Semicossyphus pulcher (California sheephead): 138609825
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Entry
138609825 CDS
T10596
Symbol
smarca2
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
spul03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
138609825 (smarca2)
Chromosome and associated proteins [BR:
spul03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
138609825 (smarca2)
Chromatin remodeling factors
BAF complex
138609825 (smarca2)
PBAF complex
138609825 (smarca2)
GBAF(ncBAF) complex
138609825 (smarca2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Other DBs
NCBI-GeneID:
138609825
NCBI-ProteinID:
XP_069538585
LinkDB
All DBs
Position
Unknown
AA seq
1589 aa
AA seq
DB search
MSTPSDTSGGMSHPGPSPGAGLSPGPILGPSPGPDPSPGSVHSMMGPSPGPGTPNAPHGM
QGQGQSEYSQDAMYPMHKTMEGMNEKTMADAMHFGHMKGVGMRSLHSGMGPPQSPMDQHS
QGYMSPHPSPMSVHEHSSSPMSGGGGGGGPTPPHIPPTQPGPMMSMDPQGAMPNMSQQGR
GPSAFSPVQLQQLRAQILAYKILGRGQPLPENLQLAVQGKRSLPTMQQQQHQHQQQQQQQ
QQQAPSASPYNRPPGMSMAPMGGPQSSPCPTPAMQGHNQSTGPKPWSEGQGGENQANAQK
HLTPVASGRPSPAPPQASAVPAGPMPGSSVTPQPPGQQVSPMLQMQQKQNRITPIQKPQG
LDPVGILQEREYRLQARIAHRIQELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQDV
VACMRRDTTLETALNSKAYRRSKRQTLREARMTEKLEKQQKLEQEKKRRQKHQEYLNSIL
QHAKDFKEYHRSVSGKMQKLTRAIATWHTNTEREQKKETERIEKERMRRLMAEDEEGYRK
LIDQKKDKRLAYLLQQTDEYVANLTTLVYEHKAAQAAKEKKRRKKKKKKVDGDGEGTSAI
GPDGEPMDESSQMSELPVKVIQTETGKVLQGTEAPKSSQLEAWLEMNPGYEVAPRSDSEE
SGSEYEEEEEDDAARAETEEKKIIDPSGDGTVVAAKHIIESAKQDVDDEYSVPTGQTSSA
SYYGVAHAVIERVEKQSSLLINGTLKHYQIQGLEWMVSLYNNNLNGILADEMGLGKTIQT
IALITYLMEYKRINGPFLIIVPLSTLSNWVYELDKWAPSVVKIAYKGTPALRRGLVPQLR
SGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRLLL
TGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLH
KVLRPFLLRRLKKEVESQLPEKVEYVIKCDMSAIQKVLYRHMQKGILLTDGSEKDKKGKG
GAKTLMNTIMQLKKICNHPYMFQHIEESFAEHLGYPNGIISGHDLYRASGKFELLDRILP
KLQATNHRVLLFCQMTTLMTIMEDYFGYRNFQYLRLDGTTKAEDRATLLKKFNEEGSQYF
IFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSV
EEKILAAAKYKLNVDQKVIQAGMFDQKSSGQERRVFLQAILEHEEQNEEEDEVPDDETLN
QMIARNEDEFELFMRMDMDRRREHARNPKRKPRLMEEDELPSWIIKDDAEVERLTYEEEE
EKMFGRGSRCRRDVDYSDALTEKQWLRAIEDGNLEEMEEEIRLKKRKRKRRQDKDSSSRD
EGSSKAKKRRGRPPAEKLSPNPPKLTKQMNTIIDTVINYRDGSGRQLSEVFVQLPSRKEL
PEYYELIRKPVDFKKIKDRVRSHKYRNVGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQ
SVFKSARQKIAKDEESEDDSEEEEDDEDESESEAKSVWVKIKLSKEGRSSDKGKKRQSRG
KAKPVVSDDDSDEDQDDNDQSDKSKSDDE
NT seq
4770 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccccttcagacacttcaggtggtatgtcccatcctggcccttctccgggggca
