Semicossyphus pulcher (California sheephead): 138611103
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Entry
138611103 CDS
T10596
Symbol
chd7
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 7
KO
K14437
chromodomain-helicase-DNA-binding protein 7 [EC:5.6.2.-]
Organism
spul Semicossyphus pulcher (California sheephead)
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
spul03036
]
138611103 (chd7)
Chromosome and associated proteins [BR:
spul03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
138611103 (chd7)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
Helicase_C
BRK
Chromo
ResIII
DEAD
Chromo_MIT1
HTH_Hrp3
HDA2-3
Myb_DNA-bind_7
MUN
Motif
Other DBs
NCBI-GeneID:
138611103
NCBI-ProteinID:
XP_069540130
LinkDB
All DBs
Position
Unknown
AA seq
3318 aa
AA seq
DB search
MADPGMLSLFGEDAGLFSDGLDGLGDCFPQQPTPAQSNPLAQQTNPSLNHEHQGNRGYHQ
GMIHGAGPGPGQPKLGQMYDHSSYTGYEQPGAPGGRVMAQNGPSQGPQNPAMNGIASHYH
NNPANSTNPNHGYQGDAGGGGGGGGVWGQQQQQSRTAYQQPPTQPGGGPNQIGGYQMSQG
NYGGMQGPPTPNAARINQHYPPSGIAPPTAQDPSHYLGHVGIGGGQMRHPQPQPQPQSQG
YPNMGHTPRYPHSPSRQPPHPHQHQQGMGGFGGGQYSGFQAQYGAMGPGIGQGTNANINA
NTSQAMGPGQLSQRFNQGSGPAAGQQGQRYPPGPPHQTHSAQMQQQQQGGQQGQPMHPLN
HPQNLPQTQNQPHLAPPAQGSYPSPSSMSPMRVLGTPTPPLQQGRPPSAGLPGPQEVAGY
TSLQTPPNAMPHPQRNPQTPLSAQHQQPHNMPPNAGQMYPGMGQQRAPQLAPIRPQLQQG
PLEAPVSQGGDQRVLQAQQQASRSGQPLQSNPMGFQGSSVSQHGVPTPNQALAAPAQNAQ
KQHTHLPPHAQHLQSTPPPPNQASHAWAPQPPASHPLSSPPLTPQKVPHVQHSPTDPSGD
ASMMIPDRPTVGTGTPGQPISTEQPSNQETKPKKKRKKKAKVVDGEEEEGGTQAGGEEVK
SECPTTGSDAGEQVTGTGIVDESSPPVEEKKKRKKKPKEKAEGKELKEPKTQKTPKTPKT
PKEPKESRDKKNKSSTPKTKTPKKTSSKKVETEGGPSTAKKDSKRKREPSVSDDVEVKSP
PPSPHEDEDDDGVQKRRSSRQVKRKRYTEDLEFRISEDDDSGDDSPAPKSPSSQQQDVEV
EGPVVEKIMGIRTTKKQPEEGEEVEVEEFYVKFKGFSYLHCRWADLEELEKDKRIHQKVK
RFRAKQQLNSFITEMDDEPFNPDYVEVDRVLDISESTDENGEMVTLYLVKWCSLPYEDST
WELKADIDQSKIEEYECIAARTPNTKRVDRPPAADWKKLEGSREYRNSNALREYQLEGLN
WLTFNWYNSRNCILADEMGLGKTIQSITFLYEIYMKGIEGPFLVIAPLSTIPNWEREFRT
WTELNAVVYHGSQASRKTIQAYEMYYRDAQGKIIKGAYRFHAVITTFEMILTDCPELRSV
PWRCVVIDEAHRLKNRNCKLLEGLKMMDMEHKVLLTGTPLQNTVEELFSLLNFLEPERFP
SEQTFMTEFGDLKTEEQVQKLQGILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKY
YRAILEKNFSFLSKGGAGGGGGGGGGGGGGSSVPNLLNTMMELRKCCNHPYLINGAEEKI
AEEFREFHGGRTDLPDMALQAMIQAAGKLVLIDKLLPKLKAGGHRVLVFSQMVRCLDILE
DYLIQKRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAADTCII
FDSDWNPQNDLQAQARCHRIGQSKAVKIYRLITRNSYEREMFDKASLKLGLDKAVLQSMS
GRENANSGVQQLSKKEIEDLLRKGAYGALMDEEDEGSKFCEEDIDQILQRRTHTITIESE
