Semicossyphus pulcher (California sheephead): 138610222
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Entry
138610222 CDS
T10596
Symbol
top3b
Name
(RefSeq) DNA topoisomerase 3-beta-1 isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03440
Homologous recombination
spul03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
138610222 (top3b)
03460 Fanconi anemia pathway
138610222 (top3b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
spul03032
]
138610222 (top3b)
03400 DNA repair and recombination proteins [BR:
spul03400
]
138610222 (top3b)
Enzymes [BR:
spul01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
138610222 (top3b)
DNA replication proteins [BR:
spul03032
]
Eukaryotic type
DNA Topoisomerases
138610222 (top3b)
DNA repair and recombination proteins [BR:
spul03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
138610222 (top3b)
FA (Fanconi anemia) pathway
138610222 (top3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
138610222
NCBI-ProteinID:
XP_069539040
LinkDB
All DBs
Position
Unknown
AA seq
857 aa
AA seq
DB search
MRTVLMVAEKPSLAQSIAKILSKGSCSSRKGLNGACSVHEYTGSFQGQSVRFKMTSVCGH
VMSLDFIGKYNNWDKVDPAELFSKAPTEKKEANPKLSMVKFLQVEARGCDYVVLWLDCDK
EGENICFEVLDAIQPVMNKGSVREQSVYRAKFSSITDTDIWNAMNRLGEPNRNEALSVDA
RQELDLRIGCAFTRFQTKYFQGKYGNLDSSLISFGPCQTPTLGFCVERHDKIQSFKPETY
WVLQVKVFKGKETPLTLDWNRVRVFDREVGQMFANLAKTSKEAQVESVSKKEKAKQRPQA
LNTVEMLRVASSSLGMGPQHTMQIAERLYTQGYISYPRTETTHYPENFDLKGALKQQSNN
HMWAEEVKALLSAGLNRPRKGADAGDHPPITPMRAASEAELGSDGWRLYEYITRHFIATV
SHDCKYLQTTIDFSIGTEAFSCSGKTLISPGYTAVMPWQGIPLEEAMPVCERGDTFTVDE
IKLVEKQTSPPDYLTEAELITLMEKHGIGTDASIPVHINNICQRNYVTVENGRKLKPTNL
GIVLVHGYYKTDAELVLPTIRSAVEKQLNLIALGKANFQQVLQHTLDIFKRKFHYFVDSI
PSMDELMEVSFSPIAATGKPLSRCGKCHRFMKYIQAKPSRLHCSHCDETYSLPQNGAIKL
YKELRCPLDDFELVLWTSGSRGKSYPLCPYCFSNPPFRDMKKGMGCNECTHPSCQHSLNS
LGIGQCVECDSGVLVLDSTSGPKWKMACNKCNVVVHFFEHAHRVQVAQESCDACDASLVA
VDFNKTRTPLPAGETQHTGCVFCDPVFQDLVELKHATMRHAMHRGGGARRGRGRGRGRRG
NPKKPKDKMAALAAYFV
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgaggactgttttgatggtggcagagaagccatccctggctcagtcgattgcaaaaatc
ctctctaaaggaagttgcagcagtcggaaaggactcaacggagcatgctccgtgcacgag
tacaccggcagcttccagggccaaagtgtacgctttaagatgacttcagtttgtggacat
gtgatgagtctggatttcatcgggaagtacaacaactgggacaaggtggaccccgcagaa
ctcttcagcaaagctcctacagagaagaaggaggcaaaccccaaactcagcatggtcaag
ttcctccaggttgaagccagaggctgtgactacgtggtactatggctggactgtgataag
gagggcgagaacatctgttttgaggtgttggatgccatccagccagtgatgaacaagggc
agtgtcagggagcagagcgtttaccgcgccaaattcagctccatcaccgacactgacatc
tggaacgccatgaaccgcctgggagaacccaatcgcaacgaagctctgtcagtggacgca
cgtcaggagctggatctgcgtatcggctgtgccttcaccaggttccagacgaagtatttc
cagggtaaatacggaaacctggactcctccttgatctcatttggtccctgtcagaccccg
acactgggcttctgtgtggaacgacatgacaagatccagtccttcaaaccagagacgtac
tgggtcctccaggtgaaggtgttcaaaggaaaggagactccactgacgctggactggaac
agggtgagggtcttcgacagggaggtgggtcagatgttcgccaacctggccaagacatcc
aaggaggcccaggtggagtctgtgagtaagaaggagaaggccaagcagaggcctcaggcc
ctgaacacagtggagatgttgagagtggccagctcttctttaggtatgggtccccagcac
accatgcagatcgcagagcgcctgtacacacagggctacatcagctaccctcgaactgag
acgacccactatccggagaacttcgacctgaagggggctctgaagcagcagagcaacaac
cacatgtgggcagaagaggtgaaggctctgctgtcagctggattaaaccgacccaggaaa
ggagctgatgctggagaccacccacccatcacccccatgcgtgcagcctcagaggcagag
ctgggaagtgacggctggcggctgtacgagtacatcacacgccatttcatcgccactgtc
agtcatgactgcaaatacctgcagaccaccatagacttcagcatcggcacggaggccttc
tcatgcagcggcaaaactctgatatcaccaggttacacagcggtgatgccgtggcagggc
atccctctggaagaggccatgccagtgtgtgagcgtggagacactttcactgtagacgag
atcaagctggtggagaagcagacgagtcctcctgactacctgacagaggccgagctcatc
accctcatggagaaacatggcatcggtaccgatgccagcatcccagtccacatcaacaat
atctgccagaggaactatgtgactgtagagaatgggcgcaagttgaagccaactaacctg
ggaatcgtcctggtacatggctactacaagacagatgcagagctggtgctgcccaccatc
cgcagcgctgtggagaagcagctgaacctgatcgctctgggtaaagccaactttcagcag
gtcctgcagcacacgctcgatatcttcaagaggaagtttcactattttgtcgactccatc
cccagtatggacgagttgatggaggtctccttttcacccattgctgcaactgggaagccc
ctgtcccgctgtggaaagtgccaccgcttcatgaagtacatccaggccaagcccagccgg
ctccactgctcccactgtgacgagacctacagtctcccccagaacggagccatcaagctg
tacaaggagctccgttgtccactggatgactttgagctggtgctgtggacctccgggtct
cggggaaagagctaccctctgtgcccctactgcttcagcaacccacctttcagggacatg
aagaaaggtatgggatgcaatgaatgcacccatccgtcctgtcagcactctttgaactcc
cttggcatcgggcagtgtgtggagtgtgacagtggggttctggtgctggactccacctct
ggaccaaagtggaagatggcctgtaataaatgtaatgtggtcgtgcacttctttgaacac
gcacacagagtgcaggttgcacaggagagctgcgacgcctgtgacgcctctctggtcgct
gtggacttcaacaagactcgcactccacttcctgctggagagacccaacacaccggctgt
gtcttctgtgatccggtcttccaggatctggtggagctcaaacacgccaccatgaggcac
gccatgcaccggggcgggggtgccaggagaggacggggacggggcagaggacgccgtggc
aaccctaaaaaacccaaagacaaaatggctgccttggcagcttactttgtataa
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