ggtctgtccccagggcccatcttgggccccagccctggaccggacccctccccaggctct
gttcacagtatgatgggaccaagtcctggacctggaacaccaaatgcacctcatggcatg
cagggccagggacaaagtgaatactctcaggatgcaatgtatcctatgcacaagacaatg
gaggggatgaatgagaagaccatggcagatgcgatgcacttcggtcacatgaaaggcgtg
gggatgagatctctgcatagtggtatggggcctccacaaagtcctatggaccagcacagc
caaggatacatgtccccccatccttcccccatgagtgtccatgagcattcctctagtccc
atgtcaggaggtggaggtggtgggggacccacaccgccccacattccccccacccagcca
ggcccaatgatgtccatggatcctcagggagccatgcccaacatgagccagcagggccga
ggaccttctgccttcagtccggtccagctgcagcagctcagagctcagatcctggcctac
aaaatcctgggccgtggccaacccctgcctgaaaacctgcaactggctgttcagggcaag
aggagtctacccacaatgcaacagcagcagcatcagcatcaacaacagcagcagcagcag
caacaacaggcccccagtgctagtccttacaacaggcccccaggtatgtcgatggcccct
atgggtggtccccagtcgagtccctgccctacaccagccatgcaaggtcacaatcaaagc
acaggacccaagccctggtctgaaggtcagggtggtgaaaatcaagccaatgctcaaaaa
cacctcacacctgttgccagtggacgtccgtctccagctccccctcaggcctctgctgtg
ccagctggacccatgccgggcagctcagtgaccccgcagcctcccgggcagcaggtgtcc
cccatgctccagatgcagcagaagcagaaccgcatcacgcccatccagaagccccagggc
ttggaccctgtggggatcctgcaagagagagaatacagactgcaggctcggattgcacat
cgaatccaggagctggagagtttgccaggatctctgccccctgacctgaggactaaagcc
actgtggagctcaaggctctacgtctgctcaacttccagcggcagctgagacaggacgtg
gtggcgtgcatgaggcgagacaccaccctggagacggccctcaattcgaaggcttacagg
cgcagcaagcggcagacgctgagggaggcccgcatgaccgagaagctggagaaacagcag
aagctcgagcaggagaagaagcgcaggcagaaacatcaggagtatctcaacagcatcctt
cagcatgcaaaagacttcaaagagtaccaccgctcagtgtcgggtaaaatgcagaaactc
accagagccatcgccacctggcacaccaacaccgagcgggaacagaagaaggagaccgag
aggatcgagaaggagaggatgaggagactcatggcagaagatgaggaaggctaccgaaaa
cttatcgaccaaaagaaagacaagcgtctggcctacttgctgcagcagacggacgaatac
gtggccaacctcaccaccctggtgtacgaacacaaagctgcccaggccgccaaggagaag
aagaggaggaagaagaaaaagaagaaggtggatggagatggagaaggcaccagcgccatt
ggacctgatggagagcccatggatgagagcagccaaatgagcgagctgccggtcaaagtg
attcagacggaaactgggaaagttctgcagggaaccgaagctcccaaatccagccagctg
gaggcctggctcgagatgaaccctggatatgaagttgccccgcggtcagacagtgaggag
agcggctcagagtatgaggaggaggaggaagatgacgctgccagggcagagacagaggag
aagaagataatcgatcccagtggagacgggactgtggtggctgccaagcacatcatcgag
tcagccaaacaggatgtggacgatgagtacagcgttcccactggacaaacaagctctgcg
tcttactacggcgtggcccacgctgtcatcgagcgggtggagaagcagtcgtcgctgctg
atcaacggcacgctcaaacattaccagatccagggtctggagtggatggtgtccttgtac
aacaacaatctaaacggcatcctggctgatgaaatgggcctcggcaaaacaatccaaacc
atcgcccttatcacctacctgatggagtacaaaaggatcaacggccccttcctcatcatt
