Semicossyphus pulcher (California sheephead): 138610144
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Entry
138610144 CDS
T10596
Symbol
skic3
Name
(RefSeq) superkiller complex protein 3
KO
K12600
superkiller protein 3
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
138610144 (skic3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spul03019
]
138610144 (skic3)
Messenger RNA biogenesis [BR:
spul03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
138610144 (skic3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_19
TPR_11
TPR_14
TPR_8
TPR_17
TPR_12
TPR_CcmH_CycH
TPR_9
ANAPC3
TPR_7
ARM_TT21_N
ARM_TT21_C
TPR_Slam
TPR_TmcB
Fis1_TPR_C
PknG_TPR
DUF6979
Motif
Other DBs
NCBI-GeneID:
138610144
NCBI-ProteinID:
XP_069538952
LinkDB
All DBs
Position
Unknown
AA seq
1570 aa
AA seq
DB search
MSNKEVKTALKSAREAIKNKEFKEALKHCKAVLKLEKNNYNAWVFIGLAASELEQPDQAQ
TAYKKAVELEPEQLLAWQGLANLYEKTDQWDFKLELPNIYQKLVELYASSDKTKCYEMIK
KLSDIYQSDKEYLKLAEVWLQLLRLKEEEAVDKKELLQLWQQMTQLLTDCLKEEEQEHEI
QLHLITAFEKAMVLMDPVPGEEHKKASVDYVKCLSKLPEEEAKMKEACESMLSLYPNQSY
PLEVLCSHYLRKGVLNEDEVGCFSRLLNLDPNSGLGHMGIGTKALQEGRYKDAIKDLAQG
LKKSSSSTGWYSLAEAQLKVHRYSGCAMSCSQGLTVCDSGDKELRVKLLRLQLEALVRSG
GEKAANEALETFSQIPDAGKDPVLMALKGRAYLNEGKVDEALQESSELLASNPDLAQGLV
LRGLAQLAQGEHHLAEESFLKAASQSSDYGEYYFLLGKLYWDMGEETRRDRTKAQTHFLK
AAKLDPHLGCVFRYLGHYYREVAGDPGRARGCYKKAFELDNDDAESGAASVDLCMEQDDM
DTALATLQSVIEKATPGSAKWAWMRRGLYHLKVGEHQQATADLQAALRADPEDWVCWECL
GEAYLNRRSFTAALKAFGKAHQLQPSSIYSVYQAAAIKQTLGKFKEAVAEYLQITAQQDY
VPALKGLGECQLSLAKSLMEDCRDGGAIDLIQQAINNLFRAVTLRPDLSCLWKLLGDACT
AVSTVSPNRGQVQVPAQLAGLEPNTESYTLNQAQTLKVGERCYARALKLMSEVSSLWYDL
GLNYYRQSSLTCPTEGDQNSPSLLLEKAQQCLKKAIMLDSEIYSYWNALGVISMSKGVEN
FALAQHCFIKSTQVEPNNVVAWTNLGTLYLKKDNIELGHEAFKIAQSLEPLYVNCWIGQA
LIAERVGSYDTMDLFRHTTELSTHMEGVKGYAYWVCSTLLDKSNRDSELYRYNIVQMNAI
SAAQVALSKYTERIQSDPEAFIMLGYLNEHLQLKRQALQAYQRAVELLQSKSSTGELAFA
LGSYGRALCTSGQWEEAVRVYKSTPLQELGDLAGLALAYCRAGLIAESINAYERALAVAS
SEKEKAYILTALALLQHRQGNLDSAKTLLFKCSVLKEPIPESLLCLCALGLVHSDATLAA
AALSELLKQGSASGNVIEQRCLLTCALLALQGNFSAVQREASRAVHSNPGNPSLWSLLSR
LVPQYHPKKANGGAMAGQVACLSSMTQGKRALLYSGVNQLASGRHSGEDSHRNALKTMQR
AVLLCPDDPGTWAGLMAACHTENTSCYLSASAPRKQALEQTLMSVVSEKVHNVEEIERPL
AQTLEGWVLQQAVTGLMLGGQLDQAEALCTQVLNVSPEHPAVMLSLRQVQCQRLLVANNG
TVLPDSVLEQLNNTVMLNPTNVGAWHWLAEVYRSQGLLVQAVMAYRRSLQLASQLGVHSS
QVASLLRLALLALEPCMAGLPGNDWTDLILEATTEVLKLGSSPMALLFQALLQFVTKMAA
RETRRLLERLVYVPSQGFPVTVVQVASWYLLRHLHAKNDQELMNVLLQQAKMNEDQRLLE
FHSLLASSSS
NT seq
4713 nt
NT seq
