Semicossyphus pulcher (California sheephead): 138610986
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Entry
138610986 CDS
T10596
Name
(RefSeq) RNA exonuclease 1 homolog
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
138610986
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
spul03009
]
138610986
Ribosome biogenesis [BR:
spul03009
]
Eukaryotic type
Pre-60S particles
RNases
138610986
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EloA-BP1
RNase_T
Chal_sti_synt_N
DUF2524
Sec6
Motif
Other DBs
NCBI-GeneID:
138610986
NCBI-ProteinID:
XP_069539984
LinkDB
All DBs
Position
Unknown
AA seq
1205 aa
AA seq
DB search
MFPSSGLFVNINCPFTKRGLCERPHCFYKHATELWDMFGASHKSSVVDFAGVQNGYPYAA
REAPVNDETKDDCLQQLEWINKEIETVRHEVEQEQRRLSHYQTVQADGRNTVASSPLSES
ETAGKNLDNSSGLSSCTKLKKTYSRARKYVVDNSKPRTDLEYDPLSNFSADLRSYSSSGK
EQKVKSRRGLKNTRNAVPGVKKRRINYQAPLSRSPSPDPLDESNEDCVLIIDIPHSPDKK
RRKGQKAVDSVAGQSIQDKIEELKEVKTASIFLDSPPLHLSKTGACKATSSPASKLKDNR
VHSNCCAENNPSNLCENKDCEHLVNESVVYSTRCLEDLGRESQKITHSQAAETSVDKSPE
SAYPPATTDQQDHSLNYQVEKKEKNAIKAELRRCELPDSVDRMNLQAYNYQPKNSLFYQP
PEVKSDSPNRQHTKQAQTTEKPAQNKVDNQFHSPKCLPSLLPQSQKTSSKVPTEMQGKTA
SGSSKDQIRNNFSASSRAESSSASSELLLVKADGEEVIIIDSSSDGEDELNYSEMELSDS
DPMEECYRIFMEANNEDKGHDGEPDVSVEAADLEKSELNVKPQALLGKKRVAHEAKHTEP
VAKSRPQPQVLVPLHGPAVSGFTSQPSITTKIQQVQQRASILTASVKGGQAFVSSTCQRK
PETQNAPSPSTQTPENLQPAPAQNAYVNYIPLGTAVINVGNNLHLILPEGAFPLPVASSS
SQLTSVLTPITQVHMNPVTVKQTYHQAVLTPVQRYRTTAPMLIPPQARKPSLTSALAAAQ
SSQAACVTQAALHANVKPVPTKRKLKQQCEAAKVPHDIRQRYINMFTEEFLKTSANVNDA
FEKALAEEKTLYNRSVNKLKYLSVAVNALKRLKNQSAVAAKVENEVNSQRCKGNIPLNMK
LFEGKTDDTLFYESLKDYILTEERLIESNYPVQHPEKPGSAVFFADHKKGHADPLKRICC
RCGATYSVSQTGKHTRKEECNYHYGKGVKNKVPGGVETRYSCCEGVMGAPGCQVFKLHVH
DSLSLDGFVSTVPRHHSDTSCPGVYSLDCEMCYTIHGLELSRVTVVNSSLQVIYDTFVRP
DNEVIDYNTRFSGISEEDVKGNHTSLREVQETLLSFINADSILIGHGLETDLCALKLLHG
TVVDTSVVFPHRLGPPHKLTLNNLTAEYLRRIIQESVCGHDTAEDAAACMELMLWKVKED
GKMRK
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atgtttccctcgtctggtctttttgttaatataaattgtcctttcaccaaacgtgggctt
tgtgagcggccgcactgtttttacaaacatgccacagaattgtgggatatgttcggtgct
tcgcataaatcatcggtagtagactttgcaggagtccaaaatggctatccatacgctgcc
cgtgaggcaccagtgaatgatgaaaccaaagatgactgcctccagcagcttgaatggatc
aacaaggagattgagactgtaagacacgaggttgagcaggagcaaaggcggctgtcacac
taccagactgtacaggcagacggcagaaacactgtcgctagttcccctctttccgaatct
gaaacagcaggtaaaaatttggacaattcttctggtctgtcttcatgtacaaagttaaaa
aaaacgtactcccgggcaaggaagtatgtggttgataattcaaaaccaaggactgatttg
gagtatgaccctctgtctaacttttctgctgacttgcggtcttacagctcatcaggtaaa
gagcaaaaagtcaaaagcagacgaggtttgaaaaacacaaggaacgctgttccgggtgtc
aaaaaacggagaataaattatcaggctcctctttctcgatcgccatctccagatccactt
gatgagtctaatgaagactgtgtactgataattgatattcctcactcacctgacaaaaaa
agaaggaaaggtcagaaagctgttgattctgttgctggccaatctatccaggataaaata
gaggaattgaaggaggtcaaaacagcatccattttccttgattctccaccactgcacctt
tcaaaaactggagcgtgcaaggctacatcttcccctgcatcaaagttaaaggacaacaga
