Semicossyphus pulcher (California sheephead): 138610600
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Entry
138610600 CDS
T10596
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
spul03000
]
138610600 (hnf1a)
Transcription factors [BR:
spul03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
138610600 (hnf1a)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
138610600
NCBI-ProteinID:
XP_069539490
LinkDB
All DBs
Position
Unknown
AA seq
559 aa
AA seq
DB search
MEERIDERAKLRPSRLTALQEQLIYALLGSGLSRDVLVQALGELERDRASAGAERGERGD
GESSEEGEMDFPPPIFRELEKLSPEEAVKLRAEVDQLLQGDPWHVAKMVKSYMQQHNLPQ
REVVESTGLNQSHLSQHLNKGTPMKNQKRAALYTWYVKKQCEISQQFTNAKHGLASGEEQ
GEETKKGRRNRFKWGPASLQILFHAYERQKNPSKEEREGLVEECNRAECLQRGVSPSQLA
GLGSNLVTEVRVYNWFANRRKEEAFRHKLALDTPYANQSASHSNLPPSPEHVIKYSHQIL
CDTVSSARGGGGERVGRLVVSPVQLEPSHTLLETHNPKHASSSGPLPPVSTLTSLHSLSA
APASSQSLIMASLPSVMSLGESSLLIGLAPGQPQTVPVINNVGGGFTTLQPISFQQQLHG
SPQQPLCQQLHTHMGANPFMATMAQLPCHMYNKSDSPQYHPSSLLSQAMVIADGSSLGTL
TSLATVRQILTADPEEQTDPPLQEDSLHLQPHTPVPASSESLELYPTSQSTESHQSHLLS
PSPTDISSYIPTQMVSTAQ
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggaggagaggatagacgagagggccaagctaaggccgagccgtctgactgccctgcag
gagcagctgatctatgccctgctggggtctggtctgtcccgggacgtcctggtccaggcc
ttgggcgagctggagcgagacagggcaagcgctggcgccgagaggggagagaggggggat
ggagagagttcagaggagggagaaatggacttcccaccgcctatattccgagagctggag
aagctttcccccgaagaggcggtcaagctgagggctgaagttgaccagcttctgcaaggg
gacccctggcacgttgctaaaatggtgaagagctacatgcagcagcacaacctccctcag
agagaggtggtggagtcaacaggactcaaccagtcccacctctcgcagcacctcaacaaa
ggcacgcccatgaagaatcagaagagagccgctctgtacacctggtacgtcaagaagcag
tgcgagatcagccagcagttcaccaatgccaaacacggccttgcatctggggaggagcag
ggagaggaaaccaagaagggacgaaggaacaggttcaaatggggtccagcatccctgcag
atcctcttccacgcctacgagcgacagaagaaccccagcaaggaggagagagaggggtta
gtggaggagtgcaacagggcagagtgtctgcagaggggggtctctccctcccagttggct
ggactgggctcaaacctggtgactgaggtccgggtgtacaactggttcgccaaccgccgc
aaagaggaggccttcagacacaaactggccctggacacaccttatgccaaccagtctgcc
tctcactctaatctcccaccaagtcctgagcacgttataaaatacagccaccagatcctg
tgtgacactgtgagctcagccagaggcggtggaggagagcgagtgggacgtcttgtggtc
agccccgtccaactggagcccagccacacactcctggagacacacaaccccaaacacgcg
tccagcagtggccctcttcctcctgtaagcactctgacctccctgcacagtctgtctgcc
gcccctgcttcctcacagagcctcatcatggcctccctccccagcgtcatgagcctgggg
gagtcctcgcttctcatcggtttagcccccggccagcctcagaccgtgcccgttatcaac
aatgtcgggggaggtttcaccaccctgcaaccgatctcattccagcagcagcttcacggc
tcgcctcagcagccgctttgtcaacagctccacactcacatgggggcaaaccccttcatg
gccaccatggcacagctcccatgtcacatgtacaacaagtcagactcaccccagtaccat
ccatccagtctgctgtctcaggccatggtcatcgctgacggtagcagcctgggaacactg
accagcctcgccactgtcagacagatcctaacggcagatccagaggaacagacagaccca
cctttacaagaagactctctgcatctgcagccccacacacctgtgccagcttcctctgag
agcctcgagctgtatcccacttctcagtcgacagagagtcatcagtctcaccttctgtca
ccttcaccgacggacatcagctcctacattcctacacaaatggtgtctactgcacagtag
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