Semicossyphus pulcher (California sheephead): 138609755
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Entry
138609755 CDS
T10596
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spul03036
]
138609755
Chromosome and associated proteins [BR:
spul03036
]
Eukaryotic type
Meiosis-specific proteins
Others
138609755
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5587
RACo_linker
Motif
Other DBs
NCBI-GeneID:
138609755
NCBI-ProteinID:
XP_069538504
LinkDB
All DBs
Position
Unknown
AA seq
1542 aa
AA seq
DB search
MRAEQRERSENGSFLPAQIFSTNRYKALDYVFETTTSLKIMMNLLALPTPYFIGSSDLYP
HSGKLPEATYRTPWIRGKVISDCKLFDSGSVLIDLRGKMQPVNSFERFHVTLSEVKRDVE
VIPSSNPDSLTDLDQDEYVCLLKESQINNPCQESFYKWATDQMKPGNNNKYILLPDELVP
VDYLSQFKKHLPTLKAKLSRLRTLPVADPLLSSTGQTISEDSIFRHCAPYEKPPDVNSSN
IQMCANKHEEFGKESLIKEESLLLPVVVDRINLSPENRINFSSICSRMNVAPELLDEQPA
VLDVLHKARHWRDVFSASLSDVPVSMEIFHYEIPDESNRTCQINRGLAESELAGRLKLPT
EMELDMTLTSTPDQTSDTRICPSTCQLQREVLSPLCRRSLVSAAAQREMEAALWKAEKHP
AFVVGFLLAEPQIHEQPADFQPLSEALKVIKLDNESSVGVDDKLQSQMRTGTRQVNLCSN
CEFTESLRSEFPSEQKMEDFTKLSPEHVEFTAGSTFMNPINKAQLSHLKKSKSAAFVTEV
TVDPLPQRESGADTSQTTFLMHTFNTNKPSATTSNKDEVSDTRFSEVSAVVSAQKNDIDT
GGDGCEPHQGVHAPQQAVSSRLNVRDEHRGPLVTRRPPEKDLDPLSTFMMLRSQQTAPAA
AALQTSDSAPAQQKEQQRPPELQPPPEQMQRSDRRPTYMSGAVSGNATREQKAAFQSTGQ
LISHPVSQDSRVVQVQATDSQQCAYFELLAFAQPCLSSAIQLGLNAPAGGDFSCLSPDQT
HFLLKQQEKALCRTQAQNTELVKDQEVLFNQAALIHVLVTLKELLLKCELSTALEYLTRA
TEASAEQSLQQLVKRLQIIFYLSHKHQESNLKLLELQQLLAELLHSRKGQSSVEKILVMI
SVDSDDDRSLIINSLNQVPGAAVTAVCPEKDKKKLNGASVVSSMRDSVCVVVCEQHVGPD
FPWKCFSLVVEYDHPGQSPWSTICRERSVNHLCFNTVVSHTETEETSWCLEDNVPYVLFV
TEGLLNCPLLLQTLESGFNITVLERSHCPSLQMLGGTHQYAVITVDESTAIIVQGEEELC
QERASERVVMRLTTLSLQYNCCWLILHCPDFQGGGFSSEAFNNLVLVYSSLVLFSMKSED
LDVKVLIVSEVVEVAQWISQICFHSLMTSDRKPVDYLDRDWLTVIPSEIVQSYLQFYVLC
VYVLSYLLQEEKCLLQFPCINPLVSQLMLSRAPSFQWLLVASLSQLQQLLPEVSHKVLKL
FSDTTSLYTPTTDQYQPESQTVITETNQQTSPTNNHWTTTVGPKHMTSDPLPETPINPHL
DPSDTSFLFGTDHSFCEPDPDSNVQDETTDFRLDLSSSFGSPEVHLQRVWAGRDPWREEE
RGGKEVEFSCWRTRAGAVGRVVERVNNEWTPTKPESPFRLASTFSYSPVLQQPARSHLTT
YSTVYNGIQHPGSRCIPYGLSPSPEVVMWGQGQSSDLYFTNSAETTTVSANYGSKCWLGQ
ERKRRGEAAGLVGTVLTPLKKGRLSYEKVPGRSDGQTRLRLF
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcggagcagagagaaaggtcagaaaacggcagcttcttacctgctcagatattc
tcaactaacagatataaagctctggactatgtttttgagaccaccaccagtctgaaaata
atgatgaacttgctggcactaccaacaccttactttattggtagcagtgacctgtacccc