+upstream
nt +downstream
nt
atgtctaataaagaagtaaaaactgcgctgaaaagtgccagagaggccataaagaacaaa
gagttcaaggaggctttaaaacactgcaaggctgtattaaaacttgagaagaacaattac
aatgcatgggtgttcattggcctggcagccagtgaactcgagcagccggatcaggcacag
acagcttataaaaaggcggtggagctggaacctgagcagctactagcatggcagggtttg
gcaaatctttatgagaagactgatcagtgggatttcaaacttgaacttcctaatatctat
cagaagcttgttgagctgtatgcaagctccgacaaaaccaaatgttatgagatgatcaaa
aaactgtcagatatctatcagtctgacaaagagtatttgaagttggcagaagtttggctt
cagctccttcgcctgaaggaggaggaggctgtggacaagaaggagttactgcagctatgg
cagcagatgacccaactcctcacagattgcctgaaggaggaagagcaggagcatgaaatt
cagctgcatttaataacagcatttgagaaggccatggttctcatggatcctgtaccagga
gaggaacacaagaaagcctcagtggactatgtcaaatgtctttctaaacttccagaagaa
gaagccaaaatgaaagaggcctgtgagtccatgctgtccctgtacccaaaccaaagttat
cctcttgaagtcctttgttctcactacctcagaaaaggtgtcctgaacgaagatgaagtc
ggctgcttttccaggctcctgaatctggaccctaacagtggattaggtcacatgggtata
ggcaccaaagcactgcaagaaggaaggtacaaggacgccattaaggaccttgcacaagga
ttaaagaaatcaagctccagtacaggatggtacagcctggctgaagctcagttaaaagtt
cacagatactcaggctgtgcaatgtcctgctcccaaggtcttacagtgtgtgattctggg
gacaaggagctgagagtcaaactgctcaggctgcaactagaggctttagtcaggagtgga
ggagagaaggctgcaaatgaggctttggagacattttcacagatcccagatgctggaaaa
gacccggttctcatggccctcaaaggacgtgcataccttaacgagggaaaagttgatgaa
gcacttcaggagtcatcagagctgctggcctctaaccctgacctggcccagggcttggta
ctgagaggactggcacagttagctcagggtgagcatcatctggcagaggagagttttcta
aaggcagccagtcagagctcagactatggagagtattatttcttgcttggtaaactctac
tgggacatgggagaagagactcgcagagatcggactaaggctcaaacacattttctcaag
gctgcaaagttagacccacaccttggttgtgtattccgctaccttggacattattaccga
gaggtggcaggtgatcccggccgggcacgaggctgctataagaaagcctttgagttggac
aacgatgatgccgagtctggagctgcctcagtggatctctgtatggagcaggatgatatg
gacactgccttagcaacgcttcagtctgtaatagagaaagctactccaggctctgctaaa
tgggcgtggatgagacgaggtctttaccacctaaaggtcggagagcatcaacaagctacg
gctgatctgcaggcagctctgagagccgatccagaggactgggtgtgttgggagtgtttg
ggtgaggcctacttaaaccgccggagcttcacggcggctctgaaagcctttggtaaggcc
catcagcttcaaccctcctccatctatagtgtctaccaggctgctgccatcaaacagacc
ctgggcaagttcaaggaggcggttgcagagtacttacagatcacagcgcagcaggactat
gtccctgctcttaaaggtcttggggagtgccagctgtctctggctaagagtttaatggaa
gactgcagagatgggggagccattgacctcattcagcaagccataaataacctctttagg
gctgtgactctgcgccctgacctgtcttgtttgtggaagctgctgggagatgcttgcact
gcagtcagcactgtgtcgccaaacagaggccaggttcaggtgcccgcccagctggctggt
ttagagcccaacaccgagagttacacactgaaccaggcacagacactcaaagttggtgag
aggtgttatgcccgagctttgaagctgatgtctgaggtctccagcctttggtatgacctt
