Semicossyphus pulcher (California sheephead): 138609540
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Entry
138609540 CDS
T10596
Symbol
col9a2
Name
(RefSeq) collagen alpha-2(IX) chain
KO
K08131
collagen type IX alpha
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04510
Focal adhesion
spul04512
ECM-receptor interaction
spul04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138609540 (col9a2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
138609540 (col9a2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
138609540 (col9a2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
spul00535
]
138609540 (col9a2)
Proteoglycans [BR:
spul00535
]
Extracellular matrix (ECM) proteoglycans
Others
138609540 (col9a2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
138609540
NCBI-ProteinID:
XP_069538270
LinkDB
All DBs
Position
Unknown
AA seq
691 aa
AA seq
DB search
MAALSALLKTWVILQTLCLALAQVRGPPGPQGQPGLPGPSGTPGSDGIDGDKGPPGPPGS
PGQKGEPGEPGPDGAAGENGIDGLIGAKGDRGPVGSPGPKGQAGPSGEPGAPGPGLPGLA
GAAGPVGLPGEIGQNGPKGVLGSPGPPGLPGPPGKPGPPGKFIGGEEGSAEFQCPLNCPS
GPKGPQGLQGVKGHKGRAGVLGEPGSIGKTGTKGEVGISGEQGIPGPPGPMGLRGYPGMM
GPKGEAGPRGYKGINGPVGIPGPPGEEGPQGPPGEAGDKGDKGGRGIQGPQGAVGKKGEN
GLPGIDGKDGTPGIPGIKGGPGQAGMPGPPGPQGAAGLPGSPGSKGGAGAKGEPGPRGHS
GMQGAPGPLGEPGLPGEAGMEGVPGPKGDRGQRGEVGPQGVVGKPGNKGERGPIGVPGAQ
GLSGTKGDKGFQGKFGSKGDIGDPGVEGLAGEKGEKGLSGEPGPKGQQGISGDSGHNGPT
GDPGKPGDQGPAGLPGPRGLNGERGVPGMPGIQGSSGRDASDQHIIEVVLKMLQERLAAV
AVSAKRAVLGGAGVMGPPGPPGPPGATGPQGPHGLPGARGIPGIFGAAGQIGNTGLKGKR
GAKGDRGDPGKPHPGLPGPPGIQGPPGVDGVARDGRHGERGPEGAAGEAGRPGKAGSQGL
PGYCEAAMCLAASAYTSPRLQEAGTIKGPNV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggctgctctctctgccttgctgaagacctgggtgatactgcagaccctgtgcctggct
ctggcccaagtgaggggtccacctggacctcagggccagcccggcctacccggcccctcc
ggcacccctgggtcagacggcatcgatggagataaaggacctcctgggccccctgggtct
ccaggacaaaagggagagccaggagagccaggtcctgatggagctgcaggagagaacggc
attgatggtttgattggcgcaaagggggatcgaggtcctgttgggagtcccggccctaag
ggtcaagctggaccgagtggtgaacccggagctcctggacccggccttccaggactggct
ggcgctgcaggacccgttggccttccaggtgaaattggacaaaatggacctaagggtgta
ttgggatcacccggaccccctggccttcctggacctcctggcaagcctggtcctccaggg
aaattcatcggtggagaggaagggagtgcagagtttcagtgtcctcttaactgtccatca
ggacctaaaggcccccagggacttcagggagtaaaaggacacaaaggacgtgccggtgtt
ctcggagagcctggtagcataggaaaaacgggtaccaagggtgaagtgggcatctctggg
gaacagggtatcccaggacctccgggtccaatgggtctgaggggttatcccggaatgatg
ggtcctaaaggggaagcagggcctcgtggctacaagggcatcaacggacctgtaggaatt
cctgggcctcctggtgaggagggacctcagggaccacctggagaggcaggagacaaggga
gacaaaggcggccgaggtatccagggcccacagggcgcggttggcaagaagggagagaat
ggtctgccaggtattgacgggaaggatggcacacctggtattcctggaatcaagggcggc
cccggccaggctgggatgccgggtcctccaggtcctcagggagcagcgggattgcctggc
agccctggctctaaaggtggagctggagctaagggagagcctgggccaaggggtcattct
ggcatgcagggcgcccctggacctctgggtgagcctggtcttcctggtgaggctggtatg
gaaggagttcccggaccaaagggtgacagaggccagcggggagaagtcgggccgcaggga
gtcgtaggcaagcctggaaacaaaggagagagaggacccatcggtgttccaggtgctcag
ggcctgagtggaacaaaaggagacaagggcttccaaggaaaattcgggtcaaagggcgac
attggtgaccccggtgttgagggattggccggcgagaaaggtgaaaagggtttgtctggt
gaacccgggcccaaaggacagcaaggaatcagtggtgacagtggacacaatggacccaca
ggagaccctggtaaacctggagaccagggaccagcaggacttcctggtccaaggggactc
aatggagagcgcggagttcccggcatgcccggcattcagggctcatctggacgtgacgca
tcagaccagcatattattgaagtggtgttgaagatgttgcaggagaggctcgcagcagtg
gcggtgagcgccaagcgtgctgtgctcggtggagcaggcgtgatggggcctcccgggcct
cctggacctccaggggcaactggacctcaggggccgcacggcttacctggtgcacgtggt
attcctggcatttttggagcagcagggcagattggaaacacgggacttaaaggaaagaga
ggagcaaagggagatcgaggagatcccggcaaaccccatccaggacttccaggaccccct
ggaatacaaggtcctcctggtgtcgacggagtggctcgggacggtagacacggcgagaga
ggacctgaaggagcagctggagaggccggtcgccccggtaaggcgggttcgcaaggtctc
ccaggctactgcgaggcggcgatgtgtctggccgcgtcggcgtacacctccccgagacta
caggaggcgggaacaatcaaaggacccaatgtttag
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