KEGG   Semicossyphus pulcher (California sheephead): 138611233
Entry
138611233         CDS       T10596                                 
Name
(RefSeq) collagen alpha-1(IV) chain-like
  KO
K06237  collagen type IV alpha
Organism
spul  Semicossyphus pulcher (California sheephead)
Pathway
spul04510  Focal adhesion
spul04512  ECM-receptor interaction
spul04820  Cytoskeleton in muscle cells
Brite
Exosome [BR:spul04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   138611233
Glycosaminoglycan binding proteins [BR:spul00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   138611233
SSDB
Other DBs
NCBI-GeneID: 138611233
NCBI-ProteinID: XP_069540316
LinkDB
Position
Unknown
AA seq 1682 aa
MGKSVWAVLLILFAVMLMGIGAKNCVCSGKSRCQCEGVKGSRGEKGFPGEQGLPGLEGRP
GSNGHAGPMGPKGSTGPGGPEGPKGDPGPEGKEGFAGSHGLPGIPGLQGPPGAPGAPGCN
GTDGEDGPPGNPGAHGIDGHAGPPGQPGRKGDKGIRGGYGPPGSPGPHGSDGIPGRPGAL
GSKGQGGIGSVRGPRGPKGREGPVGPPGPPGQVKEYVHGSDVLKYSKGDSGDAGEKGCKG
TTGDPGYGSHSKGAKGDKGPDGSEILGFVTEPLKGYPGDPGSLGQPGLPGRQGVVGFPGP
DGPPGQATGSYVPGLQGPPGFPGPKGDPGDPGDRYSGVPGLDGDTGDQGPPGDQGPPGPP
EDRTNRVTKGLSGIKGVKGLPGPLGYDGIYGMKGEKGEPCFECATSGTPGPPGPRGPPGG
PGANRGPGAKGDPGSPGPPGPPGTPGLNGGSGFPGPPGPKGDSSSYHTPGIKGETGDLGQ
PGRPGADGIPGFPGLPGRKGDRGPPGDSYGFPGAEGDHGYPGTPGPTGRPGPVGYPGPEG
YGPAGFPGSKGDFGVLGLPGQPGFPGQKGEPGHIHIRGLPGPPGFKGQPGIPGSPGHQGL
PGTPGIPGFPGQKGEGGDVSYPGRPGNVGPKGDKGEPGSLGLQLGGLPGRPGPQGTPGAP
GLKGDGGPGYSGPQGPPGPPGPDGGQGPGGDPGIPGQPGNPGLTGHPGVPGEKGNKGPVG
PHGLPGDKDSCKGEPGLRGQPGPDGYPGHSGSNGSPGEKGKAGLPGSGRPGAPGDPGLIG
PSVPGPHGLPGLKGSKGQSGLPGQPGLRGDLGPDGISGYGPEGLPGVPGPPGPIGAPGPD
GTRGPPGLQGMEGDPGHRGPAGRSAPPDIISGPPGYPGDPGQPGLPGIHGDPGRIGPPGQ
RGRGGAPGHPGPRGPPGDRARDGPTSEGRPGLPGDPGDPGVAGPSGPKGIKGDQGIPGAV
GRDGAPGPTGPKGVHGEPNYYGYGRPGPMGQKGEPGLNNAHAPKGQKGEPGVFGSPAPPG
FTGAKGNPGPVGLSGPPGYQGHKGSDGPPGGKGRLGPNGPPGNPGNPGGIGYAGPKGHQG
RDGIPGPPGQKGETISTEGTPGRRGETGQQGPSGNPGPPGLTVPSPPGPTGDRGSSGPPG
GSGPRGLPGREGPCVPGSKGGLGRPGTAGGPGYPGPPGPPGPTSPGLKGELGDQGRSGSP
GYGGPPGDPGPQGPPGVRGGPGGPGPRGEFGPPGIQGPPGEKGDPGYNSGPPGPPGIKGF
PGRPGSKGQPAFGEVISVQGDPGFLGPPGNKGATGSSGSSGPPGQPGRPGIKGQRGPGRA
GLPGFTGHKGDKGRSGLPGFEGQPGSPGHKGRPGLPGGVGPGYVDSFLIARHSQSMRIPD
CPPGSSLMYSGYSFLFINGNERAHGQDLGSSGSCLPRFSTMPFMFCDTESNCRYASRNDY
SYWLSTDTPMPANMVAIAGDRLASYISRCSVCEITSNVIAMHSQTTLIPECPRGWESLWT
GYSFVMQTGAGAEGSSQPLVSPGSCLESFRQVPFIECHGRGTCNYYPDSYSYWLASLDPN
YMFSKPTPRTVKGPSLQSIISRCRVCRKPWEHGTAFVMASAEPEQGLKDVQLQQDTLSWL
DKLQDKQGSTEKQNLVDALYKLSTFLQGPTDSEKQEMKRRGLRARTRRPGCKFFFWKSWT
VC
NT seq 5049 nt   +upstreamnt  +downstreamnt
atgggaaagtctgtgtgggccgttcttctgatcctgtttgctgtgatgctgatgggcatc
ggggccaaaaattgtgtgtgcagtggaaaatcaaggtgccaatgtgaaggagtgaaaggc
