Semicossyphus pulcher (California sheephead): 138611308
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Entry
138611308 CDS
T10596
Symbol
rb1cc1
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
spul Semicossyphus pulcher (California sheephead)
Pathway
spul04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
spul00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
138611308 (rb1cc1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
spul01009
]
138611308 (rb1cc1)
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spul04131
]
138611308 (rb1cc1)
03029 Mitochondrial biogenesis [BR:
spul03029
]
138611308 (rb1cc1)
Protein phosphatases and associated proteins [BR:
spul01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
138611308 (rb1cc1)
Membrane trafficking [BR:
spul04131
]
Autophagy
Autophagosome formation proteins
ULK complex
138611308 (rb1cc1)
Mitochondrial biogenesis [BR:
spul03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
138611308 (rb1cc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
TMF_DNA_bd
ubiquitin
Motif
Other DBs
NCBI-GeneID:
138611308
NCBI-ProteinID:
XP_069540435
LinkDB
All DBs
Position
Unknown
AA seq
1622 aa
AA seq
DB search
MKLYVFQVNNGSTLTFDTDLAVQTVLELKHAIQAKYKIAIQHQVLVVNGGECMAAERRVC
SYSAGTETNPIFLFNKEMILCDRDPTIPKTTFSIESEIQVKVEESLLMPAVFHTVASRTQ
LALEMFEVANKLSSFCERLVHDEHLQHQGWAAIMANLDDCTLSYQKLLVRFDTSYTNYQR
DLEEIKVKLTKLGTAVSVMARIPLLECLTRHSYRESMEKSSSTPGKDSDETEEEKSTDSV
RCTADPQRPSKLSASLSASGTPTCEQTGDQETNEMTDSGGLRAALLDDDTPEFANPSAFN
VTLLDWINVQDRPNDVESVVRKCFDSINRLDPRIIQPFLTDCRDTISKLDNQNMKAIKGL
EDRLYALDQMIASCKKLVNEQKELAQGFLANQKRAENLKDTSVLPDLCLSHTNQLMIMLN
NHRKLLDIKKKCTTAKQELANNLQVRLKWCCYVMLHADQDGEKLQALLRLLTELMERVRV
VEALSTVPQMYCLAVVEVVRRKMFMRHYREWAYALVKDGKLLYEAEKFKRESFGKLFRKS
FLRNRLFRGLDSWPPTSFCTRKPRRFDDELPDISVDDLQYLKSCCPLEVQPFLMLPTMCD
FEPLNRHVETLQQLVQAAQSVDEMSQTITDLLSEQRISYSQRSTVLTPQSESIPGTSTQM
SSKTPSSLSLQGPSCQPLHVPVPAPLEDLSPDSIDAQTFDFETIGHPNMDPVLQQGSLDL
DSLAESPESDFMSAVNEFVIEENLTSPNPISDPTSPEMMVESLYSSVINAIDNKRMQDTT
ILERENSKIAVLKHVIDKYRSAAEESHSNLRSVKDDLCHLRGLVFKEQDDFGFVLRSMST
EVHNIVDNISQTHERKLKEQHQSELLALRQELEKQVQTLNEENQVNQNIVRDVQHAMLEL
EGLMERKEKELTQLENEKERWAEKESNQTDRIKHLDQKISDQAQEIKALSVSKDSLTSQL
ENLHFEIERSQQKIRQELEVVEQVHLKEMEDRMQQEHRAELETFTKKNQEALEHLAAENS
AKLSEAADHHATALREKDNLIKDLEARVTELAELRCKLEVELALKESETEEMKLLLEEEK
MQQTETLKFQVEAETKVLSEELANLKKQLQVKNEEYEVDLAELRTLMRIEKDHCISELVE
RHEEETILLRTELSSLQQQAQDAERNHTEQQLKLKQESDQRVAAQTEEQEKLQKSFQELE
QELRTVISNLQAENDLLSHKLDQDRDRRAAEKDLEKEEASKVALQDAFKELEQQKEEMER
RLSGKIKQLENELHERQSSTSEEGLSLHAEGHADSGAPLSLDSALQERLQQERASLQSQM
ELMEKKKNEEIQNLKTSLIAEQQTNFNTVLTREKLKKEQIINELTEKLQKVTQQQDKDKA
LIETLSEDRASVMQEKKHLEEELNRLRSTALIASTFFTHNPSAQEVTEGGAAAARAPPVA
GACSSEPMTETDRLASVAAIRDDEHVDSAVEASMVTVHDNILMSEEKQRILLLERTLHMK
EEENKRLSQRLMSQSMSSVSSRHSDKIAIRDFQVGDLVLIILDERHDNYVLFTVGPTLYF
LHSESLTALDLKPASGTSRRPWVLGKVMEKEYCQAKKAQNRFKVPLGTKFYRVKAVPWNR
KV
NT seq
4869 nt
NT seq
+upstream
nt +downstream
nt
atgaagttgtatgtgttccaggtcaacaatggcagcacattgacatttgacacagatctt
gctgtccaaactgtactggagctcaaacatgccatccaagccaaatacaagattgcaatt
caacatcaagtccttgttgtcaatggaggggaatgtatggctgcagagaggcgcgtctgc
agctacagtgctggcactgaaaccaaccccatatttctgttcaacaaagagatgatcttg
tgtgaccgggatccaacgatccccaaaaccaccttctcgattgagagtgagattcaggtt
aaggtggaggagtctctactgatgccagctgtctttcacaccgttgcctcgcgaacccaa
cttgctctggaaatgtttgaagttgccaacaaacttagctctttctgtgaacgtttggtt
cacgatgaacaccttcaacaccaaggctgggctgctattatggctaatctggacgactgc
actctgtcatatcagaagctgcttgtgagatttgacacttcatacacaaattatcaacgt
gatctggaagaaattaaagtaaaacttacaaagttagggacagcagtttccgtcatggcc
aggatacctctgctggaatgtttgacgagacacagttacagagagagcatggagaagtca
agctcaaccccgggaaaggattcagatgagacagaggaagaaaaatccacagactctgtt
cgctgcacagcagatccacagaggccctccaagttatcagcctccctctctgcttctggg
acacccacgtgtgagcaaactggagaccaggaaacaaacgaaatgactgacagtggtgga
ctgagagctgcgctcttagacgatgacactccagagttcgccaacccgtccgccttcaat
gttacactattagactggatcaatgtacaagacaggcccaatgatgtggaatcggtagta
agaaagtgctttgactccatcaacaggcttgacccacggatcattcagcccttcctgaca
gattgtcgtgacacaatttccaagctagataatcaaaacatgaaagccatcaaggggctt
gaggatcggttgtatgctctagaccaaatgattgcaagctgcaagaagttagtaaatgaa
cagaaagaacttgctcagggatttttggccaatcagaagcgggctgaaaacctgaaggat
acatctgttctgcctgacttgtgtctgagtcacacaaaccagctgatgatcatgctgaac
aaccacaggaagctgctagacatcaaaaagaagtgcaccactgccaaacaagaacttgca
aacaaccttcaagttcgactcaaatggtgctgctacgtgatgctccatgcagaccaggat
ggagagaagcttcaggctcttctcagactcctgacagagctaatggaaagggtgagggtg
gtggaggccctcagcaccgtgccccagatgtactgcttggcagtggtggaggtcgtcagg
agaaaaatgtttatgcgccactacagagagtgggcttatgcgctcgtgaaggatgggaaa
ctactgtacgaggccgagaagttcaaaagggaatcctttgggaaactctttagaaagtct
ttcctcagaaatcgtttgtttagaggacttgattcatggcctccaacatcattttgtaca
cgaaagccccgaaggtttgacgatgaacttccagacatctcagttgacgacctgcagtac
ttgaaatcttgttgtcctttagaggtgcagcctttcctcatgctacccacaatgtgtgac
ttcgagcccttaaatcgccatgtagagacgcttcagcagctggtccaagctgcacagagt
gtggatgagatgtctcaaactattactgacctgctcagtgaacaaaggatatcctacagt
cagagatcaaccgtgttgaccccacagtctgaaagcattcctgggacctcaacacagatg
tcctccaaaaccccttcctctctcagccttcaaggacccagctgccagcccctacacgtt
cccgtcccggctcctctggaggacttgtccccagacagcatagatgcacaaacatttgac
tttgaaaccatcggccatccgaacatggatcctgtcctgcagcagggctcgctcgacttg
gactctctagcagagagccctgaatctgacttcatgtctgccgttaatgagtttgtgatt
gaagagaacctgacctctccgaaccccatcagtgatcctaccagccctgagatgatggtg
gagtcgctgtactcttcagtcatcaacgctatcgacaacaagcgcatgcaggacaccacg
atactggagagggagaactccaagattgctgttctcaaacacgttattgacaagtaccga
tctgctgcagaggagtcccattcaaacttaaggagcgttaaggatgacctctgtcactta
agaggcctggtatttaaagaacaagatgactttggctttgtcttaaggagcatgtccaca
gaggtgcacaacattgtggacaacatcagtcagacccacgaacggaaattaaaggagcag
catcaaagtgagcttcttgcccttcgacaagagctggagaagcaggttcaaacactaaac
gaggaaaaccaagtaaaccagaatattgtcagagatgtccagcacgcaatgctggagctg
gaggggctcatggagcgcaaagagaaagaacttactcagcttgagaacgaaaaagagcga
tgggctgagaaggagagtaaccagacagacaggatcaaacacctggaccagaagatcagc
gatcaagctcaagagatcaaagcgctctctgtttcgaaagactctctgaccagtcagctt
gagaatctgcactttgagattgaacgcagccagcagaagatccggcaggagttggaagtt
gttgagcaggtgcacttaaaagagatggaggacagaatgcagcaggaacaccgggcagag
ttggagacttttaccaagaaaaaccaggaagctctggagcatctggctgctgaaaacagt
gcgaagttaagcgaggcagcggatcaccatgccactgcacttagagagaaggacaactta
attaaggacttggaggctcgtgttaccgagcttgcagagctccgctgcaaactcgaggtg
gagttagccctcaaagagtcagagacagaggagatgaagctcttacttgaggaagaaaag
atgcagcagactgagacactgaagttccaggtagaggcggagaccaaagttctcagtgag
gagctggcgaatctcaaaaaacagcttcaggtaaaaaatgaggagtatgaagtggaccta
gctgagctgaggactctcatgaggattgagaaggaccactgcatttccgagttggtggag
agacatgaggaggagactattttgttgcgcactgagctctcctccctgcagcagcaagcc
caggatgctgagcggaaccatactgagcaacagctgaaacttaagcaggaatccgaccag
cgagtggccgctcagactgaagaacaagaaaagctgcagaagagtttccaagaattggag
caagagctgaggactgttatcagcaatttgcaggcagaaaatgatctgctgtctcacaag
ctagatcaggacagagacagacgagcagctgagaaagatttggagaaagaggaggcctct
aaagtggcattgcaagatgcctttaaagagttagagcagcagaaagaggagatggagagg
agactgtcaggcaaaattaaacagcttgagaatgagcttcatgagagacaatcctccaca
agtgaagaaggcttgtcgctgcatgccgaaggccacgcagattctggagcacctctgtct
ctagactctgcactacaagagcggctgcagcaggagagagcctccctgcagtcccagatg
gagctcatggagaagaagaagaatgaggagatacagaacctcaagacatcactaatcgca
gagcagcagactaatttcaacactgttctaacacgagagaagctgaagaaggagcagatc
atcaatgagctgacagagaagttgcagaaggttacccagcagcaggacaaggacaaagct
ctgatagagaccctctctgaggaccgagcaagtgtcatgcaggagaagaaacacttggaa
gaagagctgaaccgcctgcgcagcactgcactgatcgcctccaccttctttacccataac
ccctcagctcaggaggtcacagaaggtggagcagcagcagctagagctccgcctgttgct
ggggcttgttcctctgagcccatgactgaaactgacagactggcctctgtggcagccatt
cgagatgacgaacacgttgattcagcggtggaggccagcatggtgacagtccatgataac
atcctgatgtcggaggagaaacagcggatactcctacttgaaaggactttacacatgaag
gaagaagaaaacaagcgcctcagtcaaagactgatgtctcaaagcatgtcgtctgtgtct
tcacggcattcagacaaaatcgccatcagagatttccaggtaggcgatttggttctaatc
atcctggatgaaaggcatgacaactacgtgctgttcacagttggtcccaccctctacttc
ctccactcagagtctctcactgcactggacctcaaaccagcatcagggacatcaagacgg
ccgtgggtgcttggaaaggtgatggagaaggaatattgccaggcaaaaaaggcccagaac
aggttcaaggttcctttaggaaccaagttctacagagtgaaagctgttccatggaacaga
aaagtataa
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integrated database retrieval system