GKGSTFAKASFVATGNRTDISLEDPDFWQKWAKKAELDLDAINGRNTLVIDTPRVRKQTR
HYSSVKEDEMLEFSELESDEDEPSKPSTKPRRPQDKTQGYPRSECFRVEKNLLVYGWGRW
GDILNHGRFKRPLKESDVETICRALLAYCLLHYRGDENIKSFIWDLITPSEDGTTKTLTN
HSGLSTPVPRGRKGKKGKPLAPPPQTPRADWLASCNPDHLLQEDSYKRHLKHHCNKVLLR
VRMLYYLRQEVIGDQAERTLEGADSSELDIWIPQPFHAEVPADWWDSEADKALLIGVFKH
GYEKYNSMRADPALCFLERVGMPDAKAIAAEQRGSDMMADGVEGEDEDPEYKPLRMPFKD
DMDDFTNSPLDDKDETVEGEAEAKSGESVPPLGRASGSSERLYWPAASALTARLRRLITA
YQRSNRREQLRQEALNRPDGRRRRRREFLPSIAMVTETGGGAAYIHNGAGVFMTEGSPYL
AKGSAYFAKGAQFNPEASPVVTASSLMADGAMYYKERRQRWTRREEADFYRVVSTFGVVF
DTQHQKFDWTQFRAFARLDKKTDESLEKYYYSFIAMCKRVCRMQVKTEIELPDPTLIIDP
ITEERASRTLYRIELLRRIREQVLPHPQLSERLKLCQPSTDLPEWWECGRHDRDLLLGAS
KHGVSRTDYHILNDPTLAFLEAHQRFTSHRGTGVGMGAHGEITKVTVGAVESTPAPLLTP
AELASAEAAAKIALNATKEEDGGEETEVKIEEAKADIEMKMETEEGDIPCTKNPLQTPDD
QKKNEGEFREVKDEVTASTSKEVKKEEEALTKVEKEEHSGEGDITSKQADDQEKGVTEEK
KSLTPVDTLRDEKETAAELLALPDSSPKAQPDNKTAEEEDGEDRENPESPKSLKSADTEK
SPEEEEEERMDEDDKSEKSSQAEASAASEQKNFDEESIASLSTSAQNETRDGFCPDDLPE
NSALQALQERAYGFSFWPKDRVMINRMDNICEAVLKGKWPVNRRHIFDFPSNMLPGHGST
VTTAAVAMTTESPLQRRSLAELTMAGVHTPYSGSEEKTPLPQVHDDALSLTVPRQRRRRR
RKIEIEAERAAKRRNLMEMVAQLRESHAAAETQSHAIDLTKGMHHRHKASPSLAGFPSAL
VTSPSLKAQMELLQQAPPSGHRANGSLEADLPIMRRRRGRRKNVEGLELLFMGNKRAGGD
DAEETKISGVEGAQGVSHAHRSRTVPEQSPSARSLASGSLEEDEAAVSNKELGEWLRQHP
TYTLDMAGFTPKSEDLLLSQFSKPKQKRHRCRNPNKIDINTLTGEERVPVVNRRNGRKMG
GAMAPPMKELPRWLLENPEFSIAPDWTDIVKQSGFLPEAMFDRLLTGPVVREEGVRRRGR
RPKSEIAKAAAAAQAAAVAQAAQASLATAASSAGGINPLLLNSLFGGMDLSSLQSLQSLQ
LAAGLMAFPPTDPKQAAANAAAASMLPLMLPGMGGLPNMAAALPNMFSLGGLFGGNLAAA
AAAASNSTAATASGNTNGTMEEENNETVTKRKEEERNEDCDEVGDDEEEEMEAEGNEGVK
KKKKKMEKGNEGGSEKKEKSVKNVNSTPQIPAADSSAEASINGDAAALLAAAGMSANSLA
FNPFLLSTMAPGLLYPSMFLPPGLGGISLPGFPTASTLAELQSVMAGALGGSVLTTNPPR
DQEEKKGVLKATREDEEEEEEEEEEEVEEEEEGGDSDLAEDKEGGTDEMRDEDSALEDGR
TGGEEAAAAVSPQKDKSD
NT seq
9957 nt
NT seq
+upstream
nt +downstream
nt
atggcggatccagggatgttgagtctattcggggaggatgcagggctgttctcagatgga
ttagatggtttaggagactgcttccctcagcagcctacccctgcccagtcaaaccctcta
gcccagcagaccaatccctctctaaaccatgagcaccagggaaacaggggttaccaccaa
gggatgatccatggtgctgggcctggcccagggcagcctaaattgggccaaatgtatgat
catagctcctacactggttatgagcaacccggggcccctggagggcgagtgatggcccag
aatggtccaagccaggggccgcaaaaccctgccatgaatggcatcgcttcccactaccat
aataacccagccaactctaccaaccccaaccatgggtaccagggtgatgctgggggagga
ggaggtgggggtggagtttggggccagcagcagcagcaaagtagaactgcttatcagcag
cctccgacacaaccagggggtggccccaaccagataggaggataccagatgtctcaaggc
