Semicossyphus pulcher (California sheephead): 138609709
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Entry
138609709 CDS
T10596
Symbol
cltcl1
Name
(RefSeq) clathrin heavy chain 1 isoform X1
KO
K04646
clathrin heavy chain
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04142
Lysosome
spul04144
Endocytosis
spul05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
138609709 (cltcl1)
04142 Lysosome
138609709 (cltcl1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
138609709 (cltcl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spul04131
]
138609709 (cltcl1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
spul04147
]
138609709 (cltcl1)
Membrane trafficking [BR:
spul04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
138609709 (cltcl1)
Exosome [BR:
spul04147
]
Exosomal proteins
Proteins found in most exosomes
138609709 (cltcl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_PEP5_VPS11
TPR_COPA_B
TPR_Vps41
Gp18_dom_I
LVIVD
Motif
Other DBs
NCBI-GeneID:
138609709
NCBI-ProteinID:
XP_069538454
LinkDB
All DBs
Position
Unknown
AA seq
1718 aa
AA seq
DB search
MAQILPIRFQEHLQLQNMGVNPANIGFSYLTMESDKFICIREKVGEQNQVVIVDMSDPTN
PIRRPISADSAIMNPASKVIALKAAKTLQIFNIEMKSKMKAHTMTEEVMFWKWISVNTVA
LVTDTAVFHWSMEGDSQPTKVFDRHASLAGCQIINYRTDEQQKWLLLIGISAQQNRVVGA
MQLYSVDRKVSQPIEGHAAAFGEFKVEGNAKPSTLFCFAVRSQAGGKLHIIEVGQPAAGN
QPFAKKAVDVFFPPEAQTDFPVAMQIGNKHGVIYLITKYGYIHLYDLESGVCIYMNRISA
ETIFVTAPHEATSGIIGVNKKGQVLSVCVEEENIVNYATNVLQNPDLALRMAVRSNLAGA
EEVFARKFNTLFAQGSYSEAAKVAASAPKGILRTAETIRKFQSVPAQPGQASPLLQYFGI
LLDQGQLNKFESLELCRPVLQQGRKQLLEKWLKEDKLECSEELGDLVKSSDPTLALSVYL
RANVPNKVIQCFAETGQFQKIVLYAKKVGYTPDWVFLLRNVMRVNPDQGLQFAQMLVQDE
EPLANINQIVDVFMEGNLIQQCTSFLLDALKNNRPAEGHLQTRLLEMNLIHAPQVADAIL
GNQMFTHYDRAHVAQLCEKAGLLQRALEHYTDLYDIKRAVVHTHLLNPEWLVNFFGSLSV
EDSLECLRAMLSANIRQNLQLCVQVASKYHEQLGTQSLVELFESFKSYEGLFYFLGSIVN
FSQEPDVHFKYIQAACKTGQIKEVERICRESNCYDPERVKNFLKEAKLTDQLPLIIVCDR
FDFVHDLVLYLYRNNLQKYIEIYVQKVNPSRLPVVIGGLLDVDCSEDVIKNLIMVVRGQF
STDELVEEVEKRNRLKLLLPWLESRIHEGCEEPATHNALAKIYIDSNNTPERFLKENPFY
DSAVVGKYCEKRDPHLACVAYERGQCDLELIKVCNENSLFKSEARYLVRRKDPELWANVL
EENNPFRRQLIDQVVQTALSETQDPEEVSVSVKAFMTADLPNELIELLEKIVLDNSVFSE
HRNLQNLLILTAIKADRTRVMEYINRLDNYDAPDIANIAISNELFEEAFAIFKKFDVNTS
AIQVLIEHIGNLDRAYEFAERCNEPAVWSQLARAQLQRDLVKEAIDSYIKAVDPSAYMEV
VNAASKNNNWEDLVKFLQMARKKARESYVETELIFALAKTNRLAELEEFVSGPNNAHIQQ
VGDRCYEEGMYEAAKLLYNNVSNFARLASTLVHLGEYQAAVDSARKANSTRTWKEVCFAC
VDGEEFRLAQICGLHIVIHADELEELISYYQDRGYFEELIALLEAALGLERAHMGMFTEL
AILYSKFKPQKMREHLELFWSRVNIPKVLRAAEQSHLWAELVFLYDKYEEFDNAVLTMMS
HATDAWKEGSFKDIIAKVANVELYYKSLSFYLEYKPLLLNDLLAILSPRLDHSRAVSFFS
KMNQLKLVKPYLRSVQSHNNKSVNEALNNLLTEEEDYQGLRASIDAYDNFDTIGLAQRLE
KHELIEFRRIAAYLYKGNNRWRQSVELCKKDKLYKDAMLYAAESKDAELAETLLQWFLEE
DRKECFAACLFASYDLLHPDVVLELAWRHNIMDFAMPYFIQVMREYLTKVDEFAAKVTVD
KLEEAESQRKTEDEVTEPQPMVFGQQLMLTGSAAPVAPQPAYPGYGYPAAAPAAGYPAAA
PAAGYPAQPPAAPVGYPAQPVAAAAGFPAQPAAYGFNM
NT seq
5157 nt
NT seq
+upstream
nt +downstream
nt
atggctcagatactgccgatacgatttcaggaacatctgcagttgcagaacatgggagtg
aacccggccaacatcgggttcagctacctgaccatggagtcggacaagttcatctgcatc
agagagaaggtgggcgagcagaaccaggtggtgatcgtggacatgtctgaccccaccaac
cccatcaggaggcctatctctgccgacagcgccatcatgaaccccgccagcaaggtcatc
gctctgaaagctgccaagacgctgcagatcttcaacattgagatgaagagtaagatgaag
gctcacacgatgacggaggaggtcatgttctggaagtggatatcggtaaacactgttgcc
ttggtgacagacaccgctgtctttcactggagcatggagggggattcccaaccaaccaaa
gtgtttgatcggcacgccagtctggccggatgtcagatcatcaactacagaactgacgaa
caacagaagtggctgctgctgatcgggatatctgcacagcaaaaccgtgtggtcggggcg
atgcagctgtactctgttgataggaaagtgtcccagcccatcgagggccatgccgctgcc
ttcggggagttcaaagtggaaggaaatgccaaaccctccactctcttctgctttgctgtg
cgctcacaggccgggggaaagttgcacatcattgaagttggccagccagctgcgggaaac
cagccgtttgcaaagaaagcagtggatgtgttcttccctcctgaggcgcagacagacttc
cctgtagctatgcagatcggtaacaagcacggtgtgatatacctgatcacaaagtacggc
tacattcacctgtatgacctggagtctggagtgtgtatctacatgaaccgaatcagtgca
gagaccatctttgtaacggctcctcatgaagccacctcgggaattatcggggttaataag
aagggacaggtgttgtcagtgtgtgtggaagaagaaaacattgtcaactatgccaccaac
gtcctgcagaaccctgatctagccttaaggatggctgtgaggtcaaacttggctggggct
gaggaggtatttgccaggaagttcaacactctgtttgcccagggaagttattcagaggct
gcgaaggttgctgcatcagcacccaagggtatccttcggacggcagagaccatccgtaag
tttcagagcgtcccggcccagccaggccaggcttctcctctgttgcagtactttggtatt
ctgctggaccagggccagctcaacaagttcgagtctctggagctgtgcaggccggtcctg
cagcagggccgcaagcaactgctggaaaaatggctgaaggaggacaagctggagtgctca
gaggagctgggagacctggtgaagtcctcggaccccaccctcgctcttagtgtgtatctc
agagctaacgtccccaacaaggtcatccagtgctttgcagagaccggacagtttcagaag
atcgtgctgtacgctaagaaggtgggctacaccccagactgggtgtttttgctcagaaat
gtgatgcgggtcaacccagaccagggactccagttcgcccagatgctggtccaggacgag
gagccgctggccaacatcaaccagatcgtagatgtgttcatggagggtaacctgatccag
cagtgcacctccttcctgttagatgctctaaagaacaaccgtccagctgaagggcaccta
cagacacgtctgctcgagatgaacctcatacatgccccccaggtagcagatgccatcctg
gggaaccagatgttcacgcactatgaccgagcccatgttgctcagctgtgtgagaaagca
gggctgctgcagagagctctcgaacactacaccgacctgtatgacatcaaacgagccgtg
gtgcacacacatctgctcaaccccgagtggctggtgaacttctttggctctttatcagta
gaagattcgttggagtgtttaagggccatgttgtcggctaacatcaggcagaacctgcag
ctgtgtgtccaggtagcttctaagtatcacgagcagctggggactcagtcattagtggag
ctctttgaatccttcaagagttatgagggtttgttttacttcctcgggtcgattgtgaat
ttcagccaagagcctgacgtgcactttaagtacatccaggctgcctgtaaaacgggtcaa
atcaaagaggtggagagaatctgtagagagagcaactgctacgacccggagagggtcaaa
aacttcctcaaggaggctaagctaacagaccagcttcctctcatcatcgtgtgtgatcgc
tttgacttcgtccatgacctggtgctctacctctaccgcaacaatctacagaaatacatt
gaaatctacgtacagaaggtgaaccccagccgtctaccagtagtgataggcggcctgttg
gatgtcgactgttctgaggacgtcattaagaacctcatcatggtggtccgagggcagttt