ggactcaactactaccgccagtccagcctgacctgccccacagagggagaccagaactcc
ccatctctgctcctagagaaggcccagcagtgtttgaaaaaggcaatcatgctggacagt
gagatctattcctattggaatgccttgggagtgatttccatgagtaaaggtgttgagaac
ttcgctctggctcagcattgcttcatcaagtccacccaagtagaaccaaataatgttgtt
gcttggacaaaccttggtaccctgtatctgaagaaagacaatatagagcttggacacgag
gccttcaagattgcccagtcactggagccgctttatgtcaactgctggatcggacaggcg
ctgatagcagagagagtgggaagctacgacaccatggatcttttcagacacaccactgaa
ctgagcacacatatggagggagtgaaaggctatgcctactgggtgtgttccactctgctg
gataagagcaacagagactctgagctgtaccgctacaacatcgtccagatgaacgccatc
tctgctgctcaggtggcactcagcaagtacacagagaggatccagtctgaccctgaagcc
ttcattatgcttggctacttgaatgagcatctgcagctgaagaggcaggctttacaggct
taccaaagagctgttgaactgcttcagtccaagtcatcgacaggagagttggcttttgct
ctgggcagctatggtcgtgctttgtgcacgtcaggccagtgggaggaggcggtgcgtgtt
tataaatccactccactgcaggagctcggtgatctggctgggttggctctggcttactgc
agggcagggctcatcgcagagagcatcaacgcttatgaacgtgccttggctgtggcttcc
agtgagaaggagaaggcttacatattgacggctctggccctccttcagcaccggcagggt
aacctggactctgccaagactctcctgtttaaatgctccgtgttaaaggagccaatccca
gagtctctgctgtgtttatgtgccctgggactggtccacagcgatgctacattagctgct
gctgccctgtctgagttgctgaagcaaggttcagcctctggaaatgttattgagcagcga
tgtcttctcacctgcgccctgctggccctgcagggcaacttcagtgcagtgcaaagagag
gcatccagagctgtacacagcaaccctggaaacccctctctgtggtccctgctgtccaga
cttgtaccacaataccacccaaagaaggcaaatggcggagcgatggctggtcaggtcgcc
tgtctctccagtatgacccaaggaaagagggcgctgttgtacagtggagttaaccagctg
gctagtgggagacactctggagaggacagtcacaggaatgcactgaagactatgcagaga
gcagtgcttctctgtcctgatgatccaggaacgtgggcgggattaatggctgcctgtcac
acagaaaacacttcctgttatctctcggcttctgctcctcgcaaacaagcactggagcaa
accctcatgtccgtggtttctgagaaagtgcataatgtggaagagatagagcgccctctt
gcccagactcttgaaggctgggtactacagcaggcagtgactggtctcatgcttgggggg
cagctagatcaggcagaagccctctgcactcaggtgctgaatgtttctccagaacaccca
gcagttatgctgtcgctgagacaggtgcagtgtcagcgcctgcttgttgccaacaatggt
actgtcctcccagactctgtgctggagcagctgaacaacactgtgatgctgaaccccacc
aacgttggggcatggcattggctggctgaggtgtatcgtagccagggcctgctggtccag
gcagtcatggcgtacaggcggagtctgcagctcgcctcacagctcggcgtgcacagcagc
caggtagccagcctgctccgtctagccctgctggctctagaaccctgcatggcgggcctt
cctggaaacgactggacagacctgattttagaagccaccactgaggtcttaaagttgggt
tcatcgccaatggccctccttttccaggccctgctccagtttgtgaccaagatggctgct
agggaaaccagacgtttgttggagaggctggtgtacgttccctctcaaggcttcccagtg
acagtggtgcaggtggccagctggtacctcctcagacacttgcatgccaagaacgaccag
gagctaatgaatgttctgttgcaacaagccaaaatgaatgaagatcaaagactgctggag
tttcattcactgcttgcctcctcttcatcctga
DBGET
integrated database retrieval system