gttcctctctcgactttgtctaactgggtctatgaacttgacaagtgggcaccctctgtg
gtgaaaattgcttacaagggaacccctgctttgcgccgagggctggtgcctcaactccgc
agcgggaagttcaatgtcttgctgaccacctatgaatacatcatcaaggacaagcacata
ttggccaagattcgttggaagtacatgattgtagacgagggtcaccgcatgaagaaccac
cactgtaagctgacgcaggtgttgaacacgcactacgtggctcctcgccgcctcctcctc
accggcacaccgctgcagaacaagctgcctgagctgtgggccctgctcaacttcctgctg
cccaccatctttaagagctgcagcaccttcgagcagtggttcaacgccccgttcgccatg
acaggagagagggttgacctaaatgaggaggagaccatcctgattattcgccgtttgcat
aaagtgctccgccccttcctgctgcgcagactgaagaaagaggtggagtctcagctgcca
gagaaggtggagtatgtcataaaatgtgacatgtctgccatacagaaggttctgtaccga
cacatgcagaaaggaatccttctcactgacggctcggagaaagacaagaagggcaaaggt
ggagcaaagactctgatgaacaccatcatgcagctgaagaagatctgcaaccatccgtac
atgttccagcacattgaggaatcttttgctgaacacttgggatatcccaacggcatcatt
agcgggcatgatctgtatcgagcttctggaaagtttgagctcctggaccgcatcctgcca
aagcttcaggccaccaaccacagagtcctgctgttctgccaaatgaccaccctcatgacc
atcatggaggactacttcgggtaccgcaacttccagtatctacgtcttgatggaaccaca
aaggctgaggaccgagcgactctactgaagaagtttaacgaggaaggatctcagtacttc
atcttcctgctcagcaccagagccgggggactcggcctcaacctgcaggccgcagacact
gtcgtcatctttgacagtgactggaaccctcaccaggaccttcaggctcaggaccgggct
caccgcatcggtcagcagaacgaggtgcgcgtgctgcgtctctgcaccgtcaacagtgtg
gaggagaaaatcttggcagcagccaaatacaaactgaacgtggatcagaaggtcatccag
gcgggcatgttcgaccagaagtcctcaggccaggagcgccgtgtcttcctgcaggccatt
ttagagcatgaggagcagaatgaggaagaagatgaagtacccgatgacgagacccttaac
cagatgatagctcgcaacgaagatgagtttgagctcttcatgcgcatggacatggaccgc
cgccgggagcacgccaggaacccaaagcgtaagcctcgtctcatggaggaggacgagttg
ccctcttggatcatcaaagatgacgccgaggttgaacggctcacgtatgaagaggaggag
gagaagatgttcggccgaggatcgcgctgccgtcgggacgtggactacagcgacgcactg
accgaaaaacagtggctacgggccattgaggatggaaacctggaggagatggaggaggag
atcaggctgaaaaagcgcaaacgtaagaggcgtcaggacaaggactcatcgagcagagac
gagggcagctccaaggccaagaagagacgtggacgtcctccagctgagaaactctctcct
aacccccccaaactcaccaagcagatgaataccatcatcgatacagtcatcaactacaga
gacgggtcaggaagacaactgagtgaagtgtttgtgcagttaccatccaggaaagagctc
ccagaatattatgagctcatcagaaaacctgtggacttcaaaaagatcaaggaccgtgtg
aggagccataaatacaggaacgtgggagacctggagaaggacgtgatgctgctttgtcac
aacgcccagaccttcaacctggagggatcccagatatacgaggactctattgtccttcag
tctgtgttcaagagcgccaggcagaagatcgccaaggacgaggagagtgaagacgacagc
gaggaggaggaggatgacgaggatgagtcagagtcagaggccaagtcggtgtgggttaag
atcaagctgagtaaggagggccgcagcagtgacaaaggcaagaagaggcagagccgaggg
aaagccaagccggtcgtcagtgacgacgacagtgatgaagaccaggatgacaatgatcag
tcagacaagagcaagagcgacgacgagtga
DBGET
integrated database retrieval system