tccactgatgagctggtggaggaggtagagaagaggaacaggttaaaacttctgttgccg
tggctggagtcccgtatccacgaaggatgcgaggagccagctacccataatgccctggca
aagatctacatcgacagcaacaacacacccgagcgcttcctgaaggagaacccgttctac
gacagcgccgtggtgggaaaatactgcgagaagagagacccccacctggcctgtgtggcg
tatgagagaggacagtgtgacctggagctcatcaaagtgtgcaatgagaactcgttattc
aagagtgaggctcgatatctggtacgacggaaagatccagagctttgggcgaacgtgttg
gaggaaaacaaccccttcagaagacagctcatcgaccaggtggtgcagacagctctgtca
gagactcaggacccagaggaggtgtcggtctcagtcaaggccttcatgactgcagatctg
cccaatgagctgattgagctgctggagaagatcgtacttgataactctgtcttcagcgag
cacagaaacctccagaacctgctgattctgacggctatcaaggcagaccgcacgcgtgtg
atggagtacattaacagactagataactatgacgctccagacatcgctaacatcgctatt
agcaatgagctctttgaagaggcatttgccattttcaagaagtttgatgtgaacacctcg
gccatacaggtattgatagagcacatagggaacttggatcgtgcctatgagttcgcagag
cgctgtaatgagcctgccgtgtggagccagcttgcccgagctcagctgcagagagacctg
gtgaaggaggccatcgactcgtacatcaaagctgtcgacccttcagcgtacatggaggtg
gttaacgcagccagcaagaacaataactgggaagatttggtgaaattccttcagatggct
cgaaagaaagcgagagagtcgtacgtggagacggagctgatctttgccttggctaaaaca
aaccgtctggctgagctggaggagtttgtcagcgggccgaacaacgctcacattcagcag
gttggcgatagatgttatgaggagggaatgtatgaagcagccaagctcttgtacaacaac
gtgtccaactttgctcgccttgcatcaacactcgtccacctgggggagtaccaggcagcc
gtggacagcgccaggaaagcaaacagcacacggacatggaaggaggtgtgtttcgcgtgt
gtcgacggcgaggagttccgcctggctcagatctgcggcctccacatagtgatccacgct
gacgagctggaggaactgatcagctactatcaggaccgcgggtactttgaggagctcatc
gctctgctggaggccgcgctcgggctggagcgggcccacatggggatgttcaccgagctc
gccatcctctactcgaagttcaagcctcagaagatgagggagcacctggagctcttctgg
tccagagtcaacatcccaaaggtcctccgtgcagcagagcagtctcatctatgggctgag
ctggttttcctttatgataaatacgaggagtttgacaacgccgtcctcacaatgatgtct
catgcgacagatgcgtggaaagaagggtcgttcaaagacattattgctaaggttgcaaat
gtggagctgtactataaatctctttccttctacctggaatacaaacccctcctactgaac
gacctgctcgccattctgtctccacggctggaccacagccgagctgtctcctttttcagc
aagatgaaccagctgaagttggtcaagccgtacctcaggtctgtccagagtcacaacaac
aagtccgtcaatgaagccctcaacaacctgctgacagaggaggaagattaccagggcctg
agagcgtccattgatgcttatgacaactttgacaccattggccttgcacagaggttagag
aaacatgaactgattgagttcaggcgtattgctgcttacctgtacaaaggtaacaaccgc
tggagacagagtgtggagctgtgcaagaaggacaaactctacaaggatgccatgctgtac
gctgcagagtctaaggatgctgagctggcggagactctgctccagtggttcctggaggag
gacaggaaggagtgcttcgctgcctgcctgttcgcctcctatgacctgctgcaccctgac
gtggtgctggagctggcctggaggcacaacatcatggactttgccatgccgtacttcatc
caggtcatgagagagtacctcacaaaggttgatgagtttgcagcgaaggtgacggtggac
aaactggaggaggcagaaagccaaaggaaaaccgaagatgaggtgacggagcctcagccg
atggtgttcggccagcagctgatgctgacgggctctgcagcaccagtagctccacagcca
gcttaccctggttatggttaccccgcagccgctccagctgctggttaccctgcagccgct
ccagctgctggttaccctgctcagccccctgcggcccccgtgggctacccggctcagcct
gttgctgctgctgctggcttccctgctcagccagctgcatacggcttcaacatgtag
DBGET
integrated database retrieval system