cacagtggcaagctgcctgaagccacatacaggacaccgtggataagaggaaaagtgatt
tccgactgcaaactctttgatagcggttcagtgctgattgacctgagagggaaaatgcaa
ccagtgaattcttttgaaaggtttcacgtgactctgagtgaggtaaaaagggatgtggag
gtgatacccagctctaatcctgactcattgacggatctagaccaggacgagtatgtttgc
ctattaaaagagtcacagatcaataatccgtgccaggaatcattttacaagtgggcaact
gaccagatgaaacctggaaataacaacaaatatatcctcctgccggacgagctcgttcct
gttgattacctgtcacagtttaagaaacatttaccaacgctgaaagccaaactgtcccgg
ctgaggactcttcctgtggccgatcctctgctgagctcaacaggacagaccatctctgag
gactccatattcagacactgtgctccttatgaaaaacctcctgatgtaaacagcagtaac
attcagatgtgtgcaaacaaacatgaggaatttggtaaagagtcactgatcaaagaagag
tctctgctgttgccggttgtagtggacagaatcaatctgagtccagaaaaccgcatcaac
ttttcaagcatttgtagccgtatgaatgttgctcctgaactgctggatgagcaacctgca
gtcctggatgtgcttcataaagcgcgacactggagagacgtgttttcggcttccctttca
gatgtgccagtatcaatggaaattttccattatgaaataccagatgagtccaacagaaca
tgccagattaacagaggcctggcggagtcagagttggcaggacgtttgaagcttcccact
gaaatggagcttgacatgactttgacctcaactccagaccagaccagtgacaccagaatc
tgtccgtccacatgtcaactccaaagggaagtgttgtccccgctctgcagacgctctttg
gtgtcagcagcagctcagagagagatggaggcggcactttggaaggcagagaaacatcca
gcctttgtggtgggctttctgttggcagagcctcagattcatgaacaaccagcagacttc
cagcctctgtctgaagccttgaaagtcataaaattagataatgaaagttctgttggcgtt
gatgacaaactgcagtcacagatgaggacgggaacccgacaggtgaatttgtgcagcaac
tgtgagttcacagagagcctgaggtctgagtttccctccgagcagaagatggaagacttc
acaaaactgtcacctgaacatgtggagttcacagctggatccaccttcatgaatcccata
aacaaagctcaactctctcacctgaagaaatcgaaaagtgctgcttttgtcaccgaagtt
actgtagaccctcttcctcaaagagaaagcggtgctgatacatctcaaaccacctttctg
atgcacaccttcaacacaaacaaaccttctgccaccaccagcaacaaagatgaagtttct
gacacaaggttttcagaagtttcagctgtggtttctgctcagaagaacgacattgacaca
ggtggagacggctgtgaaccacaccaaggtgtgcacgctcctcagcaggctgtgtcctcc
agactgaatgtcagagatgaacacagaggtccgctggttacaagacgtccaccagagaag
gacctggaccccttgtccaccttcatgatgctgaggtctcagcagacagctccagctgct
gcagcacttcagacttcagacagcgctccagcacaacagaaggagcaacaaagaccacct
gagctgcagcctcctccagagcagatgcaaagatcagacaggaggccgacgtacatgagc
ggtgctgtgtcaggaaacgctaccagagagcagaaagcagcttttcagtcgactggccaa
ctcatcagtcatcctgtcagtcaggacagcagagtggtacaggtccaagctacagacagc
cagcagtgtgcctactttgagctgctggcctttgctcagccatgtttgagctcggccata
cagctcgggctcaacgctccagcagggggagactttagctgcctgtccccggaccaaaca
cacttcctccttaaacagcaggagaaggccctctgcaggacacaagcacagaacacagag
ctggtcaaagatcaggaggtgcttttcaaccaggcagctctgattcatgttctggtgaca