aactatggtgggatgcagggtccacctacacccaatgcagctcgcattaaccaacactac
cctccatcgggcattgcaccccctactgctcaggacccatctcactacctgggacatgtt
ggaattggtgggggccagatgagacacccccagccacagcctcagccacaatcccagggg
tatcccaacatgggccacacaccccgatatccacactccccctcccgacagcctccacac
ccccaccaacaccaacagggtatgggggggtttgggggaggccagtactctggctttcag
gctcagtatggagccatgggacctggaattggccagggtactaatgctaacatcaatgct
aacaccagccaggccatgggaccagggcagctcagccagaggtttaaccagggatcgggc
ccagcagcggggcaacaggggcagcgatacccccctggaccaccccatcagacccattct
gctcaaatgcagcagcagcagcagggcgggcagcagggccagcctatgcacccccttaac
cacccccagaatctgccccagacccaaaaccagcctcaccttgcacctccagctcaggga
tcttacccctccccctcatccatgtcccccatgcgggttttgggaaccccaacacctcct
ctccaacagggaagaccccctagtgcaggacttcctggaccccaagaggttgcagggtat
acatccctgcagactccacccaatgctatgccccatccgcagagaaatccccagacgcct
ctgtctgcccaacaccagcagccccacaacatgccccccaatgcagggcagatgtatcct
ggcatggggcagcaaagagctccacaattggctccaatcaggcctcagctccagcaaggg
ccacttgaagctccagtaagccaggggggagaccaacgtgttctccaggctcagcaacag
gcctctcggagtgggcagcccctgcagtccaatcccatgggattccagggttcatctgtc
agtcaacatggagttccgaccccaaatcaggcgttagcagctcctgctcagaatgctcag
aagcaacacacacacctgcccccccatgcccagcacctgcagagcacgccccctcccccc
aaccaggcctcccacgcttgggcgcctcaacctcctgcctcccacccgctctcctcaccc
ccacttactccacagaaagtgcctcacgtacagcattccccaactgacccatcaggagat
gcctcaatgatgattcctgacaggcccacagttggcactggtacccctggccagcccatc
agcacagagcagcccagcaaccaggagaccaagccaaaaaagaagaggaagaagaaagca
aaagtggtagacggagaggaagaagagggagggacacaggctggaggagaagaagtcaag
tcagaatgtcctacaacaggaagtgatgcaggtgaacaggttactggcacagggattgta
gatgaaagttcgccaccagtggaggagaagaaaaagcgcaaaaagaaaccaaaggagaag
gcagagggcaaggagctcaaagagcccaaaacccagaagacgcctaaaacccccaaaacc
cccaaagagcccaaggagtccagggacaagaaaaacaagagctcaacacccaagaccaag
acccccaagaaaaccagcagtaaaaaggtcgagactgagggtgggcccagcactgctaag
aaggattcaaagaggaagagagagccatcagtcagtgatgatgtggaggtgaagtctcca
cccccctcacctcatgaagatgaagatgatgatggtgttcagaagcgtcgctccagccgt
caggtgaagaggaagaggtacaccgaggatctggagttcagaatctcggaggacgatgac
agcggagatgactcgccagcacctaagtcaccatcttcccaacaacaggatgttgaggtt
gaagggcctgtcgtggagaagatcatgggcatacgcaccaccaaaaaacagccggaggag
ggtgaggaggtggaggtggaggagttctacgtcaagttcaagggcttttcgtaccttcac
tgtcgctgggcagacctggaggagctggagaaggacaagagaatacatcagaaggtgaag
aggtttagggccaagcaacaacttaacagcttcataacagagatggatgatgaacctttt
aacccggactatgtggaggtggaccgtgtcctagacatttcagagagcactgatgaaaac
ggagagatggtgaccttatatttggtgaaatggtgcagtctgccctacgaggactccacc
tgggagctgaaggccgacatcgaccagtccaagatagaggaatatgaatgcattgcagca
cgcacacccaacactaagagagtggatcggcctcctgcagccgactggaaaaaattggag
ggctcgagggaatacaggaacagcaacgcactcagggaataccagctagaaggcctcaac
tggctaaccttcaactggtacaactcacgtaactgtatcttggctgatgagatgggtctg
ggaaagaccatccagtctatcacattcctatatgagatttacatgaagggcattgagggg
ccattccttgtcattgccccactctccaccatcccaaactgggagagggagtttaggacc
tggaccgagctcaacgcggtggtctaccatggcagccaggccagccgcaagaccatccag
gcttatgagatgtactacagagatgcacagggtaagataataaagggagcgtatcggttc
cacgcggtgataacaacctttgagatgattctgactgactgtccggagcttcgcagcgtg
ccgtggcggtgtgtggtcatagacgaggcccaccgcctcaaaaaccgaaactgcaaacta
ctggaaggactcaagatgatggacatggagcacaaagtgctgttgacaggaactcccctc
cagaacaccgttgaggagctttttagcttactcaacttcctggagcccgagcgtttcccg
tcggaacagacattcatgactgaatttggagaccttaagactgaagaacaggttcagaaa
ctgcagggcattctaaagcccatgatgttgagaagactgaaggaggatgtggagaagaac
ctggcacctaaagaggagaccatcattgaggtggagctaaccaacatccagaagaaatac
tatcgggccatcctggaaaagaacttctccttcctgtccaaaggaggtgcaggaggagga
ggagggggaggaggaggaggtggcggaggatccagtgtccccaacctgctcaacaccatg
atggagctgagaaaatgctgcaaccacccctacctcattaatggagcggaggagaagatt
gctgaggagttcagagaattccacggtggtagaacagacttacctgatatggccctccaa
gccatgatccaggctgctggcaagctagtgctcattgacaagctactgcccaaactaaag
gccggtggacacagagttctcgtttttagtcagatggtccgctgtctggatatcctggag
gactacctcatccagaaacgatatccctatgaacggatagacggcagagttcgtggaaat
ctgcggcaggcagctatcgaccggttctccagaccagactcagaccggtttgtcttcctg
ctgtgtacgagagctggaggactcggcatcaacctgactgcagcagatacttgcatcatc
ttcgactctgactggaatcctcagaacgacttacaggcccaagctaggtgtcatcgtatt
ggccagtccaaggcagtcaagatctaccgtctgatcacgaggaacagctatgagagggag
atgttcgacaaggccagtttgaagctcgggctagacaaagccgtcctccagagcatgagt
ggacgagagaacgccaacagtggggttcagcagctgtctaaaaaggagatcgaagacctt
ctgagaaagggagcatatggagctctcatggacgaggaagacgaaggctcaaaattctgt
gaggaagacattgaccagatcctccagcgacgaacccacaccatcactatagagtctgag
ggcaagggatctacctttgcgaaggccagttttgttgcaacgggtaatcgaacagacatt
tctctggaggacccggacttctggcagaaatgggccaagaaggctgagctggacctggat
gccatcaatggacggaacacactggtgattgacacgccgagggtgagaaagcagacgcgg
cactacagcagcgtcaaagaggacgagatgctggagttctcagagctggagagcgacgag
gatgaaccgagcaaaccttcaacgaaaccacggcgaccccaagacaaaacccagggctac
ccccgatctgagtgcttcagggtagaaaagaatctgcttgtctacggttggggtaggtgg
ggggacattctcaatcatggtcgcttcaagcgccccctgaaggagagcgatgtggaaaca
atctgccgggccctcctggcctactgcttgctgcattaccgtggtgatgagaatataaag
agctttatctgggacctgatcaccccaagtgaagatgggacgaccaagacactgaccaac
cactcaggtctctctaccccagtccctcgaggcaggaagggcaagaaggggaagcctctg