agcaggggagagaaaggatttccaggagagcaaggtctcccggggctggagggccgtcca
ggatcaaatggtcacgctgggcctatgggaccaaagggcagcactgggcctggtggacct
gaggggccgaaaggagacccgggacctgagggcaaagaaggatttgctgggtctcatggt
ttaccgggtatcccaggtttgcaaggcccaccaggggccccaggggccccgggatgcaac
ggaacagatggagaagatggacctcctggtaatcccggggctcatggcattgacggacac
gcaggaccacctggtcagcccggacgtaagggagacaagggtatccgtggagggtatgga
ccacctgggagccctggaccacacggttctgacgggattcctggtcgtccaggggctcta
ggatccaagggtcaaggaggaatcggcagtgtccgaggacctcgtgggccaaagggcaga
gaaggaccagtcggcccgcccgggccgccaggtcaggtcaaggagtacgtccatgggagc
gacgtgttaaagtatagtaaaggagacagtggagatgctggagaaaagggctgcaagggt
acaacaggagaccctggttatggctctcacagcaaaggagcaaagggagataaaggaccg
gacggttcagaaatactcgggtttgtgactgaacctctaaaagggtaccctggagatcct
ggttccctgggccaacctgggctccctgggcgtcaaggtgttgttgggtttcctggacct
gacggacctccaggccaggcaactgggagttatgttccaggcctacagggcccccctggc
tttccaggccccaaaggagaccctggggatccgggggatcgttattcaggagttcccggt
ctggatggagatactggtgatcaagggccccctggcgatcagggcccacctggacctcct
gaagaccgaactaacagggtcaccaagggtctctcaggaataaagggagtaaagggattg
cctggacctctgggatatgatgggatatatggaatgaaaggagagaagggggagccttgt
tttgagtgtgccacatcaggaacgcccggaccgccggggccccgtggtccacctggcggc
cctggtgccaaccgaggaccaggtgcgaaaggtgatccaggatctccaggccctccaggc
cctcctggaacaccaggcctgaatggtggaagtgggtttccaggccctcctggaccgaag
ggagactcatcttcctaccacacccctgggataaagggagagacgggagacctgggacag
cctggcaggcctggcgcagatggcattcccgggtttccagggctgccaggtcgcaaaggt
gatcgagggcctccgggggattcgtacggcttccctggggcagagggagaccatggttac
ccaggtacaccagggcctacgggcagaccaggaccagttggctaccctgggccagagggg
tatgggcctgctggatttccaggaagtaaaggagattttggtgtacttggcctgccagga
cagcctggatttccaggccagaaaggggaaccaggtcatatccacatcagaggacttcct
ggacctcctggatttaaaggtcaacctggcattcctggaagcccgggccatcaaggactg
ccaggtaccccgggaataccaggttttccaggacagaaaggagaaggaggggacgtgtca
tatcctggaaggccagggaacgtaggaccaaaaggtgacaagggcgagccaggttctcta
ggcctccaacttgggggtttgcctgggcgcccaggtccacaaggtactcctggtgctcca
ggactgaagggtgatggtggccctggatactctggtccccaaggacccccagggcctcca
ggaccagacggaggtcaggggcctggaggagatcccggcatccctggccaacctgggaac
ccaggactaactggtcatcctggagttccaggagaaaaaggaaataaaggtcctgtaggc
ccccatggactacctggcgataaagactcttgcaaaggtgaacctggactgaggggacaa
ccaggaccagatggttatccaggacattcaggatcgaatggctcaccaggtgagaaaggg
aaagcaggtttgccagggtctggtcgtcctggcgcccctggtgatcccggtctcatcggg
ccatcagtaccaggtccacatgggcttcctggactaaaaggaagcaaaggacaaagcggc
ctgcctggccaaccaggactgagaggagaccttggaccagatgggatatcaggatatgga
ccagaaggacttcctggagtcccaggaccaccaggcccaatcggtgctcccggcccggat
gggacaagaggtcctccaggtctccaaggcatggagggggacccaggtcacagaggtcct