ttaaaggagctgctgctgaagtgtgaactcagtactgcattggagtacctgacccgggca
actgaggcgagcgcagagcagagtctgcagcagctggtgaagaggctgcagatcatcttc
tacctcagtcacaagcaccaggagtccaacctcaaactgctggagctgcagcagctgctg
gctgaactgctgcacagcaggaaaggacagagcagcgtggagaagattcttgtcatgata
tcagtcgactctgatgacgacagatctttaatcatcaacagcttgaaccaagtgcctggt
gctgctgtaactgcagtttgtcctgagaaggataagaagaagctcaatggtgccagtgtg
gtcagcagcatgcgagacagtgtgtgtgtggtggtgtgcgagcagcatgttggccctgat
ttcccctggaagtgtttctctctggtggtggagtacgaccacccaggacagtcaccgtgg
tcaacaatctgcagagagaggagcgtgaatcacctctgcttcaacacagttgtctcccac
actgagacagaagaaacctcctggtgcctggaggacaatgtgccgtatgtgttgtttgtg
actgaggggcttctaaactgtccactgctgctgcagacgcttgagtcagggtttaatata
actgtgctggagaggagccactgtccctcattgcagatgctcggtgggacccatcagtac
gcagtgatcacagtggatgaaagcaccgctattatcgtgcagggggaagaggaactatgt
caggagcgagccagtgagcgagtggtgatgaggctgacaactctgtctctgcaatacaac
tgctgttggctcattctgcactgcccagacttccagggaggaggattttccagcgaagcc
ttcaacaacttggtgttggtttattcgtctctggtgctgttcagcatgaagtcagaggat
ctagacgtgaaggtgctgattgtgtctgaggtggtggaagtggcccaatggatcagtcag
atctgcttccacagcctgatgaccagtgacaggaaacctgtcgactacctggacagagac
tggctgactgtgatcccctcagagatcgttcaatcttatttgcagttttatgttttatgt
gtttacgtcttgtcttatctgcttcaggaggaaaagtgtctgctgcagttcccctgtatt
aaccctctagtcagtcagttaatgctgagcagagcaccatctttccagtggctcctggtg
gcctctctgtctcagctgcagcagctgctcccagaggtgtcgcataaagtcctcaagctg
ttcagtgacaccacctccctgtacacacccaccacagaccaataccagccagagtctcag
acagtcatcactgagacaaaccaacaaaccagcccaacaaacaaccactggaccaccacg
gttggccccaagcacatgacctctgacccactaccagaaacccccatcaacccccatcta
gatccttccgacaccagcttcctgtttggaactgatcacagcttctgtgaaccggaccca
gactcaaatgtgcaggatgaaaccacagatttcagactcgacctgagttcctcctttggc
agcccagaagttcacctccagagggtctgggccggcagggatccatggagagaggaggaa
agaggcgggaaggaggtggagttttcatgctggagaaccagagctggagctgtggggaga
gttgttgaaagagtgaacaatgagtggactccaacaaagcctgagagtcctttcaggctg
gcgtctacgttcagttacagtcctgttctgcagcagccagccagaagccacttgactacg
tactctacagtctacaatggcatccagcatccaggtagccgctgcataccatacggcctg
agcccttctccagaggttgtgatgtggggtcaaggtcaaagcagtgacctctacttcacc
aacagtgcagagacaacaacagtgtcagccaattatggctccaaatgctggttgggacaa
gagaggaagaggagaggcgaggcggcaggtctggttggaacagtgttgacaccactgaag
aaagggaggttgagctatgagaaggttcccggccgcagtgatggtcagacgaggctgaga
ttattttaa
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integrated database retrieval system