gccccgcctccacagacaccacgagctgattggctggccagctgcaaccctgaccactta
ttacaggaagacagctacaagagacacctgaaacatcactgtaacaaggtgttgctcagg
gtaaggatgctgtattatctgcgacaggaagtgataggtgaccaggccgagcgcacgctg
gaaggagcagactccagtgagctcgatatctggattccccaaccgtttcatgcagaggtc
ccagctgactggtgggacagcgaggcagacaaagccctgctcatcggcgtcttcaaacac
ggttatgagaagtacaactcgatgagagctgaccctgccctttgttttttggagagggtg
ggcatgccggacgccaaggctatcgctgctgagcagaggggctcggacatgatggcagat
ggtgtagagggtgaggatgaggatccagagtacaagccactgcggatgccttttaaagat
gatatggatgactttaccaactctccactggatgacaaggatgagactgtggaaggagaa
gcagaagctaaatccggggaaagtgtgccgcctttgggcagagcttcaggctccagtgag
cgactctattggccggcagcctcagcattgacagcccgtttgcgtcgcctcatcacggcc
taccaacgttctaaccgcagagagcagctccgccaggaagccctgaatcggcctgatggt
cgcagacggcgacgcagggagttcctgccttcgattgccatggttactgaaacaggaggg
ggggctgcttatatccataatggagccggggtgttcatgacagaaggaagcccatatctg
gcgaaaggaagtgcttactttgctaaaggtgcacagttcaatccagaggcatcaccagtg
gtaaccgccagctccttgatggctgatggagcgatgtactacaaggaaagaaggcaaaga
tggactcgccgcgaggaggccgacttctaccgtgtagtttccacttttggagtggtcttt
gacacccagcatcagaagtttgattggacacagttcagggcctttgctcgactggacaag
aaaacagatgagagcttggagaagtattattactccttcattgccatgtgtaaacgggtc
tgcagaatgcaggtcaagactgaaatagaactcccagacccaaccctgatcatcgacccc
atcacagaggagcgtgcctcacgcaccctgtaccgcatcgagctgctccgccgcatcaga
gagcaagtcctcccccatcctcagctctcagagcgcctcaaactctgccagccctcaaca
gacctcccagagtggtgggagtgtggccggcatgaccgggacctcctcctgggggcctct
aaacacggcgtgagccggactgattatcacatcttaaacgaccctaccttggcctttctg
gaggcccatcagcgctttaccagccatcgaggaactggtgtgggtatgggagcccatgga
gagatcaccaaagttacagtgggagcagtggaaagcacccctgcacccctcctcacccct
gctgagctggccagcgctgaagctgctgccaaaattgctcttaatgccactaaagaggag
gatggaggagaagagacggaggtgaagattgaagaagctaaagcagatattgagatgaaa
atggaaacagaagaaggagacattccatgtaccaagaatcctcttcaaactcctgatgac
cagaaaaaaaacgaaggagagttcagagaagtgaaagatgaagtcactgcttcaacatca
aaagaggttaagaaagaagaggaggcactgacaaaggtagagaaagaggagcatagtgga
gaaggagatataacttccaagcaagcagatgaccaagaaaaaggcgtgaccgaagagaag
aagagtttgactcctgttgacactctcagggacgagaaggagacagctgctgagctcttg
gcacttcctgactcctctcctaaagcacaaccagacaacaagacagcagaggaggaagac
ggagaggacagggagaatcctgagtctccgaaatctcttaaatcagctgacacggagaaa
agcccagaggaagaggaagaagagaggatggatgaagatgacaaatcagagaaatcctct
caggctgaagcgagtgctgcatcagagcagaagaactttgatgaggagagcatcgcttct
ctgagcacgtcagcccaaaacgagacaagggatgggttctgccccgatgatcttcctgaa
aattctgcactgcaagcattacaggagcgtgcctatggcttttcattctggccaaaggac