gctggccgttccgcacctccagacataatttctgggcccccagggtaccctggcgatcca
ggtcaacctggtctacctggtatccatggagaccctggaagaataggaccaccgggacag
agagggagagggggagcaccaggacaccctggaccaagaggtcccccgggtgatcgagct
agagatggaccaacttcagaagggaggccgggacttcccggagacccaggagacccagga
gttgcagggccttctggtccaaaaggcatcaaaggagatcaaggaatccctggcgctgtt
ggtcgagatggtgcaccaggtcccactggtcccaaaggagttcatggagagccaaactat
tatggatatggtcggcctggacccatgggacaaaagggcgaacctggattgaacaatgca
catgccccgaagggtcagaaaggtgaacctggtgtgtttggatcccccgctccaccagga
ttcactggagccaaagggaacccagggcctgtgggactaagtggtccacctggttaccaa
gggcataagggttcagatgggcctccaggaggaaaaggacgcctaggacctaatggaccg
ccaggtaacccgggtaacccaggtggcattggttacgctggtcctaaaggccaccagggt
cgggatgggatccctggaccaccagggcaaaaaggagagacgatctcaacagaagggaca
cctggcaggcgtggtgaaacaggtcaacaaggtccttctgggaaccctggtccccctggc
ttaactgtcccatcgccacctggaccgacaggagacagaggatcgtcaggtccaccaggg
ggctctggtccaaggggactaccaggaagagaaggcccttgtgttcctggatcaaaagga
ggccttggacgtcctgggacagctggaggaccaggctatcctggcccacctggacccccg
gggcccacaagtcctgggttaaaaggagaactaggggaccaaggtcgttctggaagccca
ggctatggtggaccccctggagatccaggtcctcaaggaccccctggtgtaagaggagga
cctggaggccccggaccaagaggtgaatttggtccccctggaatccaaggcccccctggt
gaaaaaggagaccctggatataactcaggcccgcctggtccacctgggataaaaggtttt
cctggaagacctggctcaaagggtcaaccagcatttggcgaggtgatatctgtacaggga
gatcctggttttctcggtccccctggaaataagggagccacagggagctctggatcatca
ggaccaccaggccaaccaggccggccaggcatcaaaggacagcgtggacctggccgagct
ggcctgccaggatttaccggccacaaaggagacaaaggaagatcaggactgccaggtttt
gagggacaacctggaagcccaggacacaagggtcgcccagggttgccaggcggagttggt
ccaggttatgtggacagtttcctgatagcaagacacagtcagagtatgcgtatacctgac
tgccctcctggcagcagcctcatgtactctggttactccttcctcttcattaatggcaat
gagagagctcacggtcaagacctcggttcctcgggaagttgtctccctcgattctccacc
atgcccttcatgttctgtgacacagaaagtaactgccgctacgcttctcgtaacgactac
tcctactggttgtccactgacacgcctatgcctgccaacatggtggccatcgcaggggac
aggctggcatcttacatcagcaggtgctccgtgtgtgagatcacctccaatgtcatagcc
atgcacagccagacaactctgatacctgagtgtccccgaggctgggagtccctgtggact
ggatactcatttgtcatgcaaacaggtgctggagcagagggctcctctcagccgctggtt
tctcccggctcatgtctggaaagtttccgccaagtgcccttcatcgagtgtcacggcaga
gggacatgtaactactaccctgattcctacagctactggctggcctccctggaccccaac
tacatgttcagtaaaccaactcctcggacagtgaagggaccttctctacaaagtatcatc
agccgttgtcgagtctgcaggaaaccatgggaacatgggaccgcatttgttatggcaagt
gcagagccagagcagggattaaaagatgtccaacttcaacaagacacattgtcgtggctc
gacaaactacaggacaaacagggatcgacagagaaacagaacttggtggacgcgctatac
aagctctccacattcctccaaggcccgacagactcagagaaacaggagatgaagagacga
ggcctgagagctcggacccgcagacccggctgcaaattcttcttctggaaatcctggact
gtctgctaa

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