaacaaccggctgttctccaccaaagaccgcgacccgcagccgttcatc
acccgctgcgccatgtcgtaccgaggaggctggtggtacaagaactgtcacgaggccaac
ctcaacggcctctacggcatcgacgtcaaacaccagggaattatctggacctcctggaaa
ggaaaagagcactccatcccgttcaccgagatgaagatgagaccagcagccttcagagga
tga
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integrated database retrieval system