cgagtgatgatcaacaggatggataacatctgcgaggctgtcctgaagggcaagtggcct
gtcaatagacgccacatctttgacttccccagcaacatgttgccagggcatggctctaca
gtaaccacagcggccgtggccatgacgacagagagcccactgcagaggcggagcctggct
gagcttacgatggctggcgtccatacaccttacagtgggagtgaagagaagacaccatta
ccccaggttcatgatgatgcactgagcctgacggtgcctcgacagaggaggaggaggagg
aggaagatcgagattgaggcagagagggcagccaagagacgtaacctgatggagatggtg
gcccagctgagggagagccacgctgctgctgagacccagagtcacgctatagacctcacc
aagggtatgcatcatcgccacaaggcctctccctcattagccggcttccccagtgccctg
gtgacaagcccctccctcaaagctcagatggagttgctgcagcaagccccaccctctgga
cacagagccaatggttcactggaggctgacctccccatcatgaggaggaggcggggccgc
agaaaaaatgtggagggcctggagctgctgttcatgggcaacaagagagcaggaggggat
gatgctgaggagactaagatttcaggtgttgagggggctcagggtgtttcccatgcccac
agatcccgaactgtccccgagcaaagccctagtgccaggtcacttgcctctggcagtctg
gaggaggacgaggcagcagtttctaacaaagagctgggagagtggctcaggcagcaccct
acatacacactagacatggctggattcacaccaaagagcgaggacttactgctgtctcag
ttttctaagcccaagcagaagcgccaccgctgtcgaaaccccaacaagattgacatcaac
accctgactggagaagagagagtgcctgtggtcaacagacgcaacggacgcaagatgggt
ggggccatggctccaccaatgaaagagcttccaagatggttactggagaacccagagttt
tctattgcccctgattggacggacattgtcaaacagtcgggtttcctcccagaagccatg
tttgaccggcttctaactggacctgtagttagggaggagggcgtccgtcgtcggggccga
cgaccaaaatctgagattgccaaggcagcggctgctgcgcaggcagcagcagtggctcag
gctgcccaggcatcacttgcaactgcggcatcatctgcaggaggcatcaaccctctgctg
ttgaacagtctgtttggggggatggacctgtcatccctccagagcctccagtctctccag
ttggctgctggtctcatggccttccctccaaccgaccccaagcaggctgctgccaatgcc
gccgctgcttccatgctgccactcatgctgcctggcatgggaggcctgccgaatatggct
gctgccctccctaacatgttcagcctaggcgggttgttcggcggcaaccttgccgctgcc
gcagctgctgcatcaaactccaccgctgccacagcatcagggaacactaacggaacgatg
gaagaagagaataatgagactgtgacaaagaggaaagaagaggagagaaatgaagactgt
gatgaggttggagatgacgaggaggaggagatggaggcagagggaaatgaaggcgtaaag
aagaagaaaaagaagatggagaaagggaatgagggagggtcggagaaaaaggagaaatcc
gttaagaatgtcaacagtactccacagatccctgctgctgattcgtcagctgaggcatcc
atcaatggtgatgctgcagccctgttagctgcagccggcatgtctgccaattctctggca
ttcaaccccttcctcttgtccaccatggcccctggcctcctatacccctccatgttccta
cctccaggccttggggggatcagcctgcctggctttcccaccgcctccaccctggccgag
ctgcagagcgtcatggctggcgcactgggtggcagtgtcttgaccacaaatccccctaga
gaccaggaagagaagaagggggtgttgaaagctaccagagaggatgaggaagaggaagag
gaggaggaggaggaggaggtggaggaggaggaggagggtggagatagtgacttggctgag
gacaaggagggtggcacggatgagatgagagacgaagattcagccctggaagatggcaga
acaggaggagaggaggcggccgcagcggtgtctccacagaaggacaagagtgactga
DBGET
integrated database retrieval system