gttcatagtaattgctgtgctgaaaacaatccatctaatctttgtgagaacaaagattgt
gaacatttagttaatgagagtgttgtttactctactagatgtttagaagacctgggaaga
gagagtcagaaaattactcattctcaggctgctgaaacatcagtggacaaaagtcctgaa
tctgcatatcctcctgccaccacagaccagcaagatcacagtttgaactatcaggtggag
aaaaaggagaaaaacgctatcaaggcggaactacgtcggtgtgagcttcccgatagtgtt
gacagaatgaatctgcaggcttacaattaccagccaaagaattcacttttttatcaacct
cctgaggttaagtcggattcaccaaacaggcaacatacaaagcaagcacagaccacagag
aagccagctcagaacaaagtggataatcagtttcattccccaaaatgtttaccttcactg
cttccacaaagccagaaaacgtcaagcaaagtgcccacagagatgcaaggtaaaactgct
tcaggcagcagcaaagatcagattcggaacaatttttcagcatcaagtagagctgaatca
tcatctgcatcaagtgagctgcttctggtgaaagcagatggtgaagaagttataatcatt
gattccagctccgatggcgaagatgagctcaactattcagaaatggagctgtctgacagt
gacccaatggaggaatgctacaggatcttcatggaggcaaacaatgaggataagggacat
gatggggagcctgatgtttctgttgaagccgcggatctggagaagtcggagttaaacgtc
aaacctcaagcattgctaggaaagaagagggtcgctcatgaagccaaacatacagagcca
gtggctaagagcagacctcagcctcaggtgctggttcccttacatgggcctgcagtgtca
ggatttacttcccagccctccatcaccaccaagatccaacaggtacagcagagagcctcc
attctgactgcctcagttaaaggcggtcaggcttttgtttcctccacctgtcagaggaag
ccagagacccagaatgcaccttctccctcaactcaaacacctgaaaacctgcagcctgct
cctgcgcaaaatgcttatgtgaactacatacctttaggaacagcggtgataaatgtgggc
aacaacttgcacttgatcctcccagagggcgctttccctctgcctgtagcttccagttcc
agccaacttacttcagtgctaactccaatcactcaagtgcatatgaaccctgtcactgtg
aaacaaacataccatcaagctgtacttacccctgtgcaaagataccgtacaacagcacct
atgctcatcccaccccaggcacgcaaaccctcactgacctctgctcttgcagcagcacag
tcaagtcaagccgcctgtgttactcaagctgctctccatgctaatgttaagccagttcca
actaaacgcaaactgaagcagcagtgtgaggccgccaaagtgccccatgacatccgacaa
cgttatatcaacatgtttacagaggagttcctaaaaacatcagccaatgttaatgatgcc
tttgaaaaggcacttgctgaagagaagacgttgtataatcgcagtgtgaacaaactcaaa
tacctgagcgttgcagtgaatgcactcaagaggctgaagaaccaaagtgctgtggctgct
aaagttgaaaatgaagtgaacagccaaagatgtaaaggcaacattccacttaacatgaag
ttgtttgaaggaaaaacagatgatacattattttatgagagtttgaaggactatattttg
actgaggagaggctgattgagagcaactatcctgtacagcacccagagaaacctggttct
gcagtattttttgctgaccacaagaaaggccatgcagatcccctcaagaggatctgctgt
cgatgtggggctacgtactctgtgagccagactggcaaacacacccgtaaggaggagtgt
aattaccactatgggaaaggcgtcaagaataaagtgccgggtggagtggagacacgctac
agctgctgtgagggagtgatgggagcacctggatgtcaggtgtttaagttgcacgtacat
gattccctcagccttgatggatttgtgtcaactgtccccagacatcactccgacacaagc
tgtcctggagtctactccctcgattgtgaaatgtgttataccattcatggtctggagctg
tccagggtgactgtggtcaactctagcctgcaagtcatctatgacaccttcgtcagacct
gataatgaggtcatcgactacaacaccaggttttcaggcatcagtgaggaagatgtgaag
ggtaaccacacctccctcagagaggtgcaggagaccttattgagcttcataaacgccgac
agcattctgattggacacggcctggaaacagacctctgtgccctgaagttgctccatggg
acggtggtggacacatcagtggtcttcccccaccgtctgggcccccctcacaagctcacc
ctcaacaacctcactgctgaatatctcagaaggatcatccaagagagtgtttgtggacac
gatactgcagaggatgctgctgcctgcatggagcttatgttatggaaggtcaaagaagat
ggaaaaatgagaaaatga
DBGET
integrated database retrieval